Genomic map of Pseudomonas phage PaMx73 (JQ067085)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
JQ067085
Definition
Pseudomonas phage PaMx73, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Casadabanvirus; Pseudomonas virus D3112.
DB of origin
PVOG
Length
36570
Host Name
Pseudomonas aeruginosa
Host domain
Bacteria
Is prophage?
undef
Number of proteins
56
%GC
64.19
Number of singletons
1
Number of paralogs
1

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
AII21872.1 JQ067085_p30 virion morphogenesis protein phrog_26 tail completion or Neck1 protein connector 1 17138 17605
AII21880.1 JQ067085_p22 hypothetical protein phrog_2975 Rz-like spanin lysis 1 10882 11283
AII21889.1 JQ067085_p13 hypothetical protein phrog_16970 unknown function unknown function 1 7041 7487
AII21848.1 JQ067085_p54 hypothetical protein phrog_2875 virion structural protein head and packaging 1 34748 35896
AII21877.1 JQ067085_p25 hypothetical protein phrog_756 DNA binding protein DNA, RNA and nucleotide metabolism 1 11591 12091
AII21884.1 JQ067085_p18 hypothetical protein phrog_3648 unknown function unknown function 1 9465 9812
AII21868.1 JQ067085_p34 hypothetical protein singleton unknown function unknown function -1 18557 18637
AII21879.1 JQ067085_p23 hypothetical protein phrog_8661 unknown function unknown function 1 11276 11389
AII21866.1 JQ067085_p36 Virion structural protein phrog_1731 virion structural protein head and packaging 1 19761 20159
AII21870.1 JQ067085_p32 type I-F anti-CRISPR protein phrog_9769 type I-F anti-CRISPR protein moron, auxiliary metabolic gene and host takeover 1 17912 18214
AII21871.1 JQ067085_p31 type I-E anti-CRISPR protein phrog_8786 type I-E anti-CRISPR protein moron, auxiliary metabolic gene and host takeover 1 17718 17915
AII21849.1 JQ067085_p53 Virion structural protein phrog_1101 tail protein tail 1 32544 34751
AII21858.1 JQ067085_p44 hypothetical protein phrog_1442 tail assembly chaperone tail 1 23513 23998
AII21873.1 JQ067085_p29 virion morphogenesis protein phrog_220 minor head protein and DNA pilot head and packaging 1 15852 17138
AII21896.1 JQ067085_p6 transposase B phrog_296 DNA transposition protein integration and excision 1 4101 4871
AII21881.1 JQ067085_p21 hypothetical protein phrog_4057 unknown function unknown function 1 10643 10885
AII21852.1 JQ067085_p50 Viron structural protein phrog_778 tail assembly protein tail 1 31270 32091
AII21862.1 JQ067085_p40 hypothetical protein phrog_195 head-tail adaptor connector 1 21647 22063
AII21878.1 JQ067085_p24 hypothetical protein phrog_1103 unknown function unknown function 1 11394 11582
AII21898.1 JQ067085_p4 hypothetical protein phrog_4468 unknown function unknown function 1 1845 2042
AII21899.1 JQ067085_p3 hypothetical protein phrog_2345 transcriptional regulator transcription regulation 1 1411 1845
AII21886.1 JQ067085_p16 GemA phrog_286 unknown function unknown function 1 8519 8920
AII21891.1 JQ067085_p11 host nuclease inhibitor protein phrog_491 Mu Gam-like end protection DNA, RNA and nucleotide metabolism 1 6320 6838
AII21865.1 JQ067085_p37 major head subunit protein phrog_371 major head protein head and packaging 1 20187 21095
AII21894.1 JQ067085_p8 hypothetical protein phrog_3765 unknown function unknown function 1 5500 5616
AII21867.1 JQ067085_p35 protease (I) and scaffold (Z) protein phrog_328 head maturation protease head and packaging 1 18645 19751
AII21883.1 JQ067085_p19 hypothetical protein phrog_1024 unknown function unknown function 1 9805 10227
AII21875.1 JQ067085_p27 terminase large subunit phrog_38 terminase large subunit head and packaging 1 12599 14254
AII21857.1 JQ067085_p45 hypothetical protein phrog_10839 unknown function unknown function 1 23998 24126
AII21869.1 JQ067085_p33 DNA-binding domain-containing protein phrog_3865 unknown function unknown function 1 18201 18425
AII21890.1 JQ067085_p12 hypothetical protein phrog_10427 unknown function unknown function 1 6838 7041
AII21895.1 JQ067085_p7 DNA-binding domain-containing protein phrog_2030 transcriptional regulator transcription regulation 1 4868 5515
AII21851.1 JQ067085_p51 hypothetical protein phrog_1180 tail assembly chaperone tail 1 32100 32339
AII21854.1 JQ067085_p48 Virion structural protein phrog_687 structural protein head and packaging 1 28654 29577
AII21847.1 JQ067085_p55 hypothetical protein phrog_2432 unknown function unknown function 1 35893 36180
AII21887.1 JQ067085_p15 hypothetical protein phrog_3652 unknown function unknown function 1 7945 8214
AII21860.1 JQ067085_p42 hypothetical protein phrog_3129 unknown function unknown function 1 22527 22706
AII21861.1 JQ067085_p41 Virion structural protein phrog_209 portal protein head and packaging 1 22060 22539
AII21893.1 JQ067085_p9 hypothetical protein phrog_2119 unknown function unknown function 1 5616 6029
AII21885.1 JQ067085_p17 Mor transcription activator phrog_836 late transcriptional activator transcription regulation 1 8913 9362
AII21897.1 JQ067085_p5 transposase A phrog_310 transposase integration and excision 1 2035 4104
AII21876.1 JQ067085_p26 hypothetical protein phrog_1244 unknown function unknown function -1 12094 12600
AII21850.1 JQ067085_p52 hypothetical protein phrog_1196 tail assembly chaperone tail 1 32336 32554
AII21888.1 JQ067085_p14 hypothetical protein phrog_5249 unknown function unknown function 1 7487 7936
AII21900.1 JQ067085_p2 Ner-like protein phrog_769 transcriptional repressor transcription regulation 1 1052 1408
AII21864.1 JQ067085_p38 hypothetical protein phrog_7976 unknown function unknown function 1 21110 21412
AII21901.1 JQ067085_p1 repressor phrog_4 transcriptional repressor transcription regulation -1 170 883
AII21892.1 JQ067085_p10 hypothetical protein phrog_2043 unknown function unknown function 1 6019 6303
AII21859.1 JQ067085_p43 Virion structural protein phrog_807 major tail protein with Ig-like domain tail 1 22739 23509
AII21846.1 JQ067085_p56 hypothetical protein phrog_2623 unknown function unknown function 1 36259 36483
AII21863.1 JQ067085_p39 hypothetical protein phrog_3376 unknown function unknown function 1 21447 21650
AII21856.1 JQ067085_p46 tail length tape measure protein phrog_24 tail length tape measure protein tail 1 24123 27689
AII21874.1 JQ067085_p28 portal protein phrog_113 portal protein head and packaging 1 14266 15852
AII21855.1 JQ067085_p47 Virion structural protein phrog_687 structural protein head and packaging 1 27696 28652
AII21853.1 JQ067085_p49 Virion structural protein phrog_1082 tail assembly protein tail 1 29577 31280
AII21882.1 JQ067085_p20 hypothetical protein phrog_873 endolysin head and packaging 1 10227 10643