| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
JQ300538 |
Definition |
Mycobacterium phage Spartacus, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Cheoctovirus; Mycobacterium virus Spartacus. |
DB of origin |
PVOG |
Length |
61164 |
Host Name |
Mycobacterium smegmatis |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
110 |
%GC |
61.65 |
Number of singletons |
2 |
Number of paralogs |
3 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| AFA45072.1 | JQ300538_p64 | hypothetical protein | phrog_1834 | unknown function | unknown function | 1 | 41404 | 41634 |
| AFA45099.1 | JQ300538_p91 | hypothetical protein | phrog_4152 | unknown function | unknown function | 1 | 52843 | 52971 |
| AFA45023.1 | JQ300538_p15 | minor tail subunit | phrog_106 | minor tail protein | tail | 1 | 13042 | 14751 |
| AFA45033.1 | JQ300538_p25 | hypothetical protein | phrog_754 | minor tail protein | tail | 1 | 24348 | 25328 |
| AFA45034.1 | JQ300538_p26 | HTH DNA binding domain protein | phrog_686 | HTH DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 25332 | 25463 |
| AFA45061.1 | JQ300538_p53 | hypothetical protein | phrog_1816 | unknown function | unknown function | 1 | 37262 | 37453 |
| AFA45111.1 | JQ300538_p103 | hypothetical protein | phrog_1694 | unknown function | unknown function | 1 | 56424 | 56582 |
| AFA45067.1 | JQ300538_p59 | WhiB | phrog_1333 | unknown function | unknown function | 1 | 39633 | 40127 |
| AFA45038.1 | JQ300538_p30 | hypothetical protein | phrog_747 | unknown function | unknown function | 1 | 26350 | 26571 |
| AFA45105.1 | JQ300538_p97 | hypothetical protein | phrog_2278 | unknown function | unknown function | 1 | 54089 | 54307 |
| AFA45027.1 | JQ300538_p19 | minor tail subunit | phrog_346 | minor tail protein | tail | 1 | 17481 | 20018 |
| AFA45010.1 | JQ300538_p2 | terminase large subunit | phrog_9 | terminase large subunit | head and packaging | 1 | 575 | 2212 |
| AFA45078.1 | JQ300538_p70 | helicase domain protein | phrog_16 | DNA helicase | DNA, RNA and nucleotide metabolism | 1 | 43606 | 46155 |
| AFA45087.1 | JQ300538_p79 | hypothetical protein | phrog_4296 | unknown function | unknown function | 1 | 49494 | 49856 |
| AFA45080.1 | JQ300538_p72 | hypothetical protein | phrog_2704 | unknown function | unknown function | 1 | 46369 | 46518 |
| AFA45053.1 | JQ300538_p45 | repressor | phrog_3949 | transcriptional repressor | transcription regulation | -1 | 33935 | 34426 |
| AFA45077.1 | JQ300538_p69 | hypothetical protein | singleton | unknown function | unknown function | 1 | 43502 | 43609 |
| AFA45075.1 | JQ300538_p67 | HNH endonuclease | phrog_740 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 42463 | 42825 |
| AFA45113.1 | JQ300538_p105 | hypothetical protein | phrog_1186 | unknown function | unknown function | 1 | 56830 | 57231 |
| AFA45076.1 | JQ300538_p68 | hypothetical protein | phrog_2233 | unknown function | unknown function | 1 | 42822 | 43505 |
| AFA45042.1 | JQ300538_p34 | holin | phrog_443 | holin | lysis | 1 | 29042 | 29275 |
| AFA45106.1 | JQ300538_p98 | hypothetical protein | phrog_6816 | unknown function | unknown function | 1 | 54307 | 54549 |
| AFA45068.1 | JQ300538_p60 | hypothetical protein | phrog_2096 | unknown function | unknown function | 1 | 40124 | 40609 |
| AFA45089.1 | JQ300538_p81 | hypothetical protein | phrog_14414 | unknown function | unknown function | 1 | 50153 | 50353 |
| AFA45036.1 | JQ300538_p28 | hypothetical protein | phrog_932 | unknown function | unknown function | 1 | 25965 | 26111 |
| AFA45114.1 | JQ300538_p106 | hypothetical protein | phrog_1385 | unknown function | unknown function | 1 | 57228 | 57470 |
| AFA45021.1 | JQ300538_p13 | tail assembly chaperone | phrog_621 | tail assembly chaperone | tail | 1 | 8563 | 9114 |
| AFA45062.1 | JQ300538_p54 | hypothetical protein | phrog_3381 | unknown function | unknown function | 1 | 37450 | 37626 |
| AFA45108.1 | JQ300538_p100 | hypothetical protein | phrog_908 | unknown function | unknown function | 1 | 54815 | 55489 |
| AFA45094.1 | JQ300538_p86 | hypothetical protein | phrog_14505 | unknown function | unknown function | 1 | 51353 | 51568 |
| AFA45104.1 | JQ300538_p96 | hypothetical protein | phrog_6676 | unknown function | unknown function | 1 | 53635 | 54033 |
| AFA45056.1 | JQ300538_p48 | hypothetical protein | phrog_14857 | HTH DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 35829 | 36197 |
| AFA45109.1 | JQ300538_p101 | hypothetical protein | phrog_8604 | unknown function | unknown function | 1 | 55500 | 56126 |
| AFA45115.1 | JQ300538_p107 | hypothetical protein | phrog_2057 | unknown function | unknown function | 1 | 57463 | 57624 |
| AFA45118.1 | JQ300538_p110 | N-acetylglucosaminotransferase | phrog_854 | glucosyltransferase | moron, auxiliary metabolic gene and host takeover | 1 | 59296 | 59919 |
| AFA45044.1 | JQ300538_p36 | hypothetical protein | phrog_2004 | unknown function | unknown function | 1 | 29671 | 29904 |
| AFA45091.1 | JQ300538_p83 | HTH binding domain protein | phrog_2939 | unknown function | unknown function | 1 | 50534 | 50815 |
| AFA45065.1 | JQ300538_p57 | hypothetical protein | phrog_1849 | unknown function | unknown function | 1 | 39008 | 39289 |
| AFA45090.1 | JQ300538_p82 | hypothetical protein | phrog_1943 | unknown function | unknown function | 1 | 50350 | 50550 |
| AFA45088.1 | JQ300538_p80 | hypothetical protein | phrog_2080 | unknown function | unknown function | 1 | 49849 | 50073 |
| AFA45054.1 | JQ300538_p46 | HTH DNA binding domain protein | phrog_3642 | HTH DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 34659 | 34904 |
| AFA45013.1 | JQ300538_p5 | scaffolding protein | phrog_2592 | head scaffolding protein | head and packaging | 1 | 4381 | 5031 |
| AFA45015.1 | JQ300538_p7 | hypothetical protein | phrog_2377 | head-tail adaptor Ad1 | connector | 1 | 5871 | 6437 |
| AFA45050.1 | JQ300538_p42 | toxin/antitoxin | phrog_1213 | RelE-like toxin | moron, auxiliary metabolic gene and host takeover | 1 | 32647 | 32958 |
| AFA45039.1 | JQ300538_p31 | hypothetical protein | phrog_5492 | unknown function | unknown function | 1 | 26568 | 26741 |
| AFA45085.1 | JQ300538_p77 | hypothetical protein | phrog_5500 | unknown function | unknown function | 1 | 48377 | 48595 |
| AFA45045.1 | JQ300538_p37 | DnaQ-like protein | phrog_403 | DNA polymerase exonuclease subunit | DNA, RNA and nucleotide metabolism | 1 | 29891 | 30712 |
| AFA45095.1 | JQ300538_p87 | hypothetical protein | phrog_647 | unknown function | unknown function | 1 | 51565 | 51846 |
| AFA45086.1 | JQ300538_p78 | hypothetical protein | phrog_2149 | replication initiation protein | DNA, RNA and nucleotide metabolism | 1 | 48592 | 49497 |
| AFA45096.1 | JQ300538_p88 | hypothetical protein | phrog_2021 | unknown function | unknown function | 1 | 51839 | 52264 |
| AFA45022.1 | JQ300538_p14 | tapemeasure protein | phrog_1942 | tail length tape measure protein | tail | 1 | 9517 | 13041 |
| AFA45074.1 | JQ300538_p66 | hypothetical protein | phrog_3290 | single strand annealing protein | DNA, RNA and nucleotide metabolism | 1 | 41888 | 42466 |
| AFA45028.1 | JQ300538_p20 | D-Ala-D-Ala carboxypeptidase | phrog_382 | minor tail protein with lysin activity | tail | 1 | 20015 | 21901 |
| AFA45098.1 | JQ300538_p90 | hypothetical protein | phrog_647 | unknown function | unknown function | 1 | 52535 | 52846 |
| AFA45049.1 | JQ300538_p41 | integrase | phrog_1 | integrase | integration and excision | 1 | 31407 | 32525 |
| AFA45029.1 | JQ300538_p21 | hypothetical protein | phrog_2106 | minor tail protein | tail | 1 | 21904 | 23064 |
| AFA45047.1 | JQ300538_p39 | hypothetical protein | phrog_1791 | unknown function | unknown function | 1 | 30803 | 31021 |
| AFA45060.1 | JQ300538_p52 | DNA binding domain protein | phrog_1840 | excisionase | integration and excision | 1 | 37005 | 37265 |
| AFA45011.1 | JQ300538_p3 | portal protein | phrog_104 | portal protein | head and packaging | 1 | 2243 | 3613 |
| AFA45079.1 | JQ300538_p71 | hypothetical protein | phrog_10510 | unknown function | unknown function | 1 | 46163 | 46372 |
| AFA45043.1 | JQ300538_p35 | hypothetical protein | phrog_404 | minor tail protein | tail | 1 | 29272 | 29646 |
| AFA45082.1 | JQ300538_p74 | DNA methylase | phrog_116 | DNA methyltransferase | other | 1 | 46658 | 48085 |
| AFA45012.1 | JQ300538_p4 | capsid maturation protease | phrog_1522 | head maturation protease | head and packaging | 1 | 3600 | 4355 |
| AFA45030.1 | JQ300538_p22 | hypothetical protein | phrog_240 | head protein | head and packaging | 1 | 23082 | 23423 |
| AFA45026.1 | JQ300538_p18 | hypothetical protein | phrog_732 | minor tail protein | tail | 1 | 16654 | 17484 |
| AFA45100.1 | JQ300538_p92 | hypothetical protein | phrog_1901 | unknown function | unknown function | 1 | 52968 | 53159 |
| AFA45093.1 | JQ300538_p85 | hypothetical protein | phrog_1546 | unknown function | unknown function | 1 | 51000 | 51356 |
| AFA45016.1 | JQ300538_p8 | hypothetical protein | phrog_763 | head-tail adaptor | connector | 1 | 6434 | 6766 |
| AFA45018.1 | JQ300538_p10 | hypothetical protein | phrog_813 | head-tail adaptor | connector | 1 | 7083 | 7490 |
| AFA45117.1 | JQ300538_p109 | hypothetical protein | phrog_1693 | unknown function | unknown function | 1 | 59093 | 59299 |
| AFA45112.1 | JQ300538_p104 | hypothetical protein | phrog_3813 | unknown function | unknown function | 1 | 56579 | 56833 |
| AFA45081.1 | JQ300538_p73 | hypothetical protein | phrog_2070 | unknown function | unknown function | 1 | 46515 | 46664 |
| AFA45055.1 | JQ300538_p47 | antirepressor | phrog_130 | anti-repressor Ant | transcription regulation | 1 | 34966 | 35832 |
| AFA45046.1 | JQ300538_p38 | hypothetical protein | phrog_8186 | unknown function | unknown function | 1 | 30709 | 30813 |
| AFA45014.1 | JQ300538_p6 | capsid protein | phrog_267 | major head protein | head and packaging | 1 | 5050 | 5871 |
| AFA45071.1 | JQ300538_p63 | hypothetical protein | phrog_2078 | unknown function | unknown function | 1 | 41246 | 41404 |
| AFA45040.1 | JQ300538_p32 | lysin A | phrog_700 | endolysin | lysis | 1 | 26738 | 28030 |
| AFA45083.1 | JQ300538_p75 | hypothetical protein | phrog_1311 | unknown function | unknown function | 1 | 48082 | 48258 |
| AFA45048.1 | JQ300538_p40 | hypothetical protein | phrog_1839 | unknown function | unknown function | 1 | 31014 | 31106 |
| AFA45020.1 | JQ300538_p12 | tail assembly chaperone | phrog_978 | tail assembly chaperone | tail | 1 | 8563 | 9499 |
| AFA45024.1 | JQ300538_p16 | minor tail subunit | phrog_20512 | minor tail protein | tail | 1 | 14836 | 16068 |
| AFA45092.1 | JQ300538_p84 | hypothetical protein | phrog_1901 | unknown function | unknown function | 1 | 50812 | 51003 |
| AFA45059.1 | JQ300538_p51 | hypothetical protein | phrog_2025 | unknown function | unknown function | 1 | 36704 | 36916 |
| AFA45073.1 | JQ300538_p65 | hypothetical protein | phrog_2632 | unknown function | unknown function | 1 | 41631 | 41891 |
| AFA45103.1 | JQ300538_p95 | hypothetical protein | phrog_1545 | unknown function | unknown function | 1 | 53498 | 53638 |
| AFA45057.1 | JQ300538_p49 | hypothetical protein | singleton | unknown function | unknown function | 1 | 36331 | 36411 |
| AFA45107.1 | JQ300538_p99 | hypothetical protein | phrog_2247 | unknown function | unknown function | 1 | 54546 | 54818 |
| AFA45035.1 | JQ300538_p27 | hypothetical protein | phrog_411 | unknown function | unknown function | 1 | 25674 | 25958 |
| AFA45009.1 | JQ300538_p1 | terminase small subunit | phrog_226 | minor tail protein | tail | 1 | 112 | 567 |
| AFA45101.1 | JQ300538_p93 | hypothetical protein | phrog_10718 | unknown function | unknown function | 1 | 53156 | 53317 |
| AFA45063.1 | JQ300538_p55 | hypothetical protein | phrog_1797 | unknown function | unknown function | 1 | 37623 | 38033 |
| AFA45052.1 | JQ300538_p44 | hypothetical protein | phrog_1948 | unknown function | unknown function | -1 | 33214 | 33702 |
| AFA45051.1 | JQ300538_p43 | toxin/antitoxin | phrog_2268 | antitoxin from a toxin-antitoxin system | moron, auxiliary metabolic gene and host takeover | 1 | 32955 | 33203 |
| AFA45019.1 | JQ300538_p11 | major tail subunit | phrog_476 | major tail protein | tail | 1 | 7617 | 8426 |
| AFA45102.1 | JQ300538_p94 | hypothetical protein | phrog_1091 | unknown function | unknown function | 1 | 53310 | 53501 |
| AFA45041.1 | JQ300538_p33 | lysin B | phrog_102 | endolysin | lysis | 1 | 28027 | 29028 |
| AFA45070.1 | JQ300538_p62 | HTH DNA binding domain protein | phrog_664 | DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 40884 | 41249 |
| AFA45058.1 | JQ300538_p50 | hypothetical protein | phrog_5253 | unknown function | unknown function | 1 | 36408 | 36707 |
| AFA45064.1 | JQ300538_p56 | hypothetical protein | phrog_3416 | unknown function | unknown function | 1 | 38115 | 38927 |
| AFA45017.1 | JQ300538_p9 | hypothetical protein | phrog_1929 | head-tail connector protein | connector | 1 | 6767 | 7093 |
| AFA45116.1 | JQ300538_p108 | polypeptide N-acetylgalactosaminyltransferase | phrog_1579 | glycosyltransferase | moron, auxiliary metabolic gene and host takeover | 1 | 57651 | 59090 |
| AFA45066.1 | JQ300538_p58 | hypothetical protein | phrog_658 | unknown function | unknown function | 1 | 39286 | 39633 |
| AFA45084.1 | JQ300538_p76 | hypothetical protein | phrog_6193 | unknown function | unknown function | 1 | 48255 | 48380 |
| AFA45097.1 | JQ300538_p89 | hypothetical protein | phrog_647 | unknown function | unknown function | 1 | 52261 | 52542 |
| AFA45110.1 | JQ300538_p102 | hypothetical protein | phrog_1869 | unknown function | unknown function | 1 | 56254 | 56418 |
| AFA45025.1 | JQ300538_p17 | hypothetical protein | phrog_18875 | minor tail protein | tail | 1 | 16068 | 16598 |
| AFA45069.1 | JQ300538_p61 | WhiB | phrog_472 | WhiB transcriptional factor | transcription regulation | 1 | 40606 | 40887 |
| AFA45037.1 | JQ300538_p29 | hypothetical protein | phrog_1172 | unknown function | unknown function | 1 | 26108 | 26275 |
| AFA45032.1 | JQ300538_p24 | hypothetical protein | phrog_2012 | minor tail protein | tail | 1 | 23713 | 24351 |
| AFA45031.1 | JQ300538_p23 | hypothetical protein | phrog_2005 | minor tail protein | tail | 1 | 23442 | 23699 |