Genomic map of Mycobacterium phage Spartacus (JQ300538)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
JQ300538
Definition
Mycobacterium phage Spartacus, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Cheoctovirus; Mycobacterium virus Spartacus.
DB of origin
PVOG
Length
61164
Host Name
Mycobacterium smegmatis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
110
%GC
61.65
Number of singletons
2
Number of paralogs
3

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
AFA45072.1 JQ300538_p64 hypothetical protein phrog_1834 unknown function unknown function 1 41404 41634
AFA45099.1 JQ300538_p91 hypothetical protein phrog_4152 unknown function unknown function 1 52843 52971
AFA45023.1 JQ300538_p15 minor tail subunit phrog_106 minor tail protein tail 1 13042 14751
AFA45033.1 JQ300538_p25 hypothetical protein phrog_754 minor tail protein tail 1 24348 25328
AFA45034.1 JQ300538_p26 HTH DNA binding domain protein phrog_686 HTH DNA binding protein DNA, RNA and nucleotide metabolism -1 25332 25463
AFA45061.1 JQ300538_p53 hypothetical protein phrog_1816 unknown function unknown function 1 37262 37453
AFA45111.1 JQ300538_p103 hypothetical protein phrog_1694 unknown function unknown function 1 56424 56582
AFA45067.1 JQ300538_p59 WhiB phrog_1333 unknown function unknown function 1 39633 40127
AFA45038.1 JQ300538_p30 hypothetical protein phrog_747 unknown function unknown function 1 26350 26571
AFA45105.1 JQ300538_p97 hypothetical protein phrog_2278 unknown function unknown function 1 54089 54307
AFA45027.1 JQ300538_p19 minor tail subunit phrog_346 minor tail protein tail 1 17481 20018
AFA45010.1 JQ300538_p2 terminase large subunit phrog_9 terminase large subunit head and packaging 1 575 2212
AFA45078.1 JQ300538_p70 helicase domain protein phrog_16 DNA helicase DNA, RNA and nucleotide metabolism 1 43606 46155
AFA45087.1 JQ300538_p79 hypothetical protein phrog_4296 unknown function unknown function 1 49494 49856
AFA45080.1 JQ300538_p72 hypothetical protein phrog_2704 unknown function unknown function 1 46369 46518
AFA45053.1 JQ300538_p45 repressor phrog_3949 transcriptional repressor transcription regulation -1 33935 34426
AFA45077.1 JQ300538_p69 hypothetical protein singleton unknown function unknown function 1 43502 43609
AFA45075.1 JQ300538_p67 HNH endonuclease phrog_740 HNH endonuclease DNA, RNA and nucleotide metabolism 1 42463 42825
AFA45113.1 JQ300538_p105 hypothetical protein phrog_1186 unknown function unknown function 1 56830 57231
AFA45076.1 JQ300538_p68 hypothetical protein phrog_2233 unknown function unknown function 1 42822 43505
AFA45042.1 JQ300538_p34 holin phrog_443 holin lysis 1 29042 29275
AFA45106.1 JQ300538_p98 hypothetical protein phrog_6816 unknown function unknown function 1 54307 54549
AFA45068.1 JQ300538_p60 hypothetical protein phrog_2096 unknown function unknown function 1 40124 40609
AFA45089.1 JQ300538_p81 hypothetical protein phrog_14414 unknown function unknown function 1 50153 50353
AFA45036.1 JQ300538_p28 hypothetical protein phrog_932 unknown function unknown function 1 25965 26111
AFA45114.1 JQ300538_p106 hypothetical protein phrog_1385 unknown function unknown function 1 57228 57470
AFA45021.1 JQ300538_p13 tail assembly chaperone phrog_621 tail assembly chaperone tail 1 8563 9114
AFA45062.1 JQ300538_p54 hypothetical protein phrog_3381 unknown function unknown function 1 37450 37626
AFA45108.1 JQ300538_p100 hypothetical protein phrog_908 unknown function unknown function 1 54815 55489
AFA45094.1 JQ300538_p86 hypothetical protein phrog_14505 unknown function unknown function 1 51353 51568
AFA45104.1 JQ300538_p96 hypothetical protein phrog_6676 unknown function unknown function 1 53635 54033
AFA45056.1 JQ300538_p48 hypothetical protein phrog_14857 HTH DNA binding protein DNA, RNA and nucleotide metabolism 1 35829 36197
AFA45109.1 JQ300538_p101 hypothetical protein phrog_8604 unknown function unknown function 1 55500 56126
AFA45115.1 JQ300538_p107 hypothetical protein phrog_2057 unknown function unknown function 1 57463 57624
AFA45118.1 JQ300538_p110 N-acetylglucosaminotransferase phrog_854 glucosyltransferase moron, auxiliary metabolic gene and host takeover 1 59296 59919
AFA45044.1 JQ300538_p36 hypothetical protein phrog_2004 unknown function unknown function 1 29671 29904
AFA45091.1 JQ300538_p83 HTH binding domain protein phrog_2939 unknown function unknown function 1 50534 50815
AFA45065.1 JQ300538_p57 hypothetical protein phrog_1849 unknown function unknown function 1 39008 39289
AFA45090.1 JQ300538_p82 hypothetical protein phrog_1943 unknown function unknown function 1 50350 50550
AFA45088.1 JQ300538_p80 hypothetical protein phrog_2080 unknown function unknown function 1 49849 50073
AFA45054.1 JQ300538_p46 HTH DNA binding domain protein phrog_3642 HTH DNA binding protein DNA, RNA and nucleotide metabolism 1 34659 34904
AFA45013.1 JQ300538_p5 scaffolding protein phrog_2592 head scaffolding protein head and packaging 1 4381 5031
AFA45015.1 JQ300538_p7 hypothetical protein phrog_2377 head-tail adaptor Ad1 connector 1 5871 6437
AFA45050.1 JQ300538_p42 toxin/antitoxin phrog_1213 RelE-like toxin moron, auxiliary metabolic gene and host takeover 1 32647 32958
AFA45039.1 JQ300538_p31 hypothetical protein phrog_5492 unknown function unknown function 1 26568 26741
AFA45085.1 JQ300538_p77 hypothetical protein phrog_5500 unknown function unknown function 1 48377 48595
AFA45045.1 JQ300538_p37 DnaQ-like protein phrog_403 DNA polymerase exonuclease subunit DNA, RNA and nucleotide metabolism 1 29891 30712
AFA45095.1 JQ300538_p87 hypothetical protein phrog_647 unknown function unknown function 1 51565 51846
AFA45086.1 JQ300538_p78 hypothetical protein phrog_2149 replication initiation protein DNA, RNA and nucleotide metabolism 1 48592 49497
AFA45096.1 JQ300538_p88 hypothetical protein phrog_2021 unknown function unknown function 1 51839 52264
AFA45022.1 JQ300538_p14 tapemeasure protein phrog_1942 tail length tape measure protein tail 1 9517 13041
AFA45074.1 JQ300538_p66 hypothetical protein phrog_3290 single strand annealing protein DNA, RNA and nucleotide metabolism 1 41888 42466
AFA45028.1 JQ300538_p20 D-Ala-D-Ala carboxypeptidase phrog_382 minor tail protein with lysin activity tail 1 20015 21901
AFA45098.1 JQ300538_p90 hypothetical protein phrog_647 unknown function unknown function 1 52535 52846
AFA45049.1 JQ300538_p41 integrase phrog_1 integrase integration and excision 1 31407 32525
AFA45029.1 JQ300538_p21 hypothetical protein phrog_2106 minor tail protein tail 1 21904 23064
AFA45047.1 JQ300538_p39 hypothetical protein phrog_1791 unknown function unknown function 1 30803 31021
AFA45060.1 JQ300538_p52 DNA binding domain protein phrog_1840 excisionase integration and excision 1 37005 37265
AFA45011.1 JQ300538_p3 portal protein phrog_104 portal protein head and packaging 1 2243 3613
AFA45079.1 JQ300538_p71 hypothetical protein phrog_10510 unknown function unknown function 1 46163 46372
AFA45043.1 JQ300538_p35 hypothetical protein phrog_404 minor tail protein tail 1 29272 29646
AFA45082.1 JQ300538_p74 DNA methylase phrog_116 DNA methyltransferase other 1 46658 48085
AFA45012.1 JQ300538_p4 capsid maturation protease phrog_1522 head maturation protease head and packaging 1 3600 4355
AFA45030.1 JQ300538_p22 hypothetical protein phrog_240 head protein head and packaging 1 23082 23423
AFA45026.1 JQ300538_p18 hypothetical protein phrog_732 minor tail protein tail 1 16654 17484
AFA45100.1 JQ300538_p92 hypothetical protein phrog_1901 unknown function unknown function 1 52968 53159
AFA45093.1 JQ300538_p85 hypothetical protein phrog_1546 unknown function unknown function 1 51000 51356
AFA45016.1 JQ300538_p8 hypothetical protein phrog_763 head-tail adaptor connector 1 6434 6766
AFA45018.1 JQ300538_p10 hypothetical protein phrog_813 head-tail adaptor connector 1 7083 7490
AFA45117.1 JQ300538_p109 hypothetical protein phrog_1693 unknown function unknown function 1 59093 59299
AFA45112.1 JQ300538_p104 hypothetical protein phrog_3813 unknown function unknown function 1 56579 56833
AFA45081.1 JQ300538_p73 hypothetical protein phrog_2070 unknown function unknown function 1 46515 46664
AFA45055.1 JQ300538_p47 antirepressor phrog_130 anti-repressor Ant transcription regulation 1 34966 35832
AFA45046.1 JQ300538_p38 hypothetical protein phrog_8186 unknown function unknown function 1 30709 30813
AFA45014.1 JQ300538_p6 capsid protein phrog_267 major head protein head and packaging 1 5050 5871
AFA45071.1 JQ300538_p63 hypothetical protein phrog_2078 unknown function unknown function 1 41246 41404
AFA45040.1 JQ300538_p32 lysin A phrog_700 endolysin lysis 1 26738 28030
AFA45083.1 JQ300538_p75 hypothetical protein phrog_1311 unknown function unknown function 1 48082 48258
AFA45048.1 JQ300538_p40 hypothetical protein phrog_1839 unknown function unknown function 1 31014 31106
AFA45020.1 JQ300538_p12 tail assembly chaperone phrog_978 tail assembly chaperone tail 1 8563 9499
AFA45024.1 JQ300538_p16 minor tail subunit phrog_20512 minor tail protein tail 1 14836 16068
AFA45092.1 JQ300538_p84 hypothetical protein phrog_1901 unknown function unknown function 1 50812 51003
AFA45059.1 JQ300538_p51 hypothetical protein phrog_2025 unknown function unknown function 1 36704 36916
AFA45073.1 JQ300538_p65 hypothetical protein phrog_2632 unknown function unknown function 1 41631 41891
AFA45103.1 JQ300538_p95 hypothetical protein phrog_1545 unknown function unknown function 1 53498 53638
AFA45057.1 JQ300538_p49 hypothetical protein singleton unknown function unknown function 1 36331 36411
AFA45107.1 JQ300538_p99 hypothetical protein phrog_2247 unknown function unknown function 1 54546 54818
AFA45035.1 JQ300538_p27 hypothetical protein phrog_411 unknown function unknown function 1 25674 25958
AFA45009.1 JQ300538_p1 terminase small subunit phrog_226 minor tail protein tail 1 112 567
AFA45101.1 JQ300538_p93 hypothetical protein phrog_10718 unknown function unknown function 1 53156 53317
AFA45063.1 JQ300538_p55 hypothetical protein phrog_1797 unknown function unknown function 1 37623 38033
AFA45052.1 JQ300538_p44 hypothetical protein phrog_1948 unknown function unknown function -1 33214 33702
AFA45051.1 JQ300538_p43 toxin/antitoxin phrog_2268 antitoxin from a toxin-antitoxin system moron, auxiliary metabolic gene and host takeover 1 32955 33203
AFA45019.1 JQ300538_p11 major tail subunit phrog_476 major tail protein tail 1 7617 8426
AFA45102.1 JQ300538_p94 hypothetical protein phrog_1091 unknown function unknown function 1 53310 53501
AFA45041.1 JQ300538_p33 lysin B phrog_102 endolysin lysis 1 28027 29028
AFA45070.1 JQ300538_p62 HTH DNA binding domain protein phrog_664 DNA binding protein DNA, RNA and nucleotide metabolism 1 40884 41249
AFA45058.1 JQ300538_p50 hypothetical protein phrog_5253 unknown function unknown function 1 36408 36707
AFA45064.1 JQ300538_p56 hypothetical protein phrog_3416 unknown function unknown function 1 38115 38927
AFA45017.1 JQ300538_p9 hypothetical protein phrog_1929 head-tail connector protein connector 1 6767 7093
AFA45116.1 JQ300538_p108 polypeptide N-acetylgalactosaminyltransferase phrog_1579 glycosyltransferase moron, auxiliary metabolic gene and host takeover 1 57651 59090
AFA45066.1 JQ300538_p58 hypothetical protein phrog_658 unknown function unknown function 1 39286 39633
AFA45084.1 JQ300538_p76 hypothetical protein phrog_6193 unknown function unknown function 1 48255 48380
AFA45097.1 JQ300538_p89 hypothetical protein phrog_647 unknown function unknown function 1 52261 52542
AFA45110.1 JQ300538_p102 hypothetical protein phrog_1869 unknown function unknown function 1 56254 56418
AFA45025.1 JQ300538_p17 hypothetical protein phrog_18875 minor tail protein tail 1 16068 16598
AFA45069.1 JQ300538_p61 WhiB phrog_472 WhiB transcriptional factor transcription regulation 1 40606 40887
AFA45037.1 JQ300538_p29 hypothetical protein phrog_1172 unknown function unknown function 1 26108 26275
AFA45032.1 JQ300538_p24 hypothetical protein phrog_2012 minor tail protein tail 1 23713 24351
AFA45031.1 JQ300538_p23 hypothetical protein phrog_2005 minor tail protein tail 1 23442 23699