Genomic map of Lactococcus phage ASCC284 (JQ740790)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
JQ740790
Definition
Lactococcus Phage ASCC284, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Skunavirus; unclassified Skunavirus.
DB of origin
PVOG
Length
33178
Host Name
Lactococcus lactis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
57
%GC
34.65
Number of singletons
0
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
AFE86960.1 JQ740790_p52 hypothetical protein phrog_5487 unknown function unknown function -1 29731 29895
AFE86930.1 JQ740790_p22 bifunctional anti-holin / holin phrog_1379 unknown function unknown function 1 17912 18265
AFE86944.1 JQ740790_p36 hypothetical protein phrog_1083 unknown function unknown function -1 22626 22949
AFE86909.1 JQ740790_p1 terminase small subunit phrog_1437 terminase small subunit head and packaging 1 241 765
AFE86943.1 JQ740790_p35 hypothetical protein phrog_3002 unknown function unknown function -1 22421 22615
AFE86939.1 JQ740790_p31 hypothetical protein phrog_3365 unknown function unknown function -1 21295 21483
AFE86947.1 JQ740790_p39 hypothetical protein phrog_1919 unknown function unknown function -1 23928 24245
AFE86934.1 JQ740790_p26 hypothetical protein phrog_10611 unknown function unknown function -1 19965 20114
AFE86917.1 JQ740790_p9 structural protein phrog_1428 head-tail connector protein connector 1 5913 6176
AFE86950.1 JQ740790_p42 early protein phrog_1278 single strand DNA binding protein DNA, RNA and nucleotide metabolism -1 25066 25425
AFE86936.1 JQ740790_p28 hypothetical protein phrog_1441 unknown function unknown function -1 20635 20808
AFE86920.1 JQ740790_p12 structural protein phrog_1440 virion structural protein head and packaging 1 6819 7184
AFE86935.1 JQ740790_p27 hypothetical protein phrog_1415 unknown function unknown function -1 20288 20635
AFE86913.1 JQ740790_p5 HNH endonuclease phrog_119 HNH endonuclease DNA, RNA and nucleotide metabolism 1 2768 3052
AFE86925.1 JQ740790_p17 tape measure protein phrog_58 tail length tape measure protein tail 1 11793 14783
AFE86911.1 JQ740790_p3 hypothetical protein phrog_9973 unknown function unknown function 1 1005 1154
AFE86919.1 JQ740790_p11 structural protein phrog_1484 virion structural protein head and packaging 1 6487 6828
AFE86951.1 JQ740790_p43 sak protein phrog_659 Sak-like ssDNA annealing protein DNA, RNA and nucleotide metabolism -1 25429 25983
AFE86926.1 JQ740790_p18 hypothetical protein phrog_1424 tail protein tail 1 14783 15679
AFE86938.1 JQ740790_p30 early protein phrog_1509 unknown function unknown function -1 20977 21231
AFE86921.1 JQ740790_p13 neck passage structure protein phrog_16313 virion structural protein head and packaging 1 7241 9907
AFE86931.1 JQ740790_p23 lysin phrog_670 endolysin lysis 1 18262 18942
AFE86940.1 JQ740790_p32 hypothetical protein phrog_3530 unknown function unknown function -1 21560 22000
AFE86937.1 JQ740790_p29 hypothetical protein phrog_1820 unknown function unknown function -1 20808 20984
AFE86955.1 JQ740790_p47 hypothetical protein phrog_2228 unknown function unknown function -1 27270 27647
AFE86918.1 JQ740790_p10 structural protein phrog_1429 virion structural protein head and packaging 1 6176 6490
AFE86915.1 JQ740790_p7 protease phrog_80 head maturation protease head and packaging 1 4182 4718
AFE86922.1 JQ740790_p14 major capsid protein phrog_1433 major tail protein tail 1 10026 10931
AFE86916.1 JQ740790_p8 structural protein phrog_1393 minor head protein head and packaging 1 4711 5892
AFE86949.1 JQ740790_p41 hypothetical protein phrog_1295 unknown function unknown function -1 24835 25050
AFE86933.1 JQ740790_p25 hypothetical protein phrog_1430 unknown function unknown function -1 19695 19964
AFE86952.1 JQ740790_p44 HNH endonuclease phrog_59 HNH endonuclease DNA, RNA and nucleotide metabolism -1 25980 26771
AFE86945.1 JQ740790_p37 hypothetical protein phrog_1825 DNA methyltransferase other -1 22998 23432
AFE86958.1 JQ740790_p50 hypothetical protein phrog_2541 unknown function unknown function -1 29051 29272
AFE86964.1 JQ740790_p56 hypothetical protein phrog_1436 unknown function unknown function 1 31405 31536
AFE86953.1 JQ740790_p45 hypothetical protein phrog_1449 unknown function unknown function -1 26758 27024
AFE86965.1 JQ740790_p57 Holliday junction endonuclease phrog_827 Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 31533 32015
AFE86954.1 JQ740790_p46 hypothetical protein phrog_1632 unknown function unknown function -1 26978 27268
AFE86957.1 JQ740790_p49 DNA polymerase subunit phrog_1284 unknown function unknown function -1 28108 29058
AFE86948.1 JQ740790_p40 hypothetical protein phrog_1317 unknown function unknown function -1 24332 24838
AFE86962.1 JQ740790_p54 hypothetical protein phrog_1656 unknown function unknown function -1 30953 31141
AFE86928.1 JQ740790_p20 hypothetical protein phrog_1434 unknown function unknown function 1 16796 17089
AFE86912.1 JQ740790_p4 terminase large subunit phrog_9 terminase large subunit head and packaging 1 1156 2778
AFE86923.1 JQ740790_p15 structural protein phrog_1420 virion structural protein head and packaging 1 10986 11261
AFE86956.1 JQ740790_p48 hypothetical protein phrog_1405 unknown function unknown function -1 27704 27961
AFE86910.1 JQ740790_p2 hypothetical protein phrog_4501 unknown function unknown function 1 762 992
AFE86961.1 JQ740790_p53 hypothetical protein phrog_2413 unknown function unknown function -1 30415 30534
AFE86942.1 JQ740790_p34 hypothetical protein phrog_1508 unknown function unknown function -1 22305 22424
AFE86941.1 JQ740790_p33 early protein phrog_1225 unknown function unknown function -1 21997 22305
AFE86959.1 JQ740790_p51 hypothetical protein phrog_12718 unknown function unknown function -1 29341 29520
AFE86963.1 JQ740790_p55 hypothetical protein phrog_1952 unknown function unknown function 1 31272 31400
AFE86914.1 JQ740790_p6 portal protein phrog_12 portal protein head and packaging 1 3065 4201
AFE86932.1 JQ740790_p24 hypothetical protein phrog_3874 transglycosylase other -1 19071 19634
AFE86946.1 JQ740790_p38 hypothetical protein phrog_4000 unknown function unknown function -1 23422 23682
AFE86927.1 JQ740790_p19 hypothetical protein phrog_1432 tail associated lysin tail 1 15679 16806
AFE86924.1 JQ740790_p16 structural protein phrog_1421 virion structural protein head and packaging 1 11281 11793
AFE86929.1 JQ740790_p21 receptor binding protein phrog_1630 receptor binding tail protein tail 1 17079 17897