Genomic map of Lactococcus phage ASCC310 (JQ740792)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
JQ740792
Definition
Lactococcus Phage ASCC310, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Skunavirus; unclassified Skunavirus.
DB of origin
PVOG
Length
32546
Host Name
Lactococcus lactis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
55
%GC
34.75
Number of singletons
0
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
AFE87038.1 JQ740792_p15 structural protein phrog_1420 virion structural protein head and packaging 1 10986 11261
AFE87045.1 JQ740792_p22 bifunctional anti-holin / holin phrog_1379 unknown function unknown function 1 17912 18265
AFE87059.1 JQ740792_p36 hypothetical protein phrog_1083 unknown function unknown function -1 22626 22949
AFE87046.1 JQ740792_p23 lysin phrog_670 endolysin lysis 1 18262 18942
AFE87070.1 JQ740792_p47 hypothetical protein phrog_2228 unknown function unknown function -1 27271 27648
AFE87063.1 JQ740792_p40 hypothetical protein phrog_1317 unknown function unknown function -1 24333 24839
AFE87033.1 JQ740792_p10 structural protein phrog_1429 virion structural protein head and packaging 1 6176 6490
AFE87052.1 JQ740792_p29 hypothetical protein phrog_1820 unknown function unknown function -1 20808 20984
AFE87068.1 JQ740792_p45 hypothetical protein phrog_1449 unknown function unknown function -1 26759 27025
AFE87061.1 JQ740792_p38 hypothetical protein phrog_4000 unknown function unknown function -1 23422 23682
AFE87048.1 JQ740792_p25 hypothetical protein phrog_1430 unknown function unknown function -1 19695 19964
AFE87026.1 JQ740792_p3 hypothetical protein phrog_9973 unknown function unknown function 1 1005 1154
AFE87075.1 JQ740792_p52 hypothetical protein phrog_1656 unknown function unknown function -1 30321 30509
AFE87044.1 JQ740792_p21 receptor binding protein phrog_1630 receptor binding tail protein tail 1 17079 17897
AFE87072.1 JQ740792_p49 DNA polymerase subunit phrog_1284 unknown function unknown function -1 28109 29059
AFE87050.1 JQ740792_p27 hypothetical protein phrog_1415 unknown function unknown function -1 20288 20635
AFE87034.1 JQ740792_p11 structural protein phrog_1484 virion structural protein head and packaging 1 6487 6828
AFE87073.1 JQ740792_p50 hypothetical protein phrog_2541 unknown function unknown function -1 29052 29273
AFE87056.1 JQ740792_p33 early protein phrog_1225 unknown function unknown function -1 21997 22305
AFE87067.1 JQ740792_p44 HNH endonuclease phrog_59 HNH endonuclease DNA, RNA and nucleotide metabolism -1 25981 26772
AFE87030.1 JQ740792_p7 protease phrog_80 head maturation protease head and packaging 1 4182 4718
AFE87042.1 JQ740792_p19 hypothetical protein phrog_1432 tail associated lysin tail 1 15679 16806
AFE87054.1 JQ740792_p31 hypothetical protein phrog_3365 unknown function unknown function -1 21295 21483
AFE87031.1 JQ740792_p8 structural protein phrog_1393 minor head protein head and packaging 1 4711 5892
AFE87051.1 JQ740792_p28 hypothetical protein phrog_1441 unknown function unknown function -1 20635 20808
AFE87060.1 JQ740792_p37 hypothetical protein phrog_1825 DNA methyltransferase other -1 22998 23432
AFE87035.1 JQ740792_p12 structural protein phrog_1440 virion structural protein head and packaging 1 6819 7184
AFE87039.1 JQ740792_p16 structural protein phrog_1421 virion structural protein head and packaging 1 11281 11793
AFE87025.1 JQ740792_p2 hypothetical protein phrog_4501 unknown function unknown function 1 762 992
AFE87066.1 JQ740792_p43 sak protein phrog_659 Sak-like ssDNA annealing protein DNA, RNA and nucleotide metabolism -1 25430 25984
AFE87071.1 JQ740792_p48 hypothetical protein phrog_1405 unknown function unknown function -1 27705 27962
AFE87043.1 JQ740792_p20 hypothetical protein phrog_1434 unknown function unknown function 1 16796 17089
AFE87036.1 JQ740792_p13 neck passage structure protein phrog_16313 virion structural protein head and packaging 1 7241 9907
AFE87064.1 JQ740792_p41 hypothetical protein phrog_1295 unknown function unknown function -1 24836 25051
AFE87029.1 JQ740792_p6 portal protein phrog_12 portal protein head and packaging 1 3065 4201
AFE87078.1 JQ740792_p55 Holliday junction endonuclease phrog_827 Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 30901 31383
AFE87024.1 JQ740792_p1 terminase small subunit phrog_1437 terminase small subunit head and packaging 1 241 765
AFE87040.1 JQ740792_p17 tape measure protein phrog_58 tail length tape measure protein tail 1 11793 14783
AFE87055.1 JQ740792_p32 hypothetical protein phrog_3530 unknown function unknown function -1 21560 22000
AFE87076.1 JQ740792_p53 hypothetical protein phrog_1952 unknown function unknown function 1 30640 30768
AFE87074.1 JQ740792_p51 hypothetical protein phrog_2413 unknown function unknown function -1 29794 29913
AFE87041.1 JQ740792_p18 hypothetical protein phrog_1424 tail protein tail 1 14783 15679
AFE87062.1 JQ740792_p39 hypothetical protein phrog_1919 unknown function unknown function -1 23929 24246
AFE87077.1 JQ740792_p54 hypothetical protein phrog_1436 unknown function unknown function 1 30773 30904
AFE87028.1 JQ740792_p5 HNH endonuclease phrog_119 HNH endonuclease DNA, RNA and nucleotide metabolism 1 2768 3052
AFE87047.1 JQ740792_p24 hypothetical protein phrog_3874 transglycosylase other -1 19071 19634
AFE87053.1 JQ740792_p30 early protein phrog_1509 unknown function unknown function -1 20977 21231
AFE87065.1 JQ740792_p42 early protein phrog_1278 single strand DNA binding protein DNA, RNA and nucleotide metabolism -1 25067 25426
AFE87057.1 JQ740792_p34 hypothetical protein phrog_1508 unknown function unknown function -1 22305 22424
AFE87069.1 JQ740792_p46 hypothetical protein phrog_1632 unknown function unknown function -1 26979 27269
AFE87049.1 JQ740792_p26 hypothetical protein phrog_10611 unknown function unknown function -1 19965 20114
AFE87032.1 JQ740792_p9 structural protein phrog_1428 head-tail connector protein connector 1 5913 6176
AFE87027.1 JQ740792_p4 terminase large subunit phrog_9 terminase large subunit head and packaging 1 1156 2778
AFE87037.1 JQ740792_p14 major capsid protein phrog_1433 major tail protein tail 1 10026 10931
AFE87058.1 JQ740792_p35 hypothetical protein phrog_3002 unknown function unknown function -1 22421 22615