Genomic map of Lactococcus phage ASCC324 (JQ740793)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
JQ740793
Definition
Lactococcus Phage ASCC324, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Skunavirus; unclassified Skunavirus.
DB of origin
PVOG
Length
32277
Host Name
Lactococcus lactis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
58
%GC
34.51
Number of singletons
0
Number of paralogs
1

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
AFE87090.1 JQ740793_p12 neck passage structure protein phrog_7918 neck passage structure protein connector 1 7079 9250
AFE87079.1 JQ740793_p1 terminase small subunit phrog_1437 terminase small subunit head and packaging 1 241 765
AFE87111.1 JQ740793_p33 early protein phrog_1225 unknown function unknown function -1 20976 21284
AFE87126.1 JQ740793_p48 hypothetical protein phrog_2228 unknown function unknown function -1 26585 26920
AFE87094.1 JQ740793_p16 structural protein phrog_1421 virion structural protein head and packaging 1 10684 11196
AFE87096.1 JQ740793_p18 hypothetical protein phrog_1424 tail protein tail 1 13880 14776
AFE87121.1 JQ740793_p43 early protein phrog_1278 single strand DNA binding protein DNA, RNA and nucleotide metabolism -1 24664 25023
AFE87135.1 JQ740793_p57 hypothetical protein phrog_1436 unknown function unknown function 1 30563 30694
AFE87087.1 JQ740793_p9 structural protein phrog_1429 virion structural protein head and packaging 1 6024 6338
AFE87131.1 JQ740793_p53 hypothetical protein phrog_4505 unknown function unknown function -1 28683 28883
AFE87091.1 JQ740793_p13 structural protein phrog_15944 virion structural protein head and packaging 1 9287 9424
AFE87101.1 JQ740793_p23 lysin phrog_670 endolysin lysis 1 17342 18046
AFE87092.1 JQ740793_p14 major capsid protein phrog_1433 major tail protein tail 1 9445 10350
AFE87084.1 JQ740793_p6 protease phrog_80 head maturation protease head and packaging 1 4030 4566
AFE87116.1 JQ740793_p38 hypothetical protein phrog_1825 DNA methyltransferase other -1 22869 23117
AFE87093.1 JQ740793_p15 structural protein phrog_1420 virion structural protein head and packaging 1 10389 10664
AFE87099.1 JQ740793_p21 receptor binding protein phrog_1630 receptor binding tail protein tail 1 16176 16970
AFE87118.1 JQ740793_p40 hypothetical protein phrog_1317 unknown function unknown function -1 23566 24099
AFE87124.1 JQ740793_p46 hypothetical protein phrog_1449 unknown function unknown function -1 26078 26344
AFE87097.1 JQ740793_p19 hypothetical protein phrog_1432 tail associated lysin tail 1 14776 15903
AFE87132.1 JQ740793_p54 HNH endonuclease phrog_59 HNH endonuclease DNA, RNA and nucleotide metabolism -1 29691 30110
AFE87113.1 JQ740793_p35 hypothetical protein phrog_17643 unknown function unknown function -1 21440 21553
AFE87106.1 JQ740793_p28 hypothetical protein phrog_1820 unknown function unknown function -1 19708 19884
AFE87088.1 JQ740793_p10 structural protein phrog_1484 virion structural protein head and packaging 1 6328 6663
AFE87081.1 JQ740793_p3 terminase large subunit phrog_9 terminase large subunit head and packaging 1 1004 2626
AFE87128.1 JQ740793_p50 DNA polymerase subunit phrog_1284 unknown function unknown function -1 27269 28219
AFE87080.1 JQ740793_p2 hypothetical protein phrog_4501 unknown function unknown function 1 762 992
AFE87134.1 JQ740793_p56 hypothetical protein phrog_1952 unknown function unknown function 1 30430 30570
AFE87098.1 JQ740793_p20 hypothetical protein phrog_1434 unknown function unknown function 1 15893 16186
AFE87086.1 JQ740793_p8 structural protein phrog_1428 head-tail connector protein connector 1 5761 6024
AFE87112.1 JQ740793_p34 hypothetical protein phrog_1508 unknown function unknown function -1 21284 21403
AFE87129.1 JQ740793_p51 hypothetical protein phrog_2541 unknown function unknown function -1 28212 28433
AFE87105.1 JQ740793_p27 hypothetical protein phrog_1441 unknown function unknown function -1 19541 19708
AFE87107.1 JQ740793_p29 hypothetical protein phrog_2530 unknown function unknown function -1 19886 20077
AFE87114.1 JQ740793_p36 hypothetical protein phrog_3972 unknown function unknown function -1 21550 21900
AFE87095.1 JQ740793_p17 tape measure protein phrog_58 tail length tape measure protein tail 1 11196 13880
AFE87109.1 JQ740793_p31 hypothetical protein phrog_3365 unknown function unknown function -1 20439 20627
AFE87123.1 JQ740793_p45 HNH endonuclease phrog_59 HNH endonuclease DNA, RNA and nucleotide metabolism -1 25591 26091
AFE87103.1 JQ740793_p25 hypothetical protein phrog_1430 unknown function unknown function -1 18752 19021
AFE87136.1 JQ740793_p58 Holliday junction endonuclease phrog_827 Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 30691 31173
AFE87125.1 JQ740793_p47 hypothetical protein phrog_1632 unknown function unknown function -1 26301 26588
AFE87119.1 JQ740793_p41 hypothetical protein phrog_13331 unknown function unknown function -1 24119 24439
AFE87089.1 JQ740793_p11 structural protein phrog_1440 virion structural protein head and packaging 1 6657 7022
AFE87130.1 JQ740793_p52 hypothetical protein phrog_12718 unknown function unknown function -1 28503 28682
AFE87110.1 JQ740793_p32 hypothetical protein phrog_6037 unknown function unknown function -1 20702 20917
AFE87085.1 JQ740793_p7 structural protein phrog_1393 minor head protein head and packaging 1 4559 5740
AFE87133.1 JQ740793_p55 hypothetical protein phrog_1656 unknown function unknown function -1 30111 30299
AFE87122.1 JQ740793_p44 sak protein phrog_659 Sak-like ssDNA annealing protein DNA, RNA and nucleotide metabolism -1 25028 25594
AFE87083.1 JQ740793_p5 portal protein phrog_12 portal protein head and packaging 1 2913 4049
AFE87127.1 JQ740793_p49 hypothetical protein phrog_1405 unknown function unknown function -1 27013 27276
AFE87108.1 JQ740793_p30 early protein phrog_1509 unknown function unknown function -1 20119 20370
AFE87117.1 JQ740793_p39 hypothetical protein phrog_9706 unknown function unknown function -1 23340 23525
AFE87104.1 JQ740793_p26 hypothetical protein phrog_1415 unknown function unknown function -1 19194 19541
AFE87100.1 JQ740793_p22 bifunctional anti-holin / holin phrog_1379 unknown function unknown function 1 16992 17345
AFE87120.1 JQ740793_p42 hypothetical protein phrog_1295 unknown function unknown function -1 24436 24651
AFE87115.1 JQ740793_p37 hypothetical protein phrog_56 DNA methyltransferase other -1 21962 22876
AFE87082.1 JQ740793_p4 HNH endonuclease phrog_119 HNH endonuclease DNA, RNA and nucleotide metabolism 1 2616 2900
AFE87102.1 JQ740793_p24 hypothetical protein phrog_17309 unknown function unknown function -1 18143 18364