Genomic map of Lactococcus phage ASCC497 (JQ740808)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
JQ740808
Definition
Lactococcus Phage ASCC497, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Skunavirus; unclassified Skunavirus.
DB of origin
PVOG
Length
31774
Host Name
Lactococcus lactis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
56
%GC
34.63
Number of singletons
1
Number of paralogs
1

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
AFE87805.1 JQ740808_p33 hypothetical protein phrog_3530 unknown function unknown function -1 21540 21980
AFE87813.1 JQ740808_p41 hypothetical protein phrog_1317 unknown function unknown function -1 24089 24595
AFE87821.1 JQ740808_p49 hypothetical protein phrog_1405 unknown function unknown function -1 27158 27421
AFE87812.1 JQ740808_p40 hypothetical protein phrog_1919 unknown function unknown function -1 23685 24002
AFE87790.1 JQ740808_p18 hypothetical protein phrog_1424 tail protein tail 1 14805 15701
AFE87824.1 JQ740808_p52 HNH endonuclease phrog_59 HNH endonuclease DNA, RNA and nucleotide metabolism -1 29429 29845
AFE87803.1 JQ740808_p31 hypothetical protein phrog_2530 unknown function unknown function -1 20975 21166
AFE87807.1 JQ740808_p35 hypothetical protein phrog_1508 unknown function unknown function -1 22285 22404
AFE87777.1 JQ740808_p5 HNH endonuclease phrog_119 HNH endonuclease DNA, RNA and nucleotide metabolism 1 2790 3074
AFE87825.1 JQ740808_p53 hypothetical protein phrog_1656 unknown function unknown function -1 29842 30030
AFE87817.1 JQ740808_p45 HNH endonuclease phrog_59 HNH endonuclease DNA, RNA and nucleotide metabolism -1 25737 26237
AFE87796.1 JQ740808_p24 hypothetical protein phrog_17309 unknown function unknown function -1 19104 19244
AFE87775.1 JQ740808_p3 hypothetical protein phrog_9973 unknown function unknown function 1 1027 1176
AFE87786.1 JQ740808_p14 major capsid protein phrog_1433 major tail protein tail 1 10048 10953
AFE87800.1 JQ740808_p28 hypothetical protein phrog_1415 unknown function unknown function -1 20283 20630
AFE87795.1 JQ740808_p23 lysin phrog_670 endolysin lysis 1 18284 18964
AFE87788.1 JQ740808_p16 structural protein phrog_1421 virion structural protein head and packaging 1 11303 11815
AFE87797.1 JQ740808_p25 hypothetical protein singleton unknown function unknown function -1 19340 19513
AFE87798.1 JQ740808_p26 hypothetical protein phrog_1430 unknown function unknown function -1 19704 19973
AFE87778.1 JQ740808_p6 portal protein phrog_12 portal protein head and packaging 1 3087 4223
AFE87802.1 JQ740808_p30 hypothetical protein phrog_1820 unknown function unknown function -1 20797 20973
AFE87789.1 JQ740808_p17 tape measure protein phrog_58 tail length tape measure protein tail 1 11815 14805
AFE87799.1 JQ740808_p27 hypothetical protein phrog_10611 unknown function unknown function -1 19974 20123
AFE87809.1 JQ740808_p37 hypothetical protein phrog_20711 unknown function unknown function -1 22606 22854
AFE87806.1 JQ740808_p34 early protein phrog_1225 unknown function unknown function -1 21977 22285
AFE87787.1 JQ740808_p15 structural protein phrog_1420 virion structural protein head and packaging 1 11008 11283
AFE87776.1 JQ740808_p4 terminase large subunit phrog_9 terminase large subunit head and packaging 1 1178 2800
AFE87785.1 JQ740808_p13 neck passage structure protein phrog_16313 virion structural protein head and packaging 1 7263 9929
AFE87781.1 JQ740808_p9 structural protein phrog_1428 head-tail connector protein connector 1 5935 6198
AFE87801.1 JQ740808_p29 hypothetical protein phrog_1441 unknown function unknown function -1 20630 20797
AFE87819.1 JQ740808_p47 hypothetical protein phrog_1632 unknown function unknown function -1 26447 26734
AFE87791.1 JQ740808_p19 hypothetical protein phrog_1432 tail associated lysin tail 1 15701 16828
AFE87774.1 JQ740808_p2 hypothetical protein phrog_4501 unknown function unknown function 1 784 1014
AFE87808.1 JQ740808_p36 hypothetical protein phrog_3002 unknown function unknown function -1 22401 22595
AFE87810.1 JQ740808_p38 hypothetical protein phrog_1825 DNA methyltransferase other -1 22893 23192
AFE87828.1 JQ740808_p56 Holliday junction endonuclease phrog_827 Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 30421 30903
AFE87792.1 JQ740808_p20 hypothetical protein phrog_1434 unknown function unknown function 1 16818 17111
AFE87811.1 JQ740808_p39 hypothetical protein phrog_4000 unknown function unknown function -1 23179 23439
AFE87782.1 JQ740808_p10 structural protein phrog_1429 virion structural protein head and packaging 1 6198 6512
AFE87814.1 JQ740808_p42 hypothetical protein phrog_1295 unknown function unknown function -1 24592 24807
AFE87816.1 JQ740808_p44 sak protein phrog_659 Sak-like ssDNA annealing protein DNA, RNA and nucleotide metabolism -1 25186 25740
AFE87804.1 JQ740808_p32 early protein phrog_1509 unknown function unknown function -1 21208 21465
AFE87815.1 JQ740808_p43 early protein phrog_1278 single strand DNA binding protein DNA, RNA and nucleotide metabolism -1 24823 25182
AFE87784.1 JQ740808_p12 structural protein phrog_1440 virion structural protein head and packaging 1 6841 7206
AFE87827.1 JQ740808_p55 hypothetical protein phrog_1436 unknown function unknown function 1 30293 30424
AFE87779.1 JQ740808_p7 protease phrog_80 head maturation protease head and packaging 1 4204 4740
AFE87794.1 JQ740808_p22 bifunctional anti-holin / holin phrog_1379 unknown function unknown function 1 17934 18287
AFE87818.1 JQ740808_p46 hypothetical protein phrog_1449 unknown function unknown function -1 26239 26490
AFE87820.1 JQ740808_p48 hypothetical protein phrog_2228 unknown function unknown function -1 26736 27065
AFE87823.1 JQ740808_p51 hypothetical protein phrog_2541 unknown function unknown function -1 28357 28578
AFE87773.1 JQ740808_p1 terminase small subunit phrog_1437 terminase small subunit head and packaging 1 263 787
AFE87793.1 JQ740808_p21 receptor binding protein phrog_1630 receptor binding tail protein tail 1 17101 17919
AFE87826.1 JQ740808_p54 hypothetical protein phrog_5027 unknown function unknown function 1 30061 30288
AFE87780.1 JQ740808_p8 structural protein phrog_1393 minor head protein head and packaging 1 4733 5914
AFE87822.1 JQ740808_p50 DNA polymerase subunit phrog_1284 unknown function unknown function -1 27414 28364
AFE87783.1 JQ740808_p11 structural protein phrog_1484 virion structural protein head and packaging 1 6509 6850