Genomic map of Lactococcus phage ASCC506 (JQ740810)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
JQ740810
Definition
Lactococcus Phage ASCC506, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Skunavirus; unclassified Skunavirus.
DB of origin
PVOG
Length
32249
Host Name
Lactococcus lactis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
58
%GC
34.48
Number of singletons
0
Number of paralogs
1

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
AFE87918.1 JQ740810_p32 hypothetical protein phrog_6037 unknown function unknown function -1 20676 20891
AFE87905.1 JQ740810_p19 hypothetical protein phrog_1432 tail associated lysin tail 1 14786 15913
AFE87943.1 JQ740810_p57 hypothetical protein phrog_1436 unknown function unknown function 1 30535 30666
AFE87919.1 JQ740810_p33 early protein phrog_1225 unknown function unknown function -1 20950 21258
AFE87934.1 JQ740810_p48 hypothetical protein phrog_2228 unknown function unknown function -1 26558 26938
AFE87935.1 JQ740810_p49 hypothetical protein phrog_1405 unknown function unknown function -1 26985 27248
AFE87927.1 JQ740810_p41 hypothetical protein phrog_13331 unknown function unknown function -1 24092 24412
AFE87900.1 JQ740810_p14 major capsid protein phrog_1433 major tail protein tail 1 9455 10360
AFE87907.1 JQ740810_p21 receptor binding protein phrog_1630 receptor binding tail protein tail 1 16186 16944
AFE87942.1 JQ740810_p56 hypothetical protein phrog_1952 unknown function unknown function 1 30402 30542
AFE87887.1 JQ740810_p1 terminase small subunit phrog_1437 terminase small subunit head and packaging 1 251 775
AFE87922.1 JQ740810_p36 hypothetical protein phrog_3972 unknown function unknown function -1 21524 21874
AFE87916.1 JQ740810_p30 early protein phrog_1509 unknown function unknown function -1 20093 20350
AFE87925.1 JQ740810_p39 hypothetical protein phrog_9706 unknown function unknown function -1 23313 23498
AFE87941.1 JQ740810_p55 hypothetical protein phrog_1656 unknown function unknown function -1 30083 30271
AFE87908.1 JQ740810_p22 bifunctional anti-holin / holin phrog_1379 unknown function unknown function 1 16966 17319
AFE87890.1 JQ740810_p4 HNH endonuclease phrog_119 HNH endonuclease DNA, RNA and nucleotide metabolism 1 2626 2910
AFE87944.1 JQ740810_p58 Holliday junction endonuclease phrog_827 Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 30663 31145
AFE87898.1 JQ740810_p12 neck passage structure protein phrog_7918 neck passage structure protein connector 1 7089 9260
AFE87931.1 JQ740810_p45 HNH endonuclease phrog_59 HNH endonuclease DNA, RNA and nucleotide metabolism -1 25564 26064
AFE87936.1 JQ740810_p50 DNA polymerase subunit phrog_1284 unknown function unknown function -1 27241 28191
AFE87929.1 JQ740810_p43 early protein phrog_1278 single strand DNA binding protein DNA, RNA and nucleotide metabolism -1 24637 24996
AFE87917.1 JQ740810_p31 hypothetical protein phrog_3365 unknown function unknown function -1 20413 20601
AFE87897.1 JQ740810_p11 structural protein phrog_1440 virion structural protein head and packaging 1 6667 7032
AFE87940.1 JQ740810_p54 HNH endonuclease phrog_59 HNH endonuclease DNA, RNA and nucleotide metabolism -1 29663 30082
AFE87901.1 JQ740810_p15 structural protein phrog_1420 virion structural protein head and packaging 1 10399 10674
AFE87912.1 JQ740810_p26 hypothetical protein phrog_1415 unknown function unknown function -1 19168 19515
AFE87909.1 JQ740810_p23 lysin phrog_670 endolysin lysis 1 17316 18020
AFE87906.1 JQ740810_p20 hypothetical protein phrog_1434 unknown function unknown function 1 15903 16196
AFE87896.1 JQ740810_p10 structural protein phrog_1484 virion structural protein head and packaging 1 6338 6673
AFE87930.1 JQ740810_p44 sak protein phrog_659 Sak-like ssDNA annealing protein DNA, RNA and nucleotide metabolism -1 25001 25567
AFE87939.1 JQ740810_p53 hypothetical protein phrog_4505 unknown function unknown function -1 28655 28855
AFE87937.1 JQ740810_p51 hypothetical protein phrog_2541 unknown function unknown function -1 28184 28405
AFE87920.1 JQ740810_p34 hypothetical protein phrog_1508 unknown function unknown function -1 21258 21377
AFE87903.1 JQ740810_p17 tape measure protein phrog_58 tail length tape measure protein tail 1 11206 13890
AFE87938.1 JQ740810_p52 hypothetical protein phrog_12718 unknown function unknown function -1 28475 28654
AFE87904.1 JQ740810_p18 hypothetical protein phrog_1424 tail protein tail 1 13890 14786
AFE87914.1 JQ740810_p28 hypothetical protein phrog_1820 unknown function unknown function -1 19682 19858
AFE87893.1 JQ740810_p7 structural protein phrog_1393 minor head protein head and packaging 1 4569 5750
AFE87910.1 JQ740810_p24 hypothetical protein phrog_3874 transglycosylase other -1 18117 18665
AFE87891.1 JQ740810_p5 portal protein phrog_12 portal protein head and packaging 1 2923 4059
AFE87895.1 JQ740810_p9 structural protein phrog_1429 virion structural protein head and packaging 1 6034 6348
AFE87926.1 JQ740810_p40 hypothetical protein phrog_1317 unknown function unknown function -1 23539 24072
AFE87899.1 JQ740810_p13 structural protein phrog_15944 virion structural protein head and packaging 1 9297 9434
AFE87932.1 JQ740810_p46 hypothetical protein phrog_1449 unknown function unknown function -1 26051 26317
AFE87915.1 JQ740810_p29 hypothetical protein phrog_2530 unknown function unknown function -1 19860 20051
AFE87894.1 JQ740810_p8 structural protein phrog_1428 head-tail connector protein connector 1 5771 6034
AFE87928.1 JQ740810_p42 hypothetical protein phrog_1295 unknown function unknown function -1 24409 24624
AFE87902.1 JQ740810_p16 structural protein phrog_1421 virion structural protein head and packaging 1 10694 11206
AFE87933.1 JQ740810_p47 hypothetical protein phrog_1632 unknown function unknown function -1 26274 26561
AFE87911.1 JQ740810_p25 hypothetical protein phrog_1430 unknown function unknown function -1 18726 18995
AFE87888.1 JQ740810_p2 hypothetical protein phrog_4501 unknown function unknown function 1 772 1002
AFE87921.1 JQ740810_p35 hypothetical protein phrog_17643 unknown function unknown function -1 21414 21527
AFE87924.1 JQ740810_p38 hypothetical protein phrog_1825 DNA methyltransferase other -1 22843 23091
AFE87892.1 JQ740810_p6 protease phrog_80 head maturation protease head and packaging 1 4040 4576
AFE87913.1 JQ740810_p27 hypothetical protein phrog_1441 unknown function unknown function -1 19515 19682
AFE87923.1 JQ740810_p37 hypothetical protein phrog_56 DNA methyltransferase other -1 21936 22850
AFE87889.1 JQ740810_p3 terminase large subunit phrog_9 terminase large subunit head and packaging 1 1014 2636