Genomic map of Lactococcus phage ASCC527 (JQ740811)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
JQ740811
Definition
Lactococcus Phage ASCC527, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Skunavirus; unclassified Skunavirus.
DB of origin
PVOG
Length
32345
Host Name
Lactococcus lactis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
58
%GC
34.54
Number of singletons
0
Number of paralogs
1

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
AFE87961.1 JQ740811_p17 tape measure protein phrog_58 tail length tape measure protein tail 1 11265 13949
AFE87981.1 JQ740811_p37 hypothetical protein phrog_56 DNA methyltransferase other -1 22032 22946
AFE87993.1 JQ740811_p49 hypothetical protein phrog_1405 unknown function unknown function -1 27081 27344
AFE87992.1 JQ740811_p48 hypothetical protein phrog_2228 unknown function unknown function -1 26654 27034
AFE87982.1 JQ740811_p38 hypothetical protein phrog_1825 DNA methyltransferase other -1 22939 23187
AFE87975.1 JQ740811_p31 hypothetical protein phrog_3365 unknown function unknown function -1 20509 20697
AFE87989.1 JQ740811_p45 HNH endonuclease phrog_59 HNH endonuclease DNA, RNA and nucleotide metabolism -1 25660 26160
AFE87965.1 JQ740811_p21 receptor binding protein phrog_1630 receptor binding tail protein tail 1 16245 17039
AFE87957.1 JQ740811_p13 structural protein phrog_15944 virion structural protein head and packaging 1 9356 9493
AFE88002.1 JQ740811_p58 Holliday junction endonuclease phrog_827 Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 30759 31241
AFE87990.1 JQ740811_p46 hypothetical protein phrog_1449 unknown function unknown function -1 26147 26413
AFE87978.1 JQ740811_p34 hypothetical protein phrog_1508 unknown function unknown function -1 21354 21473
AFE88001.1 JQ740811_p57 hypothetical protein phrog_1436 unknown function unknown function 1 30631 30762
AFE87988.1 JQ740811_p44 sak protein phrog_659 Sak-like ssDNA annealing protein DNA, RNA and nucleotide metabolism -1 25097 25663
AFE87946.1 JQ740811_p2 hypothetical protein phrog_4501 unknown function unknown function 1 762 992
AFE87952.1 JQ740811_p8 structural protein phrog_1428 head-tail connector protein connector 1 5761 6024
AFE87963.1 JQ740811_p19 hypothetical protein phrog_1432 tail associated lysin tail 1 14845 15972
AFE87997.1 JQ740811_p53 hypothetical protein phrog_4505 unknown function unknown function -1 28751 28951
AFE87953.1 JQ740811_p9 structural protein phrog_1429 virion structural protein head and packaging 1 6024 6338
AFE87970.1 JQ740811_p26 hypothetical protein phrog_1415 unknown function unknown function -1 19264 19611
AFE87998.1 JQ740811_p54 HNH endonuclease phrog_59 HNH endonuclease DNA, RNA and nucleotide metabolism -1 29876 30178
AFE87985.1 JQ740811_p41 hypothetical protein phrog_13331 unknown function unknown function -1 24188 24508
AFE87947.1 JQ740811_p3 terminase large subunit phrog_9 terminase large subunit head and packaging 1 1004 2626
AFE87968.1 JQ740811_p24 hypothetical protein phrog_3874 transglycosylase other -1 18213 18761
AFE87980.1 JQ740811_p36 hypothetical protein phrog_3972 unknown function unknown function -1 21620 21970
AFE87973.1 JQ740811_p29 hypothetical protein phrog_2530 unknown function unknown function -1 19956 20147
AFE87977.1 JQ740811_p33 early protein phrog_1225 unknown function unknown function -1 21046 21354
AFE87948.1 JQ740811_p4 HNH endonuclease phrog_119 HNH endonuclease DNA, RNA and nucleotide metabolism 1 2616 2900
AFE87949.1 JQ740811_p5 portal protein phrog_12 portal protein head and packaging 1 2913 4049
AFE88000.1 JQ740811_p56 hypothetical protein phrog_1952 unknown function unknown function 1 30498 30638
AFE87994.1 JQ740811_p50 DNA polymerase subunit phrog_1284 unknown function unknown function -1 27337 28287
AFE87966.1 JQ740811_p22 bifunctional anti-holin / holin phrog_1379 unknown function unknown function 1 17061 17414
AFE87959.1 JQ740811_p15 structural protein phrog_1420 virion structural protein head and packaging 1 10458 10733
AFE87974.1 JQ740811_p30 early protein phrog_1509 unknown function unknown function -1 20189 20440
AFE87987.1 JQ740811_p43 early protein phrog_1278 single strand DNA binding protein DNA, RNA and nucleotide metabolism -1 24733 25092
AFE87951.1 JQ740811_p7 structural protein phrog_1393 minor head protein head and packaging 1 4559 5740
AFE87984.1 JQ740811_p40 hypothetical protein phrog_1317 unknown function unknown function -1 23635 24168
AFE87972.1 JQ740811_p28 hypothetical protein phrog_1820 unknown function unknown function -1 19778 19954
AFE87986.1 JQ740811_p42 hypothetical protein phrog_1295 unknown function unknown function -1 24505 24720
AFE87958.1 JQ740811_p14 major capsid protein phrog_1433 major tail protein tail 1 9514 10419
AFE87999.1 JQ740811_p55 hypothetical protein phrog_1656 unknown function unknown function -1 30179 30367
AFE87960.1 JQ740811_p16 structural protein phrog_1421 virion structural protein head and packaging 1 10753 11265
AFE87964.1 JQ740811_p20 hypothetical protein phrog_1434 unknown function unknown function 1 15962 16255
AFE87995.1 JQ740811_p51 hypothetical protein phrog_2541 unknown function unknown function -1 28280 28501
AFE87954.1 JQ740811_p10 structural protein phrog_1484 virion structural protein head and packaging 1 6328 6663
AFE87956.1 JQ740811_p12 neck passage structure protein phrog_7918 neck passage structure protein connector 1 7079 9319
AFE87945.1 JQ740811_p1 terminase small subunit phrog_1437 terminase small subunit head and packaging 1 241 765
AFE87950.1 JQ740811_p6 protease phrog_80 head maturation protease head and packaging 1 4030 4566
AFE87971.1 JQ740811_p27 hypothetical protein phrog_1441 unknown function unknown function -1 19611 19778
AFE87955.1 JQ740811_p11 structural protein phrog_1440 virion structural protein head and packaging 1 6657 7022
AFE87962.1 JQ740811_p18 hypothetical protein phrog_1424 tail protein tail 1 13949 14845
AFE87991.1 JQ740811_p47 hypothetical protein phrog_1632 unknown function unknown function -1 26370 26657
AFE87996.1 JQ740811_p52 hypothetical protein phrog_12718 unknown function unknown function -1 28571 28750
AFE87976.1 JQ740811_p32 hypothetical protein phrog_6037 unknown function unknown function -1 20772 20987
AFE87979.1 JQ740811_p35 hypothetical protein phrog_17643 unknown function unknown function -1 21510 21623
AFE87967.1 JQ740811_p23 lysin phrog_670 endolysin lysis 1 17411 18115
AFE87983.1 JQ740811_p39 hypothetical protein phrog_9706 unknown function unknown function -1 23409 23594
AFE87969.1 JQ740811_p25 hypothetical protein phrog_1430 unknown function unknown function -1 18822 19091