Genomic map of Saccharomonospora phage PIS 136 (JX006077)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
JX006077
Definition
Saccharomonospora phage PIS 136, complete genome.
Molecule type
DNA
Genome structure
circular
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae.
DB of origin
PVOG
Length
94870
Host Name
Saccharomonospora
Host domain
Bacteria
Is prophage?
undef
Number of proteins
132
%GC
65.88
Number of singletons
93
Number of paralogs
2

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
AFM10416.1 JX006077_p27 hypothetical protein singleton unknown function unknown function -1 28895 29056
AFM10473.1 JX006077_p84 hypothetical protein singleton unknown function unknown function 1 61154 61363
AFM10488.1 JX006077_p99 hypothetical protein singleton unknown function unknown function 1 72479 72799
AFM10420.1 JX006077_p31 hypothetical protein singleton unknown function unknown function 1 30675 30806
AFM10479.1 JX006077_p90 transposase phrog_506 transposase integration and excision 1 64095 65081
AFM10494.1 JX006077_p105 hypothetical protein singleton unknown function unknown function 1 75540 75770
AFM10452.1 JX006077_p63 hypothetical protein singleton unknown function unknown function 1 48478 48705
AFM10495.1 JX006077_p106 hypothetical protein singleton unknown function unknown function -1 75772 75939
AFM10429.1 JX006077_p40 hypothetical protein singleton unknown function unknown function 1 34821 35813
AFM10411.1 JX006077_p22 hypothetical protein phrog_859 portal protein head and packaging -1 21466 24219
AFM10506.1 JX006077_p119 hypothetical protein phrog_10815 unknown function unknown function -1 87284 87472
AFM10493.1 JX006077_p104 hypothetical protein singleton unknown function unknown function 1 75427 75567
AFM10427.1 JX006077_p38 hypothetical protein singleton unknown function unknown function -1 33660 33935
AFM10466.1 JX006077_p77 replicative DNA helicase phrog_19 DnaB-like replicative helicase DNA, RNA and nucleotide metabolism -1 55665 57068
AFM10491.1 JX006077_p102 hypothetical protein phrog_1366 unknown function unknown function 1 74226 75098
AFM10484.1 JX006077_p95 transcriptional regulator singleton unknown function unknown function -1 69929 70045
AFM10486.1 JX006077_p97 hypothetical protein singleton unknown function unknown function -1 70580 71176
AFM10515.1 JX006077_p128 hypothetical protein singleton unknown function unknown function 1 92046 92699
AFM10407.1 JX006077_p18 Epstein-Barr nuclear antigen 1 phrog_779 unknown function unknown function -1 18274 19128
AFM10408.1 JX006077_p19 hypothetical protein phrog_777 major head protein head and packaging -1 19243 21045
AFM10406.1 JX006077_p17 Pas16 phrog_792 major tail protein tail -1 17541 18263
AFM10472.1 JX006077_p83 DNA polymerase III epsilon subunit phrog_192 DNA polymerase exonuclease subunit DNA, RNA and nucleotide metabolism 1 60447 61157
AFM10508.1 JX006077_p121 hypothetical protein singleton unknown function unknown function 1 88451 88738
AFM10414.1 JX006077_p25 hypothetical protein phrog_38 terminase large subunit head and packaging -1 26674 28074
AFM10440.1 JX006077_p51 hypothetical protein singleton unknown function unknown function 1 42303 43130
AFM10502.1 JX006077_p115 hypothetical protein phrog_9961 unknown function unknown function -1 84628 84873
AFM10505.1 JX006077_p118 protein-L-isoaspartate carboxylmethyltransferase singleton unknown function unknown function -1 86694 87173
AFM10391.1 JX006077_p2 hypothetical protein phrog_18824 unknown function unknown function -1 1080 3905
AFM10395.1 JX006077_p6 hypothetical protein phrog_838 unknown function unknown function -1 5724 7040
AFM10478.1 JX006077_p89 hypothetical protein singleton unknown function unknown function -1 63908 64501
AFM10401.1 JX006077_p12 hypothetical protein singleton unknown function unknown function 1 13975 15339
AFM10438.1 JX006077_p49 hypothetical protein singleton unknown function unknown function 1 42148 42303
AFM10441.1 JX006077_p52 hypothetical protein singleton unknown function unknown function 1 43127 43405
AFM10424.1 JX006077_p35 hypothetical protein singleton unknown function unknown function -1 32215 33123
AFM10457.1 JX006077_p68 hypothetical protein phrog_14658 unknown function unknown function -1 50641 50973
AFM10437.1 JX006077_p48 hypothetical protein singleton unknown function unknown function -1 41968 42252
AFM10419.1 JX006077_p30 hypothetical protein singleton unknown function unknown function -1 29951 30064
AFM10482.1 JX006077_p93 DEAD-like helicase superfamily protein phrog_16 DNA helicase DNA, RNA and nucleotide metabolism 1 67475 69199
AFM10496.1 JX006077_p107 endonuclease phrog_740 HNH endonuclease DNA, RNA and nucleotide metabolism 1 76408 76758
AFM10511.1 JX006077_p124 L-aspartate dehydrogenase singleton unknown function unknown function 1 89371 89943
AFM10422.1 JX006077_p33 hypothetical protein phrog_3849 unknown function unknown function -1 31346 31744
AFM10431.1 JX006077_p42 hypothetical protein singleton unknown function unknown function -1 37673 37825
AFM10396.1 JX006077_p7 hypothetical protein phrog_305 tail length tape measure protein tail -1 7044 9764
AFM10456.1 JX006077_p67 hypothetical protein singleton unknown function unknown function -1 50324 50554
AFM10436.1 JX006077_p47 hypothetical protein singleton unknown function unknown function 1 41560 41775
AFM10447.1 JX006077_p58 hypothetical protein singleton unknown function unknown function 1 46338 46598
AFM10434.1 JX006077_p45 hypothetical protein singleton unknown function unknown function 1 38307 39758
AFM10425.1 JX006077_p36 WhiB phrog_472 WhiB transcriptional factor transcription regulation -1 32907 33155
AFM10480.1 JX006077_p91 hypothetical protein singleton unknown function unknown function 1 65443 65646
AFM10405.1 JX006077_p16 hypothetical protein singleton unknown function unknown function 1 17337 18140
AFM10410.1 JX006077_p21 hypothetical protein singleton unknown function unknown function -1 21281 21463
AFM10517.1 JX006077_p130 hypothetical protein singleton unknown function unknown function -1 93238 93522
AFM10448.1 JX006077_p59 hypothetical protein singleton unknown function unknown function 1 46673 46876
AFM10413.1 JX006077_p24 hypothetical protein phrog_781 unknown function unknown function -1 26252 26611
AFM10462.1 JX006077_p73 hypothetical protein singleton unknown function unknown function 1 53074 53448
AFM10461.1 JX006077_p72 hypothetical protein singleton unknown function unknown function 1 52599 53048
AFM10453.1 JX006077_p64 hypothetical protein singleton unknown function unknown function 1 48812 49504
AFM10459.1 JX006077_p70 polysaccharide biosynthesis protein CpsM (V) singleton unknown function unknown function 1 51755 52051
AFM10463.1 JX006077_p74 hypothetical protein singleton unknown function unknown function -1 53106 53513
AFM10474.1 JX006077_p85 inorganic pyrophosphatase singleton unknown function unknown function 1 61376 62227
AFM10460.1 JX006077_p71 hypothetical protein singleton unknown function unknown function -1 52139 52906
AFM10443.1 JX006077_p54 hypothetical protein singleton unknown function unknown function 1 43787 44086
AFM10465.1 JX006077_p76 hypothetical protein singleton unknown function unknown function -1 55499 55654
AFM10421.1 JX006077_p32 hypothetical protein singleton unknown function unknown function -1 30896 31153
AFM10393.1 JX006077_p4 hypothetical protein singleton unknown function unknown function 1 4230 4529
AFM10516.1 JX006077_p129 hypothetical protein singleton unknown function unknown function 1 92926 93048
AFM10509.1 JX006077_p122 hypothetical protein singleton unknown function unknown function 1 88594 88914
AFM10409.1 JX006077_p20 hypothetical protein singleton unknown function unknown function 1 20573 21109
AFM10450.1 JX006077_p61 hypothetical protein singleton unknown function unknown function -1 47843 48280
AFM10490.1 JX006077_p101 hypothetical protein singleton unknown function unknown function -1 73967 74257
AFM10446.1 JX006077_p57 hypothetical protein singleton unknown function unknown function -1 45928 46263
AFM10398.1 JX006077_p9 hypothetical protein phrog_5 tail completion or Neck1 protein connector -1 11009 11428
AFM10418.1 JX006077_p29 hypothetical protein singleton unknown function unknown function -1 29543 29857
AFM10487.1 JX006077_p98 hypothetical protein singleton unknown function unknown function -1 71638 72159
AFM10423.1 JX006077_p34 hypothetical protein singleton unknown function unknown function -1 31744 31848
AFM10477.1 JX006077_p88 ISHa1942 transposase A-like protein phrog_2577 transposase integration and excision -1 63406 63825
AFM10444.1 JX006077_p55 transposase-like protein phrog_2577 transposase integration and excision 1 44385 44783
AFM10471.1 JX006077_p82 hypothetical protein singleton unknown function unknown function -1 60315 60887
AAM21921.1 JX006077_p111 integrase phrog_1 integrase integration and excision 1 78908 80128
AFM10428.1 JX006077_p39 hypothetical protein singleton unknown function unknown function -1 33968 35002
AFM10467.1 JX006077_p78 hypothetical protein singleton unknown function unknown function -1 57152 57553
AFM10451.1 JX006077_p62 hypothetical protein singleton unknown function unknown function 1 47870 48478
AFM10476.1 JX006077_p87 hypothetical protein singleton unknown function unknown function 1 62984 63277
AFM10504.1 JX006077_p117 protein-L-isoaspartate methyltransferase singleton unknown function unknown function -1 86452 86586
AFM10492.1 JX006077_p103 hypothetical protein singleton unknown function unknown function 1 75233 75430
AFM10404.1 JX006077_p15 ExsB phrog_1550 QueC-like queuosine biosynthesis moron, auxiliary metabolic gene and host takeover -1 16734 17420
AFM10469.1 JX006077_p80 hypothetical protein singleton unknown function unknown function 1 58964 59236
AFM10435.1 JX006077_p46 hypothetical protein singleton unknown function unknown function 1 41059 41538
AFM10481.1 JX006077_p92 hypothetical protein phrog_5931 unknown function unknown function 1 66554 67255
AFM10394.1 JX006077_p5 PE-PGRS family protein phrog_837 minor tail protein tail -1 4675 5724
AFM10455.1 JX006077_p66 hypothetical protein singleton unknown function unknown function -1 49641 50267
AFM10430.1 JX006077_p41 FtsK Spo IIIE protein singleton unknown function unknown function -1 35115 37676
AFM10499.1 JX006077_p110 deoxycytidine triphosphate deaminase singleton unknown function unknown function -1 78575 78775
AFM10417.1 JX006077_p28 integration host factor MihF singleton unknown function unknown function 1 29065 29478
AFM10433.1 JX006077_p44 hypothetical protein singleton unknown function unknown function -1 38102 38884
AFM10390.1 JX006077_p1 hypothetical protein singleton unknown function unknown function -1 596 1075
AFM10507.1 JX006077_p120 helix-turn-helix domain protein phrog_9908 DNA binding protein DNA, RNA and nucleotide metabolism -1 87469 88317
AFM10510.1 JX006077_p123 hypothetical protein singleton unknown function unknown function 1 88911 89129
AFM10483.1 JX006077_p94 hypothetical protein singleton unknown function unknown function 1 69340 69804
AFM10432.1 JX006077_p43 hypothetical protein singleton unknown function unknown function -1 37785 38171
AFM10426.1 JX006077_p37 hypothetical protein singleton unknown function unknown function -1 33260 33463
AFM10458.1 JX006077_p69 hypothetical protein singleton unknown function unknown function -1 51056 51505
AFM10454.1 JX006077_p65 membrane bound metal dependent hydrolase phrog_20744 hydrolase other 1 49504 50253
AFM10475.1 JX006077_p86 hypothetical protein singleton unknown function unknown function 1 62436 62735
AFM10512.1 JX006077_p125 hypothetical protein singleton unknown function unknown function -1 90240 90791
AFM10464.1 JX006077_p75 hypothetical protein singleton unknown function unknown function -1 55026 55346
AFM10392.1 JX006077_p3 hypothetical protein singleton unknown function unknown function -1 4086 4358
AFM10439.1 JX006077_p50 hypothetical protein singleton unknown function unknown function -1 42252 42797
AFM10519.1 JX006077_p132 hypothetical protein singleton unknown function unknown function -1 93918 94715
AFM10498.1 JX006077_p109 deoxycytidine triphosphate deaminase phrog_1663 dCTP deaminase DNA, RNA and nucleotide metabolism 1 77938 78519
AFM10449.1 JX006077_p60 hypothetical protein phrog_1198 MutT/NUDIX hydrolase other 1 47043 47393
AFM10501.1 JX006077_p114 hypothetical protein singleton unknown function unknown function 1 84330 84578
AFM10399.1 JX006077_p10 hypothetical protein phrog_783 head-tail adaptor connector -1 11977 12792
AFM10518.1 JX006077_p131 hypothetical protein singleton unknown function unknown function -1 93589 93921
AFM10489.1 JX006077_p100 phage type endonuclease phrog_434 RecE-like recombination exonuclease DNA, RNA and nucleotide metabolism 1 72966 73970
AFM10497.1 JX006077_p108 VRR-NUC domain containing protein phrog_93 endonuclease DNA, RNA and nucleotide metabolism 1 76890 77222
AFM10503.1 JX006077_p116 hypothetical protein singleton unknown function unknown function 1 85260 85589
AFM10468.1 JX006077_p79 hypothetical protein singleton unknown function unknown function -1 57553 58965
AFM10397.1 JX006077_p8 hypothetical protein singleton unknown function unknown function 1 9862 11148
AFM10400.1 JX006077_p11 hypothetical protein singleton unknown function unknown function 1 13204 13920
AFM10415.1 JX006077_p26 hypothetical protein singleton unknown function unknown function -1 28266 28769
AFM10445.1 JX006077_p56 IS891/IS1136/IS1341 family transposase phrog_506 transposase integration and excision 1 44799 46016
AFM10470.1 JX006077_p81 DNA methylase phrog_116 DNA methyltransferase other 1 59233 60438
AFM10412.1 JX006077_p23 Pas4 phrog_776 portal protein head and packaging -1 24212 26086
AFM10513.1 JX006077_p126 hypothetical protein singleton unknown function unknown function -1 90792 91076
AFM10442.1 JX006077_p53 hypothetical protein singleton unknown function unknown function 1 43464 43730
AFM10514.1 JX006077_p127 protoporphyrin IX magnesium chelatase subunit chl I singleton unknown function unknown function -1 91093 91824
AAL66178.2 JX006077_p112 DNA polymerase III alpha subunit phrog_405 DNA polymerase DNA, RNA and nucleotide metabolism 1 80528 84244
AFM10403.1 JX006077_p14 cyanophycin synthetase phrog_2599 ribosomal protein S6 glutaminyl transferase moron, auxiliary metabolic gene and host takeover -1 15985 16734
AFM10500.1 JX006077_p113 Na+/proline symporter singleton unknown function unknown function -1 81185 84331
AFM10402.1 JX006077_p13 hypothetical protein singleton unknown function unknown function -1 15406 15747
AFM10485.1 JX006077_p96 hypothetical protein singleton unknown function unknown function 1 70282 70569