Genomic map of Mycobacterium virus Astro (JX015524)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
JX015524
Definition
Mycobacterium virus Astro, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Fromanvirus.
DB of origin
PVOG
Length
52494
Host Name
Mycobacterium smegmatis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
99
%GC
61.38
Number of singletons
0
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
AFM54963.1 JX015524_p73 hypothetical protein phrog_289 GTP-binding domain other -1 40969 41340
AFM54939.1 JX015524_p46 ribonucleotide reductase phrog_367 ribonucleotide reductase DNA, RNA and nucleotide metabolism -1 31923 33968
AFM54919.1 JX015524_p24 minor tail subunit phrog_352 minor tail protein tail 1 20465 20911
AFM54959.1 JX015524_p69 hypothetical protein phrog_18779 unknown function unknown function -1 40302 40430
AFM54908.1 JX015524_p11 scaffolding protein phrog_233 head scaffolding protein head and packaging 1 9843 10349
AFM54943.1 JX015524_p50 hypothetical protein phrog_5897 unknown function unknown function -1 34486 34575
AFM54912.1 JX015524_p15 hypothetical protein phrog_320 head closure Hc1 connector 1 11894 12253
AFM54948.1 JX015524_p56 hypothetical protein phrog_5242 unknown function unknown function -1 36906 37187
AFM54987.1 JX015524_p3 hypothetical protein phrog_1260 minor tail protein tail 1 1344 2309
AFM54944.1 JX015524_p51 hypothetical protein phrog_354 sigma-K factor transcription regulation -1 34575 35198
AFM54992.1 JX015524_p26 minor tail subunit phrog_404 minor tail protein tail 1 21234 21515
AFM54957.1 JX015524_p67 hypothetical protein phrog_8372 unknown function unknown function -1 39965 40147
AFM54965.1 JX015524_p76 DnaB-like helicase phrog_243 DnaB-like replicative helicase DNA, RNA and nucleotide metabolism -1 42586 43386
AFM54925.1 JX015524_p32 hypothetical protein phrog_6549 unknown function unknown function -1 26291 26479
AFM54984.1 JX015524_p97 hypothetical protein phrog_1445 unknown function unknown function -1 50530 50607
AFM54953.1 JX015524_p63 EndoVII phrog_307 endonuclease VII DNA, RNA and nucleotide metabolism -1 39004 39492
AFM54914.1 JX015524_p17 hypothetical protein phrog_123 tail terminator connector 1 12618 13025
AFM54993.1 JX015524_p31 cytidine deaminase phrog_174 dCMP deaminase DNA, RNA and nucleotide metabolism -1 25705 26313
AFM54946.1 JX015524_p54 hypothetical protein phrog_2387 nucleotide kinase other -1 36168 36581
AFM54975.1 JX015524_p88 hypothetical protein phrog_5476 unknown function unknown function -1 47336 47641
AFM54961.1 JX015524_p71 hypothetical protein phrog_1123 unknown function unknown function -1 40527 40781
AFM54927.1 JX015524_p34 hypothetical protein phrog_980 unknown function unknown function -1 26682 26960
AFM54967.1 JX015524_p78 hypothetical protein phrog_2903 unknown function unknown function -1 43531 43758
AFM54998.1 JX015524_p59 DNA primase phrog_360 DNA primase DNA, RNA and nucleotide metabolism -1 37961 38374
AFM54968.1 JX015524_p79 hypothetical protein phrog_520 unknown function unknown function -1 43805 44089
AFM54958.1 JX015524_p68 hypothetical protein phrog_3369 unknown function unknown function -1 40144 40305
AFM54930.1 JX015524_p37 hypothetical protein phrog_15233 unknown function unknown function -1 27583 27858
AFM54935.1 JX015524_p42 hypothetical protein phrog_762 unknown function unknown function -1 30550 30852
AFM54909.1 JX015524_p12 major capsid protein phrog_10 major head protein head and packaging 1 10381 11331
AFM54913.1 JX015524_p16 hypothetical protein phrog_321 tail completion or Neck1 protein connector 1 12253 12621
AFM54960.1 JX015524_p70 hypothetical protein phrog_19854 unknown function unknown function -1 40417 40539
AFM54989.1 JX015524_p83 immunity repressor phrog_357 transcriptional repressor transcription regulation -1 45541 46044
AFM54940.1 JX015524_p47 hypothetical protein phrog_13215 unknown function unknown function -1 33961 34143
AFM54974.1 JX015524_p87 hypothetical protein phrog_5561 unknown function unknown function -1 47155 47334
AFM54973.1 JX015524_p86 hypothetical protein phrog_5066 unknown function unknown function -1 46877 47140
AFM54956.1 JX015524_p66 hypothetical protein phrog_1498 unknown function unknown function -1 39795 39968
AFM54951.1 JX015524_p61 hypothetical protein phrog_19096 unknown function unknown function -1 38527 38856
AFM54981.1 JX015524_p94 hypothetical protein phrog_12994 unknown function unknown function -1 49652 49957
AFM54990.1 JX015524_p19 tail assembly chaperone phrog_393 tail assembly chaperone tail 1 13754 14556
AFM54999.1 JX015524_p1 HNH endonuclease domain protein phrog_333 HNH endonuclease DNA, RNA and nucleotide metabolism 1 505 798
AFM54902.1 JX015524_p4 hypothetical protein phrog_1197 tail protein tail 1 2306 3343
AFM54929.1 JX015524_p36 hypothetical protein phrog_383 unknown function unknown function -1 27144 27596
AFM54985.1 JX015524_p98 hypothetical protein phrog_9783 unknown function unknown function -1 50709 50795
AFM54906.1 JX015524_p9 terminase phrog_104 portal protein head and packaging 1 7458 8888
AFM54901.1 JX015524_p2 hypothetical protein phrog_226 minor tail protein tail 1 834 1262
AFM54962.1 JX015524_p72 hypothetical protein phrog_1374 unknown function unknown function -1 40778 40939
AFM54983.1 JX015524_p96 hypothetical protein phrog_16745 unknown function unknown function -1 50272 50499
AFM54954.1 JX015524_p64 hypothetical protein phrog_19806 unknown function unknown function -1 39479 39664
AFM54932.1 JX015524_p39 hypothetical protein phrog_1545 unknown function unknown function -1 28079 28237
AFM54988.1 JX015524_p6 lysin A phrog_1512 endolysin lysis 1 4196 4876
AFM54955.1 JX015524_p65 hypothetical protein phrog_16665 unknown function unknown function -1 39661 39798
AFM54922.1 JX015524_p28 structural protein phrog_2697 unknown function unknown function -1 23289 23519
AFM54924.1 JX015524_p30 Xis phrog_733 excisionase integration and excision 1 25165 25587
AFM54938.1 JX015524_p45 hypothetical protein phrog_364 ribonucleoside reductase class II DNA, RNA and nucleotide metabolism -1 31377 31898
AFM54978.1 JX015524_p91 hypothetical protein phrog_2124 unknown function unknown function -1 48093 48233
AFM54996.1 JX015524_p74 phosphoribosyltransferase phrog_2068 phosphoribosyl transferase other -1 41365 42084
AFM54933.1 JX015524_p40 hypothetical protein phrog_2650 unknown function unknown function -1 28237 28677
AFM54986.1 JX015524_p99 hypothetical protein phrog_3471 unknown function unknown function -1 50853 51065
AFM54995.1 JX015524_p57 hypothetical protein phrog_5270 unknown function unknown function -1 37184 37501
AFM54979.1 JX015524_p92 ArdA-like antirestriction protein phrog_2059 anti-restriction protein moron, auxiliary metabolic gene and host takeover -1 48250 48792
AFM54903.1 JX015524_p5 hypothetical protein phrog_356 minor tail protein tail 1 3347 4006
AFM54991.1 JX015524_p22 minor tail subunit phrog_106 minor tail protein tail 1 17636 18658
AFM54904.1 JX015524_p7 holin phrog_102 endolysin lysis 1 4873 5682
AFM54997.1 JX015524_p81 RecB-like protein phrog_69 exonuclease DNA, RNA and nucleotide metabolism -1 44449 45252
AFM54972.1 JX015524_p85 hypothetical protein phrog_1178 unknown function unknown function -1 46638 46880
AFM54970.1 JX015524_p82 hypothetical protein phrog_4421 unknown function unknown function -1 45254 45517
AFM54966.1 JX015524_p77 hypothetical protein phrog_20834 unknown function unknown function -1 43388 43534
AFM54923.1 JX015524_p29 integrase phrog_95 integrase integration and excision -1 23516 25018
AFM54910.1 JX015524_p13 hypothetical protein phrog_137 head-tail adaptor Ad1 connector 1 11398 11772
AFM54980.1 JX015524_p93 hypothetical protein phrog_11344 unknown function unknown function -1 48837 49649
AFM54941.1 JX015524_p48 hypothetical protein phrog_499 unknown function unknown function -1 34140 34301
AFM54947.1 JX015524_p55 hypothetical protein phrog_4195 unknown function unknown function -1 36574 36909
AFM54931.1 JX015524_p38 hypothetical protein phrog_6689 unknown function unknown function -1 27897 28079
AFM54982.1 JX015524_p95 hypothetical protein phrog_5371 unknown function unknown function -1 50027 50275
AFM54928.1 JX015524_p35 hypothetical protein phrog_21271 unknown function unknown function -1 26953 27147
AFM54936.1 JX015524_p43 hypothetical protein phrog_517 HTH DNA binding protein DNA, RNA and nucleotide metabolism -1 30849 31145
AFM54907.1 JX015524_p10 capsid maturation protease phrog_193 head maturation protease head and packaging 1 8885 9787
AFM54926.1 JX015524_p33 hypothetical protein phrog_542 unknown function unknown function -1 26479 26685
AFM54969.1 JX015524_p80 hypothetical protein phrog_642 unknown function unknown function -1 44070 44417
AFM54916.1 JX015524_p20 tail assembly chaperone phrog_330 tail assembly chaperone tail 1 13754 14119
AFM54964.1 JX015524_p75 hypothetical protein phrog_478 site-specific recombination directionality factor RDF integration and excision -1 42107 42589
AFM54918.1 JX015524_p23 minor tail subunit phrog_110 minor tail protein tail 1 18655 20445
AFM54971.1 JX015524_p84 hypothetical protein phrog_5644 unknown function unknown function -1 46272 46634
AFM54949.1 JX015524_p58 DNA primase phrog_47 DNA primase DNA, RNA and nucleotide metabolism -1 37498 38151
AFM54942.1 JX015524_p49 hypothetical protein phrog_1454 unknown function unknown function -1 34301 34486
AFM54921.1 JX015524_p27 minor tail subunit phrog_2689 minor tail protein tail 1 21515 23236
AFM54945.1 JX015524_p52 metallophosphoesterase phrog_221 metallo-phosphoesterase other -1 35202 35969
AFM54976.1 JX015524_p89 hypothetical protein phrog_1477 unknown function unknown function -1 47760 47879
AFM54977.1 JX015524_p90 hypothetical protein phrog_9135 unknown function unknown function -1 47876 48091
AFM54934.1 JX015524_p41 DNA polymerase phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism -1 28698 30542
AFM54950.1 JX015524_p60 hypothetical protein phrog_20021 unknown function unknown function -1 38367 38525
AFM54952.1 JX015524_p62 hypothetical protein phrog_4670 unknown function unknown function -1 38853 38975
AFM54911.1 JX015524_p14 hypothetical protein phrog_2348 unknown function unknown function 1 11769 11897
AFM54917.1 JX015524_p21 tape measure protein phrog_305 tail length tape measure protein tail 1 14549 17626
AFM54920.1 JX015524_p25 minor tail subunit phrog_981 minor tail protein tail 1 20926 21237
AFM54905.1 JX015524_p8 lysin B phrog_9 terminase large subunit head and packaging 1 5704 7458
AFM54994.1 JX015524_p53 hypothetical protein phrog_17770 unknown function unknown function -1 35966 36175
AFM54915.1 JX015524_p18 major tail subunit phrog_117 major tail protein tail 1 13039 13641
AFM54937.1 JX015524_p44 HTH DNA binding domain phrog_21644 DNA binding protein DNA, RNA and nucleotide metabolism -1 31138 31320