| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
JX015524 |
Definition |
Mycobacterium virus Astro, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Fromanvirus. |
DB of origin |
PVOG |
Length |
52494 |
Host Name |
Mycobacterium smegmatis |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
99 |
%GC |
61.38 |
Number of singletons |
0 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| AFM54963.1 | JX015524_p73 | hypothetical protein | phrog_289 | GTP-binding domain | other | -1 | 40969 | 41340 |
| AFM54939.1 | JX015524_p46 | ribonucleotide reductase | phrog_367 | ribonucleotide reductase | DNA, RNA and nucleotide metabolism | -1 | 31923 | 33968 |
| AFM54919.1 | JX015524_p24 | minor tail subunit | phrog_352 | minor tail protein | tail | 1 | 20465 | 20911 |
| AFM54959.1 | JX015524_p69 | hypothetical protein | phrog_18779 | unknown function | unknown function | -1 | 40302 | 40430 |
| AFM54908.1 | JX015524_p11 | scaffolding protein | phrog_233 | head scaffolding protein | head and packaging | 1 | 9843 | 10349 |
| AFM54943.1 | JX015524_p50 | hypothetical protein | phrog_5897 | unknown function | unknown function | -1 | 34486 | 34575 |
| AFM54912.1 | JX015524_p15 | hypothetical protein | phrog_320 | head closure Hc1 | connector | 1 | 11894 | 12253 |
| AFM54948.1 | JX015524_p56 | hypothetical protein | phrog_5242 | unknown function | unknown function | -1 | 36906 | 37187 |
| AFM54987.1 | JX015524_p3 | hypothetical protein | phrog_1260 | minor tail protein | tail | 1 | 1344 | 2309 |
| AFM54944.1 | JX015524_p51 | hypothetical protein | phrog_354 | sigma-K factor | transcription regulation | -1 | 34575 | 35198 |
| AFM54992.1 | JX015524_p26 | minor tail subunit | phrog_404 | minor tail protein | tail | 1 | 21234 | 21515 |
| AFM54957.1 | JX015524_p67 | hypothetical protein | phrog_8372 | unknown function | unknown function | -1 | 39965 | 40147 |
| AFM54965.1 | JX015524_p76 | DnaB-like helicase | phrog_243 | DnaB-like replicative helicase | DNA, RNA and nucleotide metabolism | -1 | 42586 | 43386 |
| AFM54925.1 | JX015524_p32 | hypothetical protein | phrog_6549 | unknown function | unknown function | -1 | 26291 | 26479 |
| AFM54984.1 | JX015524_p97 | hypothetical protein | phrog_1445 | unknown function | unknown function | -1 | 50530 | 50607 |
| AFM54953.1 | JX015524_p63 | EndoVII | phrog_307 | endonuclease VII | DNA, RNA and nucleotide metabolism | -1 | 39004 | 39492 |
| AFM54914.1 | JX015524_p17 | hypothetical protein | phrog_123 | tail terminator | connector | 1 | 12618 | 13025 |
| AFM54993.1 | JX015524_p31 | cytidine deaminase | phrog_174 | dCMP deaminase | DNA, RNA and nucleotide metabolism | -1 | 25705 | 26313 |
| AFM54946.1 | JX015524_p54 | hypothetical protein | phrog_2387 | nucleotide kinase | other | -1 | 36168 | 36581 |
| AFM54975.1 | JX015524_p88 | hypothetical protein | phrog_5476 | unknown function | unknown function | -1 | 47336 | 47641 |
| AFM54961.1 | JX015524_p71 | hypothetical protein | phrog_1123 | unknown function | unknown function | -1 | 40527 | 40781 |
| AFM54927.1 | JX015524_p34 | hypothetical protein | phrog_980 | unknown function | unknown function | -1 | 26682 | 26960 |
| AFM54967.1 | JX015524_p78 | hypothetical protein | phrog_2903 | unknown function | unknown function | -1 | 43531 | 43758 |
| AFM54998.1 | JX015524_p59 | DNA primase | phrog_360 | DNA primase | DNA, RNA and nucleotide metabolism | -1 | 37961 | 38374 |
| AFM54968.1 | JX015524_p79 | hypothetical protein | phrog_520 | unknown function | unknown function | -1 | 43805 | 44089 |
| AFM54958.1 | JX015524_p68 | hypothetical protein | phrog_3369 | unknown function | unknown function | -1 | 40144 | 40305 |
| AFM54930.1 | JX015524_p37 | hypothetical protein | phrog_15233 | unknown function | unknown function | -1 | 27583 | 27858 |
| AFM54935.1 | JX015524_p42 | hypothetical protein | phrog_762 | unknown function | unknown function | -1 | 30550 | 30852 |
| AFM54909.1 | JX015524_p12 | major capsid protein | phrog_10 | major head protein | head and packaging | 1 | 10381 | 11331 |
| AFM54913.1 | JX015524_p16 | hypothetical protein | phrog_321 | tail completion or Neck1 protein | connector | 1 | 12253 | 12621 |
| AFM54960.1 | JX015524_p70 | hypothetical protein | phrog_19854 | unknown function | unknown function | -1 | 40417 | 40539 |
| AFM54989.1 | JX015524_p83 | immunity repressor | phrog_357 | transcriptional repressor | transcription regulation | -1 | 45541 | 46044 |
| AFM54940.1 | JX015524_p47 | hypothetical protein | phrog_13215 | unknown function | unknown function | -1 | 33961 | 34143 |
| AFM54974.1 | JX015524_p87 | hypothetical protein | phrog_5561 | unknown function | unknown function | -1 | 47155 | 47334 |
| AFM54973.1 | JX015524_p86 | hypothetical protein | phrog_5066 | unknown function | unknown function | -1 | 46877 | 47140 |
| AFM54956.1 | JX015524_p66 | hypothetical protein | phrog_1498 | unknown function | unknown function | -1 | 39795 | 39968 |
| AFM54951.1 | JX015524_p61 | hypothetical protein | phrog_19096 | unknown function | unknown function | -1 | 38527 | 38856 |
| AFM54981.1 | JX015524_p94 | hypothetical protein | phrog_12994 | unknown function | unknown function | -1 | 49652 | 49957 |
| AFM54990.1 | JX015524_p19 | tail assembly chaperone | phrog_393 | tail assembly chaperone | tail | 1 | 13754 | 14556 |
| AFM54999.1 | JX015524_p1 | HNH endonuclease domain protein | phrog_333 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 505 | 798 |
| AFM54902.1 | JX015524_p4 | hypothetical protein | phrog_1197 | tail protein | tail | 1 | 2306 | 3343 |
| AFM54929.1 | JX015524_p36 | hypothetical protein | phrog_383 | unknown function | unknown function | -1 | 27144 | 27596 |
| AFM54985.1 | JX015524_p98 | hypothetical protein | phrog_9783 | unknown function | unknown function | -1 | 50709 | 50795 |
| AFM54906.1 | JX015524_p9 | terminase | phrog_104 | portal protein | head and packaging | 1 | 7458 | 8888 |
| AFM54901.1 | JX015524_p2 | hypothetical protein | phrog_226 | minor tail protein | tail | 1 | 834 | 1262 |
| AFM54962.1 | JX015524_p72 | hypothetical protein | phrog_1374 | unknown function | unknown function | -1 | 40778 | 40939 |
| AFM54983.1 | JX015524_p96 | hypothetical protein | phrog_16745 | unknown function | unknown function | -1 | 50272 | 50499 |
| AFM54954.1 | JX015524_p64 | hypothetical protein | phrog_19806 | unknown function | unknown function | -1 | 39479 | 39664 |
| AFM54932.1 | JX015524_p39 | hypothetical protein | phrog_1545 | unknown function | unknown function | -1 | 28079 | 28237 |
| AFM54988.1 | JX015524_p6 | lysin A | phrog_1512 | endolysin | lysis | 1 | 4196 | 4876 |
| AFM54955.1 | JX015524_p65 | hypothetical protein | phrog_16665 | unknown function | unknown function | -1 | 39661 | 39798 |
| AFM54922.1 | JX015524_p28 | structural protein | phrog_2697 | unknown function | unknown function | -1 | 23289 | 23519 |
| AFM54924.1 | JX015524_p30 | Xis | phrog_733 | excisionase | integration and excision | 1 | 25165 | 25587 |
| AFM54938.1 | JX015524_p45 | hypothetical protein | phrog_364 | ribonucleoside reductase class II | DNA, RNA and nucleotide metabolism | -1 | 31377 | 31898 |
| AFM54978.1 | JX015524_p91 | hypothetical protein | phrog_2124 | unknown function | unknown function | -1 | 48093 | 48233 |
| AFM54996.1 | JX015524_p74 | phosphoribosyltransferase | phrog_2068 | phosphoribosyl transferase | other | -1 | 41365 | 42084 |
| AFM54933.1 | JX015524_p40 | hypothetical protein | phrog_2650 | unknown function | unknown function | -1 | 28237 | 28677 |
| AFM54986.1 | JX015524_p99 | hypothetical protein | phrog_3471 | unknown function | unknown function | -1 | 50853 | 51065 |
| AFM54995.1 | JX015524_p57 | hypothetical protein | phrog_5270 | unknown function | unknown function | -1 | 37184 | 37501 |
| AFM54979.1 | JX015524_p92 | ArdA-like antirestriction protein | phrog_2059 | anti-restriction protein | moron, auxiliary metabolic gene and host takeover | -1 | 48250 | 48792 |
| AFM54903.1 | JX015524_p5 | hypothetical protein | phrog_356 | minor tail protein | tail | 1 | 3347 | 4006 |
| AFM54991.1 | JX015524_p22 | minor tail subunit | phrog_106 | minor tail protein | tail | 1 | 17636 | 18658 |
| AFM54904.1 | JX015524_p7 | holin | phrog_102 | endolysin | lysis | 1 | 4873 | 5682 |
| AFM54997.1 | JX015524_p81 | RecB-like protein | phrog_69 | exonuclease | DNA, RNA and nucleotide metabolism | -1 | 44449 | 45252 |
| AFM54972.1 | JX015524_p85 | hypothetical protein | phrog_1178 | unknown function | unknown function | -1 | 46638 | 46880 |
| AFM54970.1 | JX015524_p82 | hypothetical protein | phrog_4421 | unknown function | unknown function | -1 | 45254 | 45517 |
| AFM54966.1 | JX015524_p77 | hypothetical protein | phrog_20834 | unknown function | unknown function | -1 | 43388 | 43534 |
| AFM54923.1 | JX015524_p29 | integrase | phrog_95 | integrase | integration and excision | -1 | 23516 | 25018 |
| AFM54910.1 | JX015524_p13 | hypothetical protein | phrog_137 | head-tail adaptor Ad1 | connector | 1 | 11398 | 11772 |
| AFM54980.1 | JX015524_p93 | hypothetical protein | phrog_11344 | unknown function | unknown function | -1 | 48837 | 49649 |
| AFM54941.1 | JX015524_p48 | hypothetical protein | phrog_499 | unknown function | unknown function | -1 | 34140 | 34301 |
| AFM54947.1 | JX015524_p55 | hypothetical protein | phrog_4195 | unknown function | unknown function | -1 | 36574 | 36909 |
| AFM54931.1 | JX015524_p38 | hypothetical protein | phrog_6689 | unknown function | unknown function | -1 | 27897 | 28079 |
| AFM54982.1 | JX015524_p95 | hypothetical protein | phrog_5371 | unknown function | unknown function | -1 | 50027 | 50275 |
| AFM54928.1 | JX015524_p35 | hypothetical protein | phrog_21271 | unknown function | unknown function | -1 | 26953 | 27147 |
| AFM54936.1 | JX015524_p43 | hypothetical protein | phrog_517 | HTH DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 30849 | 31145 |
| AFM54907.1 | JX015524_p10 | capsid maturation protease | phrog_193 | head maturation protease | head and packaging | 1 | 8885 | 9787 |
| AFM54926.1 | JX015524_p33 | hypothetical protein | phrog_542 | unknown function | unknown function | -1 | 26479 | 26685 |
| AFM54969.1 | JX015524_p80 | hypothetical protein | phrog_642 | unknown function | unknown function | -1 | 44070 | 44417 |
| AFM54916.1 | JX015524_p20 | tail assembly chaperone | phrog_330 | tail assembly chaperone | tail | 1 | 13754 | 14119 |
| AFM54964.1 | JX015524_p75 | hypothetical protein | phrog_478 | site-specific recombination directionality factor RDF | integration and excision | -1 | 42107 | 42589 |
| AFM54918.1 | JX015524_p23 | minor tail subunit | phrog_110 | minor tail protein | tail | 1 | 18655 | 20445 |
| AFM54971.1 | JX015524_p84 | hypothetical protein | phrog_5644 | unknown function | unknown function | -1 | 46272 | 46634 |
| AFM54949.1 | JX015524_p58 | DNA primase | phrog_47 | DNA primase | DNA, RNA and nucleotide metabolism | -1 | 37498 | 38151 |
| AFM54942.1 | JX015524_p49 | hypothetical protein | phrog_1454 | unknown function | unknown function | -1 | 34301 | 34486 |
| AFM54921.1 | JX015524_p27 | minor tail subunit | phrog_2689 | minor tail protein | tail | 1 | 21515 | 23236 |
| AFM54945.1 | JX015524_p52 | metallophosphoesterase | phrog_221 | metallo-phosphoesterase | other | -1 | 35202 | 35969 |
| AFM54976.1 | JX015524_p89 | hypothetical protein | phrog_1477 | unknown function | unknown function | -1 | 47760 | 47879 |
| AFM54977.1 | JX015524_p90 | hypothetical protein | phrog_9135 | unknown function | unknown function | -1 | 47876 | 48091 |
| AFM54934.1 | JX015524_p41 | DNA polymerase | phrog_17 | DNA polymerase | DNA, RNA and nucleotide metabolism | -1 | 28698 | 30542 |
| AFM54950.1 | JX015524_p60 | hypothetical protein | phrog_20021 | unknown function | unknown function | -1 | 38367 | 38525 |
| AFM54952.1 | JX015524_p62 | hypothetical protein | phrog_4670 | unknown function | unknown function | -1 | 38853 | 38975 |
| AFM54911.1 | JX015524_p14 | hypothetical protein | phrog_2348 | unknown function | unknown function | 1 | 11769 | 11897 |
| AFM54917.1 | JX015524_p21 | tape measure protein | phrog_305 | tail length tape measure protein | tail | 1 | 14549 | 17626 |
| AFM54920.1 | JX015524_p25 | minor tail subunit | phrog_981 | minor tail protein | tail | 1 | 20926 | 21237 |
| AFM54905.1 | JX015524_p8 | lysin B | phrog_9 | terminase large subunit | head and packaging | 1 | 5704 | 7458 |
| AFM54994.1 | JX015524_p53 | hypothetical protein | phrog_17770 | unknown function | unknown function | -1 | 35966 | 36175 |
| AFM54915.1 | JX015524_p18 | major tail subunit | phrog_117 | major tail protein | tail | 1 | 13039 | 13641 |
| AFM54937.1 | JX015524_p44 | HTH DNA binding domain | phrog_21644 | DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 31138 | 31320 |