| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
JX042578 |
Definition |
Mycobacteriophage ElTiger69, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Fromanvirus; unclassified Fromanvirus. |
DB of origin |
PVOG |
Length |
51505 |
Host Name |
Mycobacterium smegmatis |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
92 |
%GC |
59.78 |
Number of singletons |
0 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| AFN37627.1 | JX042578_p11 | scaffolding protein | phrog_233 | head scaffolding protein | head and packaging | 1 | 10089 | 10601 |
| AFN37666.1 | JX042578_p63 | hypothetical protein | phrog_1498 | unknown function | unknown function | -1 | 40190 | 40342 |
| AFN37652.1 | JX042578_p41 | HTH DNA binding domain | phrog_517 | HTH DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 30729 | 30992 |
| AFN37647.1 | JX042578_p34 | hypothetical protein | phrog_980 | unknown function | unknown function | -1 | 26812 | 27021 |
| AFN37645.1 | JX042578_p32 | cytidine deaminase | phrog_174 | dCMP deaminase | DNA, RNA and nucleotide metabolism | -1 | 26170 | 26682 |
| AFN37680.1 | JX042578_p80 | hypothetical protein | phrog_5476 | unknown function | unknown function | -1 | 46189 | 46536 |
| AFN37691.1 | JX042578_p4 | hypothetical protein | phrog_1197 | tail protein | tail | 1 | 2354 | 3403 |
| AFN37646.1 | JX042578_p33 | hypothetical protein | phrog_15643 | unknown function | unknown function | -1 | 26669 | 26812 |
| AFN37651.1 | JX042578_p40 | hypothetical protein | phrog_762 | unknown function | unknown function | -1 | 30352 | 30732 |
| AFN37694.1 | JX042578_p38 | DNA polymerase I | phrog_17 | DNA polymerase | DNA, RNA and nucleotide metabolism | -1 | 28286 | 30184 |
| AFN37622.1 | JX042578_p5 | structural protein | phrog_356 | minor tail protein | tail | 1 | 3407 | 4048 |
| AFN37670.1 | JX042578_p67 | DnaB-like helicase | phrog_243 | DnaB-like replicative helicase | DNA, RNA and nucleotide metabolism | -1 | 41401 | 42207 |
| AFN37703.1 | JX042578_p49 | hypothetical protein | phrog_354 | sigma-K factor | transcription regulation | -1 | 35022 | 35645 |
| AFN37653.1 | JX042578_p42 | ThyX | phrog_85 | thymidylate synthase | DNA, RNA and nucleotide metabolism | -1 | 30985 | 31689 |
| AFN37701.1 | JX042578_p76 | hypothetical protein | phrog_1178 | unknown function | unknown function | -1 | 45328 | 45591 |
| AFN37665.1 | JX042578_p62 | hypothetical protein | phrog_6893 | unknown function | unknown function | -1 | 40110 | 40193 |
| AFN37669.1 | JX042578_p66 | hypothetical protein | phrog_30075 | unknown function | unknown function | -1 | 40946 | 41371 |
| AFN37649.1 | JX042578_p37 | hypothetical protein | phrog_2650 | unknown function | unknown function | -1 | 27795 | 28238 |
| AFN37671.1 | JX042578_p68 | hypothetical protein | phrog_2903 | unknown function | unknown function | -1 | 42194 | 42424 |
| AFN37695.1 | JX042578_p43 | hypothetical protein | phrog_364 | ribonucleoside reductase class II | DNA, RNA and nucleotide metabolism | -1 | 31745 | 32269 |
| AFN37641.1 | JX042578_p26 | hypothetical protein | phrog_404 | minor tail protein | tail | 1 | 21545 | 21865 |
| AFN37657.1 | JX042578_p48 | hypothetical protein | phrog_5897 | unknown function | unknown function | -1 | 34921 | 35022 |
| AFN37635.1 | JX042578_p19 | tail assembly chaperone | phrog_393 | tail assembly chaperone | tail | 1 | 14288 | 15084 |
| AFN37684.1 | JX042578_p87 | hypothetical protein | phrog_6093 | unknown function | unknown function | -1 | 48813 | 48971 |
| AFN37662.1 | JX042578_p54 | hypothetical protein | phrog_5270 | unknown function | unknown function | -1 | 37552 | 37839 |
| AFN37667.1 | JX042578_p64 | hypothetical protein | phrog_8372 | unknown function | unknown function | -1 | 40339 | 40512 |
| AFN37707.1 | JX042578_p57 | hypothetical protein | phrog_5993 | unknown function | unknown function | -1 | 38720 | 38971 |
| AFN37636.1 | JX042578_p21 | tape measure protein | phrog_305 | tail length tape measure protein | tail | 1 | 15089 | 17902 |
| AFN37643.1 | JX042578_p29 | hypothetical protein | phrog_1712 | unknown function | unknown function | -1 | 23638 | 23937 |
| AFN37659.1 | JX042578_p51 | hypothetical protein | phrog_1167 | phosphofructokinase | other | -1 | 36409 | 36876 |
| AFN37711.1 | JX042578_p55 | DNA primase | phrog_47 | DNA primase | DNA, RNA and nucleotide metabolism | -1 | 37836 | 38498 |
| AFN37687.1 | JX042578_p90 | hypothetical protein | phrog_25281 | unknown function | unknown function | -1 | 49490 | 49624 |
| AFN37686.1 | JX042578_p89 | hypothetical protein | phrog_1445 | unknown function | unknown function | -1 | 49416 | 49493 |
| AFN37689.1 | JX042578_p92 | hypothetical protein | phrog_3471 | unknown function | unknown function | -1 | 49869 | 50120 |
| AFN37633.1 | JX042578_p17 | hypothetical protein | phrog_123 | tail terminator | connector | 1 | 12925 | 13332 |
| AFN37685.1 | JX042578_p88 | hypothetical protein | phrog_6340 | unknown function | unknown function | -1 | 48974 | 49384 |
| AFN37693.1 | JX042578_p36 | hypothetical protein | phrog_5282 | unknown function | unknown function | -1 | 27514 | 27798 |
| AFN37629.1 | JX042578_p13 | hypothetical protein | phrog_137 | head-tail adaptor Ad1 | connector | 1 | 11638 | 12012 |
| AFN37648.1 | JX042578_p35 | hypothetical protein | phrog_383 | unknown function | unknown function | -1 | 27078 | 27524 |
| AFN37644.1 | JX042578_p31 | hypothetical protein | phrog_733 | excisionase | integration and excision | 1 | 25651 | 26070 |
| AFN37626.1 | JX042578_p10 | capsid maturation protease | phrog_193 | head maturation protease | head and packaging | 1 | 9194 | 10033 |
| AFN37668.1 | JX042578_p65 | hypothetical protein | phrog_478 | site-specific recombination directionality factor RDF | integration and excision | -1 | 40509 | 40898 |
| AFN37674.1 | JX042578_p71 | hypothetical protein | phrog_642 | unknown function | unknown function | -1 | 42832 | 43134 |
| AFN37709.1 | JX042578_p56 | DNA primase | phrog_360 | DNA primase | DNA, RNA and nucleotide metabolism | -1 | 38308 | 38718 |
| AFN37631.1 | JX042578_p15 | hypothetical protein | phrog_320 | head closure Hc1 | connector | 1 | 12149 | 12511 |
| AFN37700.1 | JX042578_p59 | hypothetical protein | phrog_397 | unknown function | unknown function | -1 | 39201 | 39467 |
| AFN37678.1 | JX042578_p78 | hypothetical protein | phrog_6322 | unknown function | unknown function | -1 | 45848 | 46000 |
| AFN37637.1 | JX042578_p22 | minor tail protein | phrog_106 | minor tail protein | tail | 1 | 17966 | 18979 |
| AFN37704.1 | JX042578_p82 | hypothetical protein | phrog_1477 | unknown function | unknown function | -1 | 46748 | 46873 |
| AFN37677.1 | JX042578_p74 | immunity repressor | phrog_357 | transcriptional repressor | transcription regulation | -1 | 44253 | 44783 |
| AFN37690.1 | JX042578_p1 | HNH endonuclease | phrog_333 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 502 | 801 |
| AFN37664.1 | JX042578_p61 | hypothetical protein | phrog_4539 | unknown function | unknown function | -1 | 40019 | 40117 |
| AFN37632.1 | JX042578_p16 | hypothetical protein | phrog_321 | tail completion or Neck1 protein | connector | 1 | 12511 | 12924 |
| AFN37706.1 | JX042578_p75 | hypothetical protein | phrog_439 | site-specific recombination directionality factor RDF | integration and excision | -1 | 45047 | 45331 |
| AFN37702.1 | JX042578_p58 | hypothetical protein | phrog_15660 | unknown function | unknown function | -1 | 38968 | 39204 |
| AFN37712.1 | JX042578_p20 | tail assembly chaperone | phrog_330 | tail assembly chaperone | tail | 1 | 14288 | 14668 |
| AFN37623.1 | JX042578_p6 | lysin A | phrog_1512 | endolysin | lysis | 1 | 4242 | 5183 |
| AFN37698.1 | JX042578_p84 | ArdA | phrog_2059 | anti-restriction protein | moron, auxiliary metabolic gene and host takeover | -1 | 47027 | 47563 |
| AFN37682.1 | JX042578_p83 | hypothetical protein | phrog_2124 | unknown function | unknown function | -1 | 46870 | 47010 |
| AFN37634.1 | JX042578_p18 | major tail subunit | phrog_117 | major tail protein | tail | 1 | 13348 | 14178 |
| AFN37625.1 | JX042578_p9 | portal | phrog_104 | portal protein | head and packaging | 1 | 7764 | 9197 |
| AFN37676.1 | JX042578_p73 | hypothetical protein | phrog_5957 | unknown function | unknown function | -1 | 43950 | 44237 |
| AFN37705.1 | JX042578_p8 | hypothetical protein | phrog_9 | terminase large subunit | head and packaging | 1 | 5986 | 7764 |
| AFN37661.1 | JX042578_p53 | hypothetical protein | phrog_5242 | unknown function | unknown function | -1 | 37286 | 37555 |
| AFN37697.1 | JX042578_p77 | hypothetical protein | phrog_5066 | unknown function | unknown function | -1 | 45588 | 45851 |
| AFN37692.1 | JX042578_p28 | hypothetical protein | phrog_2235 | minor tail protein | tail | 1 | 23249 | 23578 |
| AFN37699.1 | JX042578_p85 | hypothetical protein | phrog_5927 | unknown function | unknown function | -1 | 47560 | 47844 |
| AFN37638.1 | JX042578_p23 | minor tail protein | phrog_110 | minor tail protein | tail | 1 | 18976 | 20775 |
| AFN37656.1 | JX042578_p47 | hypothetical protein | phrog_1454 | unknown function | unknown function | -1 | 34698 | 34934 |
| AFN37673.1 | JX042578_p70 | hypothetical protein | phrog_520 | unknown function | unknown function | -1 | 42603 | 42857 |
| AFN37639.1 | JX042578_p24 | hypothetical protein | phrog_352 | minor tail protein | tail | 1 | 20789 | 21253 |
| AFN37630.1 | JX042578_p14 | hypothetical protein | phrog_2348 | unknown function | unknown function | 1 | 12009 | 12152 |
| AFN37675.1 | JX042578_p72 | RecB-like exonuclease | phrog_69 | exonuclease | DNA, RNA and nucleotide metabolism | -1 | 43138 | 43953 |
| AFN37628.1 | JX042578_p12 | major capsid protein | phrog_10 | major head protein | head and packaging | 1 | 10628 | 11569 |
| AFN37679.1 | JX042578_p79 | hypothetical protein | phrog_5561 | unknown function | unknown function | -1 | 46013 | 46192 |
| AFN37710.1 | JX042578_p30 | integrase | phrog_95 | integrase | integration and excision | -1 | 23934 | 25415 |
| AFN37655.1 | JX042578_p46 | hypothetical protein | phrog_499 | unknown function | unknown function | -1 | 34528 | 34698 |
| AFN37683.1 | JX042578_p86 | hypothetical protein | phrog_3906 | unknown function | unknown function | -1 | 47891 | 48724 |
| AFN37642.1 | JX042578_p27 | minor tail protein | phrog_2683 | minor tail protein | tail | 1 | 21862 | 23244 |
| AFN37688.1 | JX042578_p91 | hypothetical protein | phrog_9783 | unknown function | unknown function | -1 | 49724 | 49810 |
| AFN37650.1 | JX042578_p39 | hypothetical protein | phrog_19744 | unknown function | unknown function | -1 | 30236 | 30352 |
| AFN37696.1 | JX042578_p44 | ribonucleotide reductase | phrog_367 | ribonucleotide reductase | DNA, RNA and nucleotide metabolism | -1 | 32295 | 34331 |
| AFN37621.1 | JX042578_p3 | hypothetical protein | phrog_1260 | minor tail protein | tail | 1 | 1395 | 2357 |
| AFN37708.1 | JX042578_p2 | hypothetical protein | phrog_226 | minor tail protein | tail | 1 | 839 | 1288 |
| AFN37654.1 | JX042578_p45 | hypothetical protein | phrog_1673 | unknown function | unknown function | -1 | 34328 | 34531 |
| AFN37658.1 | JX042578_p50 | phosphoesterase | phrog_221 | metallo-phosphoesterase | other | -1 | 35642 | 36412 |
| AFN37660.1 | JX042578_p52 | hypothetical protein | phrog_4195 | unknown function | unknown function | -1 | 36873 | 37289 |
| AFN37624.1 | JX042578_p7 | lysin B | phrog_102 | endolysin | lysis | 1 | 5180 | 5989 |
| AFN37681.1 | JX042578_p81 | hypothetical protein | phrog_6649 | unknown function | unknown function | -1 | 46533 | 46751 |
| AFN37672.1 | JX042578_p69 | hypothetical protein | phrog_18682 | unknown function | unknown function | -1 | 42424 | 42606 |
| AFN37663.1 | JX042578_p60 | endo VII | phrog_307 | endonuclease VII | DNA, RNA and nucleotide metabolism | -1 | 39565 | 40029 |
| AFN37640.1 | JX042578_p25 | hypothetical protein | phrog_981 | minor tail protein | tail | 1 | 21246 | 21548 |