Genomic map of Mycobacterium virus Macncheese (JX042579)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
JX042579
Definition
Mycobacterium virus MacnCheese, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Timquatrovirus.
DB of origin
PVOG
Length
61567
Host Name
Mycobacterium smegmatis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
99
%GC
67.28
Number of singletons
2
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
AFN37779.1 JX042579_p91 hypothetical protein phrog_4560 unknown function unknown function 1 57089 57346
AFN37743.1 JX042579_p52 hypothetical protein phrog_2654 unknown function unknown function 1 37944 38117
AFN37778.1 JX042579_p90 hypothetical protein phrog_2074 unknown function unknown function 1 56613 56876
AFN37736.1 JX042579_p42 queuine tRNA-ribosyltransferase phrog_1279 queuine tRNA-ribosyltransferase moron, auxiliary metabolic gene and host takeover 1 31958 32809
AFN37782.1 JX042579_p94 hypothetical protein phrog_15500 unknown function unknown function 1 57896 58729
AFN37734.1 JX042579_p40 hypothetical protein phrog_11692 unknown function unknown function 1 31432 31587
AFN37751.1 JX042579_p60 hypothetical protein phrog_2596 unknown function unknown function 1 41385 41663
AFN37790.1 JX042579_p43 hypothetical protein phrog_658 unknown function unknown function -1 32856 33155
AFN37718.1 JX042579_p23 minor tail protein phrog_110 minor tail protein tail 1 17821 19584
AFN37730.1 JX042579_p36 hypothetical protein phrog_284 exonuclease DNA, RNA and nucleotide metabolism 1 29261 30394
AFN37797.1 JX042579_p7 hypothetical protein phrog_1459 terminase small subunit head and packaging 1 1483 1710
AFN37780.1 JX042579_p92 hypothetical protein phrog_12202 unknown function unknown function 1 57346 57468
AFN37739.1 JX042579_p48 hypothetical protein phrog_20078 DNA binding protein DNA, RNA and nucleotide metabolism 1 36927 37046
AFN37811.1 JX042579_p70 glutaredoxin phrog_22 thioredoxin domain DNA, RNA and nucleotide metabolism 1 44725 44967
AFN37799.1 JX042579_p9 portal protein phrog_104 portal protein head and packaging 1 3139 4695
AFN37728.1 JX042579_p33 holin phrog_565 holin lysis 1 28230 28682
AFN37724.1 JX042579_p29 minor tail protein phrog_416 minor tail protein tail 1 24319 25308
AFN37770.1 JX042579_p82 hypothetical protein phrog_6045 unknown function unknown function 1 52664 53080
AFN37758.1 JX042579_p67 hypothetical protein phrog_542 unknown function unknown function 1 43739 43909
AFN37809.1 JX042579_p68 hypothetical protein phrog_2388 unknown function unknown function 1 43909 44025
AFN37714.1 JX042579_p20 tail assembly chaperone phrog_1861 unknown function unknown function 1 11578 12018
AFN37806.1 JX042579_p16 hypothetical protein phrog_387 neck protein connector 1 9932 10216
AFN37727.1 JX042579_p32 lysin B phrog_102 endolysin lysis 1 27431 28219
AFN37767.1 JX042579_p79 hypothetical protein phrog_7658 unknown function unknown function 1 51340 51573
AFN37753.1 JX042579_p62 hypothetical protein phrog_1674 exonuclease DNA, RNA and nucleotide metabolism 1 41974 42873
AFN37800.1 JX042579_p10 capsid maturation protease phrog_1752 head maturation protease head and packaging 1 4634 7237
AFN37762.1 JX042579_p74 hypothetical protein phrog_3478 unknown function unknown function 1 49002 49445
AFN37750.1 JX042579_p59 DnaQ-like protein phrog_192 DNA polymerase exonuclease subunit DNA, RNA and nucleotide metabolism 1 40831 41388
AFN37786.1 JX042579_p98 hypothetical protein phrog_15061 unknown function unknown function 1 60697 61212
AFN37798.1 JX042579_p8 terminase large subunit phrog_2 terminase large subunit head and packaging 1 1694 3127
AFN37772.1 JX042579_p84 hypothetical protein phrog_7731 unknown function unknown function 1 54056 54445
AFN37805.1 JX042579_p15 hypothetical protein phrog_763 head-tail adaptor connector 1 9598 9951
AFN37729.1 JX042579_p34 hypothetical protein phrog_3413 unknown function unknown function 1 28679 29026
AFN37796.1 JX042579_p6 hypothetical protein phrog_2622 unknown function unknown function 1 1298 1483
AFN37810.1 JX042579_p69 hypothetical protein phrog_1911 unknown function unknown function 1 44105 44629
AFN37784.1 JX042579_p96 hypothetical protein phrog_4095 unknown function unknown function 1 59356 60054
AFN37754.1 JX042579_p63 hypothetical protein phrog_3492 unknown function unknown function 1 42870 43046
AFN37748.1 JX042579_p57 hypothetical protein phrog_3186 unknown function unknown function 1 40122 40535
AFN37747.1 JX042579_p56 WhiB phrog_2781 unknown function unknown function 1 39191 40129
AFN37768.1 JX042579_p80 hypothetical protein phrog_5546 unknown function unknown function 1 51630 51839
AFN37749.1 JX042579_p58 hypothetical protein phrog_1956 unknown function unknown function 1 40525 40812
AFN37794.1 JX042579_p4 hypothetical protein phrog_14141 unknown function unknown function 1 643 783
AFN37716.1 JX042579_p21 tapemeasure protein phrog_971 endolysin lysis 1 12433 16590
AFN37783.1 JX042579_p95 hypothetical protein phrog_4631 unknown function unknown function 1 58839 59138
AFN37777.1 JX042579_p89 hypothetical protein phrog_15782 unknown function unknown function 1 56308 56616
AFN37789.1 JX042579_p46 hypothetical protein phrog_950 unknown function unknown function -1 35237 36148
AFN37774.1 JX042579_p86 hypothetical protein phrog_666 unknown function unknown function 1 54969 55178
AFN37745.1 JX042579_p54 hypothetical protein phrog_2286 unknown function unknown function 1 38254 38931
AFN37781.1 JX042579_p93 hypothetical protein phrog_20958 unknown function unknown function 1 57608 57784
AFN37752.1 JX042579_p61 hypothetical protein phrog_2870 unknown function unknown function 1 41660 41977
AFN37723.1 JX042579_p28 hypothetical protein phrog_3901 unknown function unknown function 1 24002 24319
AFN37776.1 JX042579_p88 hypothetical protein phrog_2493 unknown function unknown function 1 55739 56311
AFN37792.1 JX042579_p2 hypothetical protein phrog_2293 unknown function unknown function 1 194 415
AFN37803.1 JX042579_p13 major capsid protein phrog_10 major head protein head and packaging 1 8170 9093
AFN37766.1 JX042579_p78 hypothetical protein phrog_1338 unknown function unknown function 1 50941 51216
AFN37804.1 JX042579_p14 hypothetical protein phrog_137 head-tail adaptor Ad1 connector 1 9215 9598
AFN37731.1 JX042579_p37 hypothetical protein phrog_1042 unknown function unknown function 1 30394 30618
AFN37795.1 JX042579_p5 hypothetical protein phrog_19409 unknown function unknown function 1 867 1223
AFN37721.1 JX042579_p26 hypothetical protein phrog_1736 minor tail protein tail 1 21248 21556
AFN37713.1 JX042579_p18 major tail subunit phrog_117 major tail protein tail 1 10792 11403
AFN37788.1 JX042579_p47 immunity repressor phrog_1746 transcriptional repressor transcription regulation -1 36177 36557
AFN37740.1 JX042579_p49 HTH DNA binding domain protein phrog_66 excisionase and transcriptional regulator integration and excision 1 37043 37276
AFN37741.1 JX042579_p50 hypothetical protein phrog_2908 unknown function unknown function 1 37267 37638
AFN37808.1 JX042579_p35 hypothetical protein phrog_1738 unknown function unknown function 1 29023 29301
AFN37746.1 JX042579_p55 hypothetical protein phrog_472 WhiB transcriptional factor transcription regulation 1 38928 39194
AFN37744.1 JX042579_p53 hypothetical protein phrog_17160 unknown function unknown function 1 38114 38257
AFN37715.1 JX042579_p19 tail assembly chaperone phrog_1326 tail assembly chaperone tail 1 11578 12428
AFN37793.1 JX042579_p3 hypothetical protein singleton unknown function unknown function 1 412 585
AFN37738.1 JX042579_p45 hypothetical protein phrog_8155 unknown function unknown function 1 34843 35163
AFN37771.1 JX042579_p83 hypothetical protein phrog_2342 unknown function unknown function 1 53175 54059
AFN37769.1 JX042579_p81 SprT-like protein phrog_1006 unknown function unknown function 1 51963 52529
AFN37759.1 JX042579_p71 hypothetical protein phrog_1571 HNH endonuclease DNA, RNA and nucleotide metabolism 1 44967 45302
AFN37719.1 JX042579_p24 hypothetical protein phrog_1697 minor tail protein tail 1 19584 20096
AFN37791.1 JX042579_p1 hypothetical protein phrog_5391 unknown function unknown function 1 51 197
AFN37732.1 JX042579_p38 hypothetical protein singleton unknown function unknown function 1 30660 30839
AFN37757.1 JX042579_p66 hypothetical protein phrog_1581 unknown function unknown function 1 43527 43739
AFN37801.1 JX042579_p11 hypothetical protein phrog_1757 unknown function unknown function 1 7234 7437
AFN37735.1 JX042579_p41 hypothetical protein phrog_9364 unknown function unknown function 1 31639 31827
AFN37717.1 JX042579_p22 minor tail protein phrog_106 minor tail protein tail 1 16685 17821
AFN37763.1 JX042579_p75 hypothetical protein phrog_15207 unknown function unknown function 1 49442 49606
AFN37787.1 JX042579_p99 HNH endonuclease domain protein phrog_338 HNH endonuclease DNA, RNA and nucleotide metabolism 1 61214 61501
AFN37785.1 JX042579_p97 hypothetical protein phrog_747 unknown function unknown function 1 60456 60683
AFN37722.1 JX042579_p27 minor tail protein phrog_746 minor tail protein tail 1 21549 24002
AFN37725.1 JX042579_p30 hypothetical protein phrog_240 head protein head and packaging 1 25401 25757
AFN37733.1 JX042579_p39 hypothetical protein phrog_2311 HTH DNA binding protein DNA, RNA and nucleotide metabolism 1 31034 31432
AFN37755.1 JX042579_p64 hypothetical protein phrog_8427 unknown function unknown function 1 43048 43242
AFN37756.1 JX042579_p65 hypothetical protein phrog_5466 unknown function unknown function 1 43252 43530
AFN37807.1 JX042579_p17 hypothetical protein phrog_123 tail terminator connector 1 10213 10644
AFN37720.1 JX042579_p25 minor tail protein phrog_1565 minor tail protein tail 1 20145 21233
AFN37760.1 JX042579_p72 DNA primase phrog_2478 DNA polymerase/primase DNA, RNA and nucleotide metabolism 1 45341 47941
AFN37802.1 JX042579_p12 scaffolding protein phrog_1793 head scaffolding protein head and packaging 1 7513 8091
AFN37761.1 JX042579_p73 RusA-like protein phrog_3055 RusA-like Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 48347 49009
AFN37764.1 JX042579_p76 peptidase phrog_908 unknown function unknown function 1 49599 50501
AFN37737.1 JX042579_p44 integrase phrog_1 integrase integration and excision 1 33533 34810
AFN37742.1 JX042579_p51 hypothetical protein phrog_6733 unknown function unknown function 1 37711 37947
AFN37775.1 JX042579_p87 hypothetical protein phrog_2822 unknown function unknown function 1 55279 55746
AFN37773.1 JX042579_p85 hypothetical protein phrog_14052 unknown function unknown function 1 54442 54975
AFN37765.1 JX042579_p77 hypothetical protein phrog_549 unknown function unknown function 1 50498 50944
AFN37726.1 JX042579_p31 lysin A phrog_317 endolysin lysis 1 25776 27434