| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
JX262376 |
Definition |
Streptomyces phage phiELB20, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Arquatrovirinae; Arequatrovirus; Streptomyces virus ELB20. |
DB of origin |
PVOG |
Length |
51160 |
Host Name |
Streptomyces sp. |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
81 |
%GC |
66.98 |
Number of singletons |
1 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| AFO10897.1 | JX262376_p31 | Zn binding protein | phrog_3912 | unknown function | unknown function | 1 | 25968 | 26450 |
| AFO10895.1 | JX262376_p29 | lysis protein | phrog_20055 | unknown function | unknown function | 1 | 24348 | 24869 |
| AFO10933.1 | JX262376_p67 | hypothetical protein | phrog_9778 | unknown function | unknown function | -1 | 44061 | 44234 |
| AFO10899.1 | JX262376_p33 | deaminase | phrog_174 | dCMP deaminase | DNA, RNA and nucleotide metabolism | 1 | 27045 | 27530 |
| AFO10868.1 | JX262376_p2 | structural protein | phrog_333 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 804 | 974 |
| AFO10914.1 | JX262376_p48 | hypothetical protein | phrog_22999 | unknown function | unknown function | -1 | 35597 | 35704 |
| AFO10947.1 | JX262376_p81 | hypothetical protein | phrog_23917 | unknown function | unknown function | -1 | 49957 | 50160 |
| AFO10912.1 | JX262376_p46 | hypothetical protein | phrog_4123 | unknown function | unknown function | 1 | 32925 | 33302 |
| AFO10925.1 | JX262376_p59 | hypothetical protein | phrog_1997 | unknown function | unknown function | -1 | 41411 | 41605 |
| AFO10891.1 | JX262376_p25 | hypothetical protein | phrog_1493 | endolysin | lysis | 1 | 21866 | 22936 |
| AFO10922.1 | JX262376_p56 | hypothetical protein | phrog_11485 | unknown function | unknown function | -1 | 40217 | 40708 |
| AFO10877.1 | JX262376_p11 | hypothetical protein | phrog_320 | head closure Hc1 | connector | 1 | 8708 | 9049 |
| AFO10915.1 | JX262376_p49 | hypothetical protein | phrog_10944 | unknown function | unknown function | -1 | 35701 | 35943 |
| AFO10920.1 | JX262376_p54 | flavin-dependent thymidylate synthase | phrog_85 | thymidylate synthase | DNA, RNA and nucleotide metabolism | -1 | 39249 | 39956 |
| AFO10905.1 | JX262376_p39 | hypothetical protein | phrog_4022 | unknown function | unknown function | 1 | 30032 | 30394 |
| AFO10938.1 | JX262376_p72 | hypothetical protein | phrog_4275 | unknown function | unknown function | -1 | 46134 | 46277 |
| AFO10880.1 | JX262376_p14 | tail protein | phrog_117 | major tail protein | tail | 1 | 10026 | 10766 |
| AFO10946.1 | JX262376_p80 | hypothetical protein | phrog_11579 | unknown function | unknown function | -1 | 49568 | 49960 |
| AFO10913.1 | JX262376_p47 | ribonucleoside-triphosphate reductase | phrog_367 | ribonucleotide reductase | DNA, RNA and nucleotide metabolism | 1 | 33380 | 35494 |
| AFO10901.1 | JX262376_p35 | hypothetical protein | phrog_244 | RusA-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 28408 | 28785 |
| AFO10883.1 | JX262376_p17 | tapemeasure protein | phrog_305 | tail length tape measure protein | tail | 1 | 11627 | 15028 |
| AFO10930.1 | JX262376_p64 | hypothetical protein | phrog_5209 | unknown function | unknown function | -1 | 43080 | 43394 |
| AFO10924.1 | JX262376_p58 | hypothetical protein | phrog_3965 | unknown function | unknown function | -1 | 40917 | 41414 |
| AFO10928.1 | JX262376_p62 | deoxynucleotide monophosphate kinase | phrog_139 | deoxynucleoside monophosphate kinase | other | -1 | 42300 | 42887 |
| AFO10885.1 | JX262376_p19 | tail protease | phrog_538 | minor tail protein | tail | 1 | 15893 | 17104 |
| AFO10937.1 | JX262376_p71 | hypothetical protein | phrog_2355 | unknown function | unknown function | -1 | 45692 | 46105 |
| AFO10932.1 | JX262376_p66 | hypothetical protein | phrog_13837 | unknown function | unknown function | -1 | 43636 | 43968 |
| AFO10904.1 | JX262376_p38 | hypothetical protein | phrog_849 | DNA primase | DNA, RNA and nucleotide metabolism | 1 | 29365 | 30027 |
| AFO10944.1 | JX262376_p78 | hypothetical protein | phrog_31224 | unknown function | unknown function | -1 | 49057 | 49284 |
| AFO10917.1 | JX262376_p51 | DNA-binding protein | phrog_5823 | transcriptional regulator | transcription regulation | -1 | 36266 | 37357 |
| AFO10929.1 | JX262376_p63 | hypothetical protein | phrog_25829 | unknown function | unknown function | -1 | 42884 | 43087 |
| AFO10874.1 | JX262376_p8 | hypothetical protein | phrog_233 | head scaffolding protein | head and packaging | 1 | 6466 | 6990 |
| AFO10911.1 | JX262376_p45 | hypothetical protein | phrog_3512 | sigma factor | transcription regulation | 1 | 32542 | 32928 |
| AFO10907.1 | JX262376_p41 | hypothetical protein | phrog_24938 | unknown function | unknown function | 1 | 30604 | 30792 |
| AFO10945.1 | JX262376_p79 | hypothetical protein | phrog_4485 | unknown function | unknown function | -1 | 49281 | 49457 |
| AFO10890.1 | JX262376_p24 | hypothetical protein | phrog_3534 | unknown function | unknown function | 1 | 21476 | 21796 |
| AFO10903.1 | JX262376_p37 | DNA replication protein | phrog_360 | DNA primase | DNA, RNA and nucleotide metabolism | 1 | 28907 | 29350 |
| AFO10908.1 | JX262376_p42 | hypothetical protein | phrog_3979 | unknown function | unknown function | 1 | 30794 | 31018 |
| AFO10881.1 | JX262376_p15 | tail assembly chaperone | phrog_330 | tail assembly chaperone | tail | 1 | 10890 | 11231 |
| AFO10931.1 | JX262376_p65 | hypothetical protein | phrog_3991 | unknown function | unknown function | -1 | 43394 | 43636 |
| AFO10873.1 | JX262376_p7 | hypothetical protein | phrog_193 | head maturation protease | head and packaging | 1 | 5354 | 6463 |
| AFO10910.1 | JX262376_p44 | integrase/recombinase | phrog_1340 | unknown function | unknown function | 1 | 32192 | 32545 |
| AFO10876.1 | JX262376_p10 | hypothetical protein | phrog_137 | head-tail adaptor Ad1 | connector | 1 | 8214 | 8711 |
| AFO10939.1 | JX262376_p73 | hypothetical protein | phrog_16954 | unknown function | unknown function | -1 | 46359 | 46892 |
| AFO10879.1 | JX262376_p13 | hypothetical protein | phrog_123 | tail terminator | connector | 1 | 9516 | 10013 |
| AFO10869.1 | JX262376_p3 | hypothetical protein | phrog_3555 | unknown function | unknown function | 1 | 1370 | 1630 |
| AFO10909.1 | JX262376_p43 | hypothetical protein | phrog_284 | exonuclease | DNA, RNA and nucleotide metabolism | 1 | 31002 | 32195 |
| AFO10872.1 | JX262376_p6 | hypothetical protein | phrog_104 | portal protein | head and packaging | 1 | 3885 | 5357 |
| AFO10927.1 | JX262376_p61 | hypothetical protein | phrog_4024 | unknown function | unknown function | -1 | 42098 | 42298 |
| AFO10921.1 | JX262376_p55 | hypothetical protein | phrog_4071 | unknown function | unknown function | -1 | 39953 | 40216 |
| AFO10884.1 | JX262376_p18 | tail protein | phrog_33 | distal tail protein Dit | tail | 1 | 15035 | 15892 |
| AFO10940.1 | JX262376_p74 | hypothetical protein | phrog_4313 | unknown function | unknown function | -1 | 47014 | 47862 |
| AFO10878.1 | JX262376_p12 | hypothetical protein | phrog_321 | tail completion or Neck1 protein | connector | 1 | 9049 | 9516 |
| AFO10867.1 | JX262376_p1 | hypothetical protein | phrog_4207 | unknown function | unknown function | -1 | 35 | 220 |
| AFO10902.1 | JX262376_p36 | hypothetical protein | phrog_4673 | unknown function | unknown function | 1 | 28782 | 28919 |
| AFO10888.1 | JX262376_p22 | hypothetical protein | phrog_4817 | unknown function | unknown function | 1 | 19637 | 20107 |
| AFO10894.1 | JX262376_p28 | repressor | phrog_3929 | transcriptional repressor | transcription regulation | 1 | 23634 | 24092 |
| AFO10889.1 | JX262376_p23 | chaperone of endosialidase | phrog_988 | tail protein | tail | 1 | 20139 | 21416 |
| AFO10941.1 | JX262376_p75 | hypothetical protein | phrog_12223 | unknown function | unknown function | -1 | 48111 | 48242 |
| AFO10893.1 | JX262376_p27 | hypothetical protein | phrog_4061 | unknown function | unknown function | -1 | 23210 | 23518 |
| AFO10923.1 | JX262376_p57 | hypothetical protein | phrog_3424 | unknown function | unknown function | -1 | 40693 | 40920 |
| AFO10916.1 | JX262376_p50 | hypothetical protein | phrog_15135 | unknown function | unknown function | -1 | 35940 | 36188 |
| AFO10892.1 | JX262376_p26 | lysis protein | singleton | unknown function | unknown function | 1 | 22980 | 23153 |
| AFO10898.1 | JX262376_p32 | DNA replication protein | phrog_1288 | unknown function | unknown function | 1 | 26533 | 26970 |
| AFO10934.1 | JX262376_p68 | hypothetical protein | phrog_3994 | unknown function | unknown function | -1 | 44234 | 44653 |
| AFO10943.1 | JX262376_p77 | hypothetical protein | phrog_2563 | unknown function | unknown function | -1 | 48566 | 49000 |
| AFO10926.1 | JX262376_p60 | hypothetical protein | phrog_20471 | unknown function | unknown function | -1 | 41697 | 42101 |
| AFO10896.1 | JX262376_p30 | hypothetical protein | phrog_466 | exonuclease | DNA, RNA and nucleotide metabolism | 1 | 24870 | 25844 |
| AFO10935.1 | JX262376_p69 | hypothetical protein | phrog_3908 | unknown function | unknown function | -1 | 44912 | 45139 |
| AFO10887.1 | JX262376_p21 | tail fiber protein | phrog_4013 | unknown function | unknown function | 1 | 17412 | 19601 |
| AFO10882.1 | JX262376_p16 | tail assembly chaperone | phrog_5813 | tail assembly chaperone | tail | 1 | 11288 | 11623 |
| AFO10906.1 | JX262376_p40 | hypothetical protein | phrog_10412 | unknown function | unknown function | 1 | 30391 | 30603 |
| AFO10919.1 | JX262376_p53 | hypothetical protein | phrog_9533 | unknown function | unknown function | -1 | 39052 | 39252 |
| AFO10871.1 | JX262376_p5 | terminase protein | phrog_9 | terminase large subunit | head and packaging | 1 | 2194 | 3855 |
| AFO10918.1 | JX262376_p52 | recombinase | phrog_95 | integrase | integration and excision | 1 | 37707 | 38996 |
| AFO10936.1 | JX262376_p70 | hypothetical protein | phrog_4239 | unknown function | unknown function | -1 | 45142 | 45570 |
| AFO10870.1 | JX262376_p4 | hypothetical protein | phrog_226 | minor tail protein | tail | 1 | 1845 | 2180 |
| AFO10942.1 | JX262376_p76 | hypothetical protein | phrog_20423 | unknown function | unknown function | -1 | 48315 | 48503 |
| AFO10886.1 | JX262376_p20 | hypothetical protein | phrog_1276 | unknown function | unknown function | 1 | 17109 | 17411 |
| AFO10875.1 | JX262376_p9 | capsid protein | phrog_283 | major head protein | head and packaging | 1 | 7068 | 8135 |
| AFO10900.1 | JX262376_p34 | DNA helicase | phrog_243 | DnaB-like replicative helicase | DNA, RNA and nucleotide metabolism | 1 | 27587 | 28342 |