Genomic map of Salmonella phage vB_SenS_AG11 (JX297445)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
JX297445
Definition
Salmonella phage vB_SenS_AG11, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Guernseyvirinae; Jerseyvirus; Salmonella virus AG11.
DB of origin
PVOG
Length
41546
Host Name
Salmonella enterica
Host domain
Bacteria
Is prophage?
undef
Number of proteins
66
%GC
49.9
Number of singletons
4
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
AFO12459.1 JX297445_p59 lysozyme phrog_7 endolysin lysis 1 39433 39915
AFO12421.1 JX297445_p21 hypothetical protein phrog_2452 unknown function unknown function -1 12719 12949
AFO12443.1 JX297445_p43 DNA-binding protein phrog_3 transcriptional repressor transcription regulation 1 32302 32520
AFO12411.1 JX297445_p11 major capsid protein phrog_247 major head protein head and packaging 1 7285 8334
AFO12453.1 JX297445_p53 hypothetical protein phrog_3766 unknown function unknown function 1 37260 37463
AFO12426.1 JX297445_p26 tail tape measure protein phrog_1538 tail length tape measure protein tail 1 15417 17726
AFO12416.1 JX297445_p16 hypothetical protein phrog_3614 unknown function unknown function 1 9782 10351
AFO12439.1 JX297445_p39 hypothetical protein phrog_13603 unknown function unknown function -1 29843 30019
AFO12420.1 JX297445_p20 tail protein phrog_290 minor tail protein tail 1 11521 12690
AFO12402.1 JX297445_p2 terminase large subunit phrog_2 terminase large subunit head and packaging 1 536 1807
AFO12429.1 JX297445_p29 hypothetical protein phrog_329 minor tail protein tail 1 18737 19102
AFO12427.1 JX297445_p27 hypothetical protein phrog_384 virion structural protein head and packaging 1 17728 18228
AFO12428.1 JX297445_p28 hypothetical protein phrog_396 minor tail protein tail 1 18225 18740
AFO12458.1 JX297445_p58 HNH endonuclease phrog_99 HNH endonuclease DNA, RNA and nucleotide metabolism 1 38901 39446
AFO12446.1 JX297445_p46 hypothetical protein phrog_5169 unknown function unknown function -1 35064 35297
AFO12460.1 JX297445_p60 hypothetical protein singleton unknown function unknown function 1 39926 40045
AFO12424.1 JX297445_p24 hypothetical protein phrog_313 Tail assembly chaperone tail 1 14646 15062
AFO12405.1 JX297445_p5 head protein phrog_241 head morphogenesis head and packaging 1 4178 5221
AFO12437.1 JX297445_p37 DNA polymerase phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism -1 25979 29077
AFO12403.1 JX297445_p3 portal protein phrog_145 portal protein head and packaging 1 1820 3289
AFO12415.1 JX297445_p15 hypothetical protein phrog_477 head-tail adaptor Ad1 connector 1 9270 9779
AFO12464.1 JX297445_p64 NinH protein phrog_268 unknown function unknown function 1 40682 40906
AFO12434.1 JX297445_p34 hypothetical protein phrog_4879 unknown function unknown function -1 25382 25573
AFO12441.1 JX297445_p41 hypothetical protein phrog_1997 unknown function unknown function -1 31440 31604
AFO12452.1 JX297445_p52 hypothetical protein phrog_9384 unknown function unknown function 1 37035 37199
AFO12410.1 JX297445_p10 hypothetical protein phrog_206 head scaffolding protein head and packaging 1 6574 7281
AFO12445.1 JX297445_p45 helicase-primase phrog_3228 replicative helicase-primase DNA, RNA and nucleotide metabolism -1 32821 35007
AFO12430.1 JX297445_p30 tail protein phrog_469 tail protein tail 1 19093 21651
AFO12454.1 JX297445_p54 hypothetical protein phrog_4947 unknown function unknown function 1 37460 37831
AFO12422.1 JX297445_p22 hypothetical protein phrog_704 DNA repair exonuclease DNA, RNA and nucleotide metabolism -1 12946 14076
AFO12409.1 JX297445_p9 hypothetical protein phrog_1267 Rz-like spanin lysis 1 6232 6495
AFO12455.1 JX297445_p55 hypothetical protein phrog_1040 peptidase HslV family other 1 37837 38271
AFO12408.1 JX297445_p8 hypothetical protein phrog_2536 Rz-like spanin lysis 1 6000 6386
AFO12438.1 JX297445_p38 hypothetical protein phrog_112 Gp2.5-like ssDNA binding protein and ssDNA annealing protein DNA, RNA and nucleotide metabolism -1 29135 29761
AFO12451.1 JX297445_p51 hypothetical protein singleton unknown function unknown function 1 36897 37013
AFO12463.1 JX297445_p63 hypothetical protein phrog_1402 unknown function unknown function 1 40506 40685
AFO12444.1 JX297445_p44 hypothetical protein singleton unknown function unknown function -1 32533 32685
AFO12448.1 JX297445_p48 hypothetical protein singleton unknown function unknown function 1 36085 36264
AFO12433.1 JX297445_p33 DNA helicase phrog_62 DNA helicase DNA, RNA and nucleotide metabolism -1 23961 25385
AFO12462.1 JX297445_p62 hypothetical protein phrog_4684 unknown function unknown function 1 40319 40483
AFO12417.1 JX297445_p17 hypothetical protein phrog_161 head closure Hc1 connector 1 10351 10710
AFO12404.1 JX297445_p4 hypothetical protein phrog_6095 amidase lysis -1 3320 3973
AFO12401.1 JX297445_p1 terminase small subunit phrog_3064 terminase head and packaging 1 1 546
AFO12431.1 JX297445_p31 tailspike protein phrog_1819 tail spike protein tail 1 21664 23718
AFO12442.1 JX297445_p42 hypothetical protein phrog_3127 unknown function unknown function -1 31647 32168
AFO12457.1 JX297445_p57 holin-like class I phrog_2508 holin lysis 1 38633 38923
AFO12466.1 JX297445_p66 hypothetical protein phrog_10134 unknown function unknown function 1 41222 41452
AFO12449.1 JX297445_p49 hypothetical protein phrog_625 unknown function unknown function 1 36280 36555
AFO12413.1 JX297445_p13 tail protein phrog_4069 Hoc-like head decoration head and packaging 1 8691 9041
AFO12436.1 JX297445_p36 hypothetical protein phrog_38225 unknown function unknown function -1 25879 25989
AFO12432.1 JX297445_p32 hypothetical protein phrog_5915 unknown function unknown function -1 23803 23964
AFO12450.1 JX297445_p50 EaA protein phrog_924 unknown function unknown function 1 36552 36746
AFO12447.1 JX297445_p47 DNA-binding protein phrog_66 excisionase and transcriptional regulator integration and excision -1 35294 35464
AFO12425.1 JX297445_p25 hypothetical protein phrog_4557 unknown function unknown function 1 15068 15424
AFO12412.1 JX297445_p12 hypothetical protein phrog_4366 head fiber protein head and packaging 1 8395 8679
AFO12435.1 JX297445_p35 hypothetical protein phrog_93 endonuclease DNA, RNA and nucleotide metabolism -1 25605 25892
AFO12423.1 JX297445_p23 hypothetical protein phrog_14165 unknown function unknown function -1 14139 14468
AFO12440.1 JX297445_p40 hypothetical protein phrog_69 exonuclease DNA, RNA and nucleotide metabolism -1 30019 31443
AFO12414.1 JX297445_p14 hypothetical protein phrog_4451 unknown function unknown function 1 9078 9266
AFO12456.1 JX297445_p56 hypothetical protein phrog_2359 holin lysis 1 38350 38631
AFO12465.1 JX297445_p65 hypothetical protein phrog_2531 unknown function unknown function 1 40906 41205
AFO12407.1 JX297445_p7 hypothetical protein phrog_14923 unknown function unknown function 1 5764 5955
AFO12406.1 JX297445_p6 tail protein phrog_3945 Hoc-like head decoration head and packaging 1 5224 5682
AFO12418.1 JX297445_p18 hypothetical protein phrog_169 tail completion or Neck1 protein connector 1 10707 11102
AFO12419.1 JX297445_p19 hypothetical protein phrog_179 tail terminator connector 1 11102 11521
AFO12461.1 JX297445_p61 hypothetical protein phrog_2180 unknown function unknown function 1 40100 40318