Genomic map of Mycobacterium virus Marcell (JX307705)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
JX307705
Definition
Mycobacterium phage Marcell, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Fromanvirus.
DB of origin
PVOG
Length
49186
Host Name
Mycobacterium smegmatis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
83
%GC
63.97
Number of singletons
0
Number of paralogs
2

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
AFU20774.1 JX307705_p68 immunity repressor phrog_357 transcriptional repressor transcription regulation -1 43476 43988
AFU20762.1 JX307705_p56 EndoVII phrog_307 endonuclease VII DNA, RNA and nucleotide metabolism -1 38963 39439
AFU20780.1 JX307705_p75 hypothetical protein phrog_2093 unknown function unknown function -1 45486 45638
AFU20755.1 JX307705_p47 hypothetical protein phrog_354 sigma-K factor transcription regulation -1 35396 36187
AFU20754.1 JX307705_p46 hypothetical protein phrog_499 unknown function unknown function -1 35217 35399
AFU20741.1 JX307705_p30 minor tail protein phrog_1397 unknown function unknown function 1 23952 24299
AFU20723.1 JX307705_p10 lysin B phrog_102 endolysin lysis 1 5946 6914
AFU20733.1 JX307705_p20 hypothetical protein phrog_123 tail terminator connector 1 14347 14793
AFU20736.1 JX307705_p25 minor tail protein phrog_106 minor tail protein tail 1 19089 21146
AFU20779.1 JX307705_p74 hypothetical protein phrog_861 site-specific recombination directionality factor RDF integration and excision -1 45322 45489
AFU20766.1 JX307705_p60 DnaB-like helicase phrog_243 DnaB-like replicative helicase DNA, RNA and nucleotide metabolism -1 40134 40943
AFU20743.1 JX307705_p32 D-Ala-D-Ala carboxypeptidase phrog_382 minor tail protein with lysin activity tail 1 26170 27648
AFU20777.1 JX307705_p72 hypothetical protein phrog_1155 unknown function unknown function -1 45012 45137
AFU20747.1 JX307705_p39 hypothetical protein phrog_2035 unknown function unknown function -1 31682 31852
AFU20742.1 JX307705_p31 minor tail protein phrog_346 minor tail protein tail 1 24324 26177
AFU20726.1 JX307705_p13 capsid maturation protease phrog_193 head maturation protease head and packaging 1 10058 10939
AFU20794.1 JX307705_p37 integrase phrog_95 integrase integration and excision 1 29790 31292
AFU20758.1 JX307705_p51 hypothetical protein phrog_1167 phosphofructokinase other -1 37265 37819
AFU20719.1 JX307705_p5 structural protein phrog_1197 tail protein tail 1 2194 3264
AFU20763.1 JX307705_p57 hypothetical protein phrog_1019 unknown function unknown function -1 39426 39512
AFU20718.1 JX307705_p4 hypothetical protein phrog_2830 unknown function unknown function 1 1622 1933
AFU20798.1 JX307705_p22 tail assembly chaperone phrog_393 tail assembly chaperone tail 1 15675 16573
AFU20783.1 JX307705_p78 hypothetical protein phrog_3414 unknown function unknown function -1 46830 47114
AFU20757.1 JX307705_p50 hypothetical protein phrog_1503 unknown function unknown function -1 37089 37268
AFU20730.1 JX307705_p17 hypothetical protein phrog_137 head-tail adaptor Ad1 connector 1 13137 13586
AFU20796.1 JX307705_p70 hypothetical protein phrog_1720 unknown function unknown function -1 44546 44815
AFU20732.1 JX307705_p19 hypothetical protein phrog_321 tail completion or Neck1 protein connector 1 13948 14343
AFU20734.1 JX307705_p21 major tail subunit phrog_117 major tail protein tail 1 14802 15653
AFU20737.1 JX307705_p26 minor tail protein phrog_1543 minor tail protein tail 1 21143 21325
AFU20748.1 JX307705_p40 hypothetical protein phrog_1860 unknown function unknown function -1 31849 31944
AFU20735.1 JX307705_p24 tapemeasure protein phrog_305 tail length tape measure protein tail 1 16585 19065
AFU20751.1 JX307705_p43 DNA polymerase I phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism -1 32605 34431
AFU20724.1 JX307705_p11 terminase phrog_9 terminase large subunit head and packaging 1 6934 8622
AFU20727.1 JX307705_p14 scaffolding protein phrog_233 head scaffolding protein head and packaging 1 10998 11510
AFU20769.1 JX307705_p63 hypothetical protein phrog_2184 unknown function unknown function -1 41363 41686
AFU20752.1 JX307705_p44 hypothetical protein phrog_1781 unknown function unknown function -1 34468 34698
AFU20716.1 JX307705_p2 hypothetical protein phrog_333 HNH endonuclease DNA, RNA and nucleotide metabolism 1 743 1039
AFU20717.1 JX307705_p3 hypothetical protein phrog_226 minor tail protein tail 1 1074 1508
AFU20781.1 JX307705_p76 hypothetical protein phrog_932 unknown function unknown function -1 45635 45787
AFU20775.1 JX307705_p69 hypothetical protein phrog_439 site-specific recombination directionality factor RDF integration and excision -1 44250 44549
AFU20740.1 JX307705_p29 minor tail protein phrog_981 minor tail protein tail 1 23608 23955
AFU20792.1 JX307705_p33 hypothetical protein phrog_644 unknown function unknown function 1 27741 28061
AFU20722.1 JX307705_p9 lysin A phrog_317 endolysin lysis 1 4523 5956
AFU20786.1 JX307705_p81 hypothetical protein phrog_5542 unknown function unknown function -1 48034 48393
AFU20731.1 JX307705_p18 hypothetical protein phrog_320 head closure Hc1 connector 1 13586 13948
AFU20739.1 JX307705_p28 minor tail protein phrog_352 minor tail protein tail 1 23165 23611
AFU20770.1 JX307705_p64 hypothetical protein phrog_1763 HTH DNA binding protein DNA, RNA and nucleotide metabolism -1 41690 41872
AFU20765.1 JX307705_p59 hypothetical protein phrog_1941 unknown function unknown function -1 39784 40110
AFU20797.1 JX307705_p53 DNA primase phrog_360 DNA primase DNA, RNA and nucleotide metabolism -1 38183 38698
AFU20729.1 JX307705_p16 hypothetical protein phrog_1857 head-tail connector protein connector 1 12619 13137
AFU20787.1 JX307705_p82 hypothetical protein phrog_2212 unknown function unknown function -1 48390 48491
AFU20768.1 JX307705_p62 hypothetical protein phrog_520 unknown function unknown function -1 41073 41366
AFU20761.1 JX307705_p55 hypothetical protein phrog_397 unknown function unknown function -1 38832 38966
AFU20728.1 JX307705_p15 major capsid protein phrog_10 major head protein head and packaging 1 11521 12540
AFU20750.1 JX307705_p42 hypothetical protein phrog_383 unknown function unknown function -1 32225 32584
AFU20784.1 JX307705_p79 hypothetical protein phrog_2985 unknown function unknown function -1 47413 47568
AFU20772.1 JX307705_p66 hypothetical protein phrog_1584 unknown function unknown function -1 42716 43042
AFU20753.1 JX307705_p45 hypothetical protein phrog_364 ribonucleoside reductase class II DNA, RNA and nucleotide metabolism -1 34729 35220
AFU20725.1 JX307705_p12 portal protein phrog_104 portal protein head and packaging 1 8619 10061
AFU20738.1 JX307705_p27 minor tail protein phrog_110 minor tail protein tail 1 21325 23127
AFU20744.1 JX307705_p34 hypothetical protein phrog_1560 unknown function unknown function 1 28071 28262
AFU20788.1 JX307705_p83 hypothetical protein phrog_828 unknown function unknown function -1 48586 48789
AFU20764.1 JX307705_p58 hypothetical protein phrog_22 thioredoxin domain DNA, RNA and nucleotide metabolism -1 39509 39784
AFU20782.1 JX307705_p77 DNA methylase phrog_363 DNA methyltransferase other -1 46087 46764
AFU20771.1 JX307705_p65 RecB-like protein phrog_69 exonuclease DNA, RNA and nucleotide metabolism -1 41899 42723
AFU20773.1 JX307705_p67 hypothetical protein phrog_1809 unknown function unknown function -1 43039 43434
AFU20791.1 JX307705_p23 tail assembly chaperone phrog_330 tail assembly chaperone tail 1 15675 16151
AFU20720.1 JX307705_p7 hypothetical protein phrog_1718 tail protein tail 1 3998 4258
AFU20759.1 JX307705_p52 DNA primase phrog_47 DNA primase DNA, RNA and nucleotide metabolism -1 37816 38337
AFU20756.1 JX307705_p48 hypothetical protein phrog_1782 site-specific recombination directionality factor RDF integration and excision -1 36180 36320
AFU20745.1 JX307705_p36 hypothetical protein phrog_411 unknown function unknown function 1 29341 29637
AFU20767.1 JX307705_p61 hypothetical protein phrog_1705 unknown function unknown function -1 40930 41076
AFU20789.1 JX307705_p1 hypothetical protein phrog_31705 unknown function unknown function 1 615 743
AFU20749.1 JX307705_p41 hypothetical protein phrog_1971 unknown function unknown function -1 31941 32228
AFU20760.1 JX307705_p54 hypothetical protein phrog_1783 unknown function unknown function -1 38677 38835
AFU20790.1 JX307705_p6 hypothetical protein phrog_553 minor tail protein tail 1 3274 3984
AFU20776.1 JX307705_p71 hypothetical protein phrog_1387 unknown function unknown function -1 44812 45015
AFU20778.1 JX307705_p73 hypothetical protein phrog_1155 unknown function unknown function -1 45134 45322
AFU20785.1 JX307705_p80 hypothetical protein phrog_1387 unknown function unknown function -1 47846 48034
AFU20793.1 JX307705_p35 hypothetical protein phrog_754 minor tail protein tail 1 28259 29206
AFU20795.1 JX307705_p49 hypothetical protein phrog_221 metallo-phosphoesterase other -1 36325 37092
AFU20746.1 JX307705_p38 hypothetical protein phrog_1966 unknown function unknown function -1 31413 31685
AFU20721.1 JX307705_p8 hypothetical protein phrog_747 unknown function unknown function 1 4266 4523