Genomic map of Streptococcus phage JX01 (JX409895)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
JX409895
Definition
Streptococcus phage JX01, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae.
DB of origin
PVOG
Length
43028
Host Name
Streptococcus agalactiae
Host domain
Bacteria
Is prophage?
undef
Number of proteins
70
%GC
36.8
Number of singletons
4
Number of paralogs
1

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
AFQ95984.1 JX409895_p61 hypothetical protein phrog_12526 unknown function unknown function -1 36071 36232
AFQ96028.1 JX409895_p36 repressor protein phrog_4 transcriptional repressor transcription regulation 1 14601 15350
AFQ96042.1 JX409895_p69 phage terminase small subunit phrog_83 terminase small subunit head and packaging -1 41705 42172
AFQ95982.1 JX409895_p45 hypothetical protein phrog_16966 unknown function unknown function -1 20922 21038
AFQ96002.1 JX409895_p25 hypothetical protein phrog_5281 unknown function unknown function -1 10941 11165
AFQ96019.1 JX409895_p70 phage HNH endonuclease phrog_589 HNH endonuclease DNA, RNA and nucleotide metabolism -1 42345 42680
AFQ96010.1 JX409895_p37 hypothetical protein phrog_1412 antitoxin mazE-like moron, auxiliary metabolic gene and host takeover 1 15400 16149
AFQ96025.1 JX409895_p19 hypothetical protein phrog_378 single strand DNA binding protein DNA, RNA and nucleotide metabolism -1 7662 8120
AFQ96022.1 JX409895_p15 hypothetical protein phrog_93 endonuclease DNA, RNA and nucleotide metabolism -1 4814 5131
AFQ95980.1 JX409895_p6 hypothetical protein phrog_2397 unknown function unknown function -1 2184 2429
AFQ96038.1 JX409895_p62 major capsid protein phrog_10 major head protein head and packaging -1 36246 37421
AFQ96001.1 JX409895_p23 hypothetical protein phrog_5987 unknown function unknown function -1 10432 10632
AFQ95999.1 JX409895_p17 DNA primase phrog_12939 DNA primase DNA, RNA and nucleotide metabolism -1 6359 6856
AFQ96005.1 JX409895_p28 hypothetical protein phrog_37088 unknown function unknown function 1 11866 12078
AFQ95977.1 JX409895_p1 hypothetical protein phrog_38755 unknown function unknown function -1 398 610
AFQ95990.1 JX409895_p58 hypothetical protein phrog_5 tail completion or Neck1 protein connector -1 35048 35425
AFQ95998.1 JX409895_p12 hypothetical protein phrog_98 unknown function unknown function -1 3896 4300
AFQ96029.1 JX409895_p44 lysin phrog_291 endolysin lysis -1 19590 20921
AFQ96007.1 JX409895_p30 hypothetical protein phrog_633 transcriptional regulator transcription regulation -1 12305 12637
AFQ96040.1 JX409895_p64 portal protein phrog_12 portal protein head and packaging -1 38099 39304
AFQ96016.1 JX409895_p55 hypothetical protein phrog_187 head-tail adaptor connector -1 33608 33928
AFQ95996.1 JX409895_p10 hypothetical protein phrog_1027 unknown function unknown function -1 3457 3687
AFQ96024.1 JX409895_p18 DNA primase/polymerase N-termial domain protein phrog_695 DNA polymerase/primase DNA, RNA and nucleotide metabolism -1 6846 7658
AFQ96035.1 JX409895_p53 phage tape measure protein phrog_1293 tail length tape measure protein tail -1 29457 33398
AFQ96018.1 JX409895_p59 head-tail adaptor protein phrog_25 head closure Hc1 connector -1 35422 35754
AFQ96013.1 JX409895_p41 CsbD-like family phrog_4133 unknown function unknown function -1 17956 18156
AFQ96027.1 JX409895_p21 hypothetical protein phrog_124 Sak4-like ssDNA annealing protein DNA, RNA and nucleotide metabolism -1 9467 10159
AFQ95986.1 JX409895_p31 XRE family transcriptional regulator phrog_3 transcriptional repressor transcription regulation -1 12672 12887
AFQ95995.1 JX409895_p7 hypothetical protein phrog_2275 unknown function unknown function -1 2420 2737
AFQ96015.1 JX409895_p48 hypothetical protein phrog_1567 unknown function unknown function -1 21609 21821
AFQ96006.1 JX409895_p29 hypothetical protein singleton unknown function unknown function 1 12075 12200
AFQ95985.1 JX409895_p24 transcriptional regulator, Cro/CI family phrog_8 transcriptional regulator transcription regulation -1 10625 10975
AFQ95992.1 JX409895_p9 hypothetical protein phrog_20587 unknown function unknown function -1 3335 3460
AFQ95993.1 JX409895_p13 hypothetical protein phrog_3627 unknown function unknown function -1 4297 4455
AFQ96036.1 JX409895_p56 major tail protein phrog_88 major tail protein tail -1 34035 34610
AFQ96004.1 JX409895_p27 DNA-binding phage protein phrog_3 transcriptional repressor transcription regulation -1 11535 11720
AFQ96012.1 JX409895_p40 hypothetical protein phrog_2133 unknown function unknown function -1 17665 17844
AFQ95989.1 JX409895_p43 ATPase phrog_3364 unknown function unknown function -1 18753 19454
AFQ96030.1 JX409895_p46 holin phrog_297 holin lysis -1 21047 21301
AFQ96037.1 JX409895_p60 head-tail connector protein phrog_40 head-tail adaptor Ad1 connector -1 35766 36068
AFQ95975.1 JX409895_p66 hypothetical protein phrog_15305 unknown function unknown function -1 39515 39775
AFQ96008.1 JX409895_p32 hypothetical protein phrog_12396 unknown function unknown function 1 12938 13579
AFQ95979.1 JX409895_p4 hypothetical protein phrog_32555 unknown function unknown function -1 1880 2020
AFQ95983.1 JX409895_p54 hypothetical protein singleton unknown function unknown function -1 33411 33524
AFQ96026.1 JX409895_p20 helicase phrog_16 DNA helicase DNA, RNA and nucleotide metabolism -1 8136 9365
AFQ95994.1 JX409895_p35 hypothetical protein phrog_9031 unknown function unknown function -1 14095 14244
AFQ95997.1 JX409895_p14 hypothetical protein phrog_1485 unknown function unknown function -1 4439 4735
AFQ96009.1 JX409895_p33 hypothetical protein phrog_2253 unknown function unknown function -1 13677 13835
AFQ95987.1 JX409895_p34 hypothetical protein phrog_6930 unknown function unknown function 1 13894 14106
AFQ96003.1 JX409895_p26 hypothetical protein phrog_5866 unknown function unknown function -1 11167 11457
AFQ96017.1 JX409895_p57 hypothetical protein phrog_78 tail terminator connector -1 34626 35051
AFQ96020.1 JX409895_p3 phage encoded transcriptional regulator, ArpU family phrog_248 transcriptional activator transcription regulation -1 1060 1494
AFQ95988.1 JX409895_p42 hypothetical protein phrog_9989 unknown function unknown function -1 18266 18565
AFQ95981.1 JX409895_p11 hypothetical protein phrog_13248 unknown function unknown function -1 3684 3899
AFQ95976.1 JX409895_p67 hypothetical protein phrog_502 membrane protein moron, auxiliary metabolic gene and host takeover -1 39778 39936
AFQ96011.1 JX409895_p38 integrase phrog_1 integrase integration and excision 1 16417 17274
AFQ95978.1 JX409895_p2 hypothetical protein singleton unknown function unknown function 1 578 862
AFQ96014.1 JX409895_p47 hypothetical protein phrog_1009 unknown function unknown function -1 21303 21590
AFQ96034.1 JX409895_p52 minor structural protein phrog_202 distal tail protein Dit tail -1 27949 29460
AFQ96039.1 JX409895_p63 phage ClpP protease phrog_94 head maturation protease head and packaging -1 37459 38130
AFQ96021.1 JX409895_p8 hypothetical protein phrog_121 unknown function unknown function -1 2724 3254
AFQ96041.1 JX409895_p68 phage terminase large subunit phrog_9 terminase large subunit head and packaging -1 39936 41690
AFQ95991.1 JX409895_p5 hypothetical protein phrog_37319 unknown function unknown function -1 2020 2187
AFQ96033.1 JX409895_p51 minor structural protein phrog_588 tail fiber protein and host specificity tail -1 24140 27910
AFQ96023.1 JX409895_p16 DNA primase phrog_7601 unknown function unknown function -1 5376 6296
AFQ96000.1 JX409895_p22 hypothetical protein phrog_4084 unknown function unknown function -1 10146 10394
AFQ95973.1 JX409895_p39 hypothetical protein singleton unknown function unknown function 1 17325 17486
AFQ96031.1 JX409895_p49 hypothetical protein phrog_1060 unknown function unknown function -1 21796 22122
AFQ95974.1 JX409895_p65 hypothetical protein phrog_30491 unknown function unknown function -1 39358 39504
AFQ96032.1 JX409895_p50 minor structural protein phrog_372 tail protein tail -1 22136 24127