Genomic map of Mycobacterium virus Dorothy (JX411620)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
JX411620
Definition
Mycobacterium phage Dorothy, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Cheoctovirus.
DB of origin
PVOG
Length
58866
Host Name
Mycobacterium smegmatis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
104
%GC
61.4
Number of singletons
1
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
AFQ97502.1 JX411620_p48 hypothetical protein phrog_1816 unknown function unknown function 1 36366 36557
AFQ97410.1 JX411620_p14 tapemeasure protein phrog_1942 tail length tape measure protein tail 1 9465 12971
AFQ97446.1 JX411620_p55 WhiB phrog_1333 unknown function unknown function 1 38358 38852
AFQ97485.1 JX411620_p100 hypothetical protein phrog_1385 unknown function unknown function 1 55679 55921
AFQ97461.1 JX411620_p71 DNA methylase phrog_363 DNA methyltransferase other 1 44271 44831
AFQ97473.1 JX411620_p84 hypothetical protein phrog_6727 unknown function unknown function 1 51617 51805
AFQ97494.1 JX411620_p82 hypothetical protein phrog_2142 unknown function unknown function 1 50681 51043
AFQ97402.1 JX411620_p4 capsid maturation protease phrog_1522 head maturation protease head and packaging 1 3596 4351
AFQ97431.1 JX411620_p37 hypothetical protein phrog_1839 unknown function unknown function 1 30470 30562
AFQ97414.1 JX411620_p19 D-Ala-D-Ala carboxypeptidase phrog_382 minor tail protein with lysin activity tail 1 19892 21781
AFQ97503.1 JX411620_p89 hypothetical protein phrog_1545 unknown function unknown function 1 52728 52865
AFQ97501.1 JX411620_p36 hypothetical protein phrog_1791 unknown function unknown function 1 30166 30477
AFQ97445.1 JX411620_p53 hypothetical protein phrog_7605 unknown function unknown function 1 37831 38019
AFQ97482.1 JX411620_p96 hypothetical protein phrog_1869 unknown function unknown function 1 54766 54930
AFQ97465.1 JX411620_p75 DNA methylase phrog_67 DNA methyltransferase other 1 45729 48410
AFQ97481.1 JX411620_p95 HTH DNA binding domain protein phrog_2474 MerR-like transcriptional regulator transcription regulation 1 54545 54769
AFQ97490.1 JX411620_p11 major tail subunit phrog_476 major tail protein tail 1 7537 8418
AFQ97499.1 JX411620_p17 minor tail protein phrog_732 minor tail protein tail 1 16516 17361
AFQ97504.1 JX411620_p46 hypothetical protein phrog_5563 unknown function unknown function 1 36083 36175
AFQ97416.1 JX411620_p21 hypothetical protein phrog_240 head protein head and packaging 1 22955 23296
AFQ97409.1 JX411620_p13 tail assembly chaperone phrog_621 tail assembly chaperone tail 1 8532 9083
AFQ97415.1 JX411620_p20 hypothetical protein phrog_2106 minor tail protein tail 1 21778 22941
AFQ97438.1 JX411620_p44 antirepressor phrog_130 anti-repressor Ant transcription regulation 1 34870 35874
AFQ97421.1 JX411620_p26 hypothetical protein phrog_411 unknown function unknown function 1 25397 25681
AFQ97454.1 JX411620_p63 hypothetical protein phrog_4657 unknown function unknown function 1 41656 42264
AFQ97469.1 JX411620_p79 hypothetical protein phrog_6275 unknown function unknown function 1 49653 50033
AFQ97496.1 JX411620_p2 terminase large subunit phrog_9 terminase large subunit head and packaging 1 571 2208
AFQ97424.1 JX411620_p29 hypothetical protein phrog_747 unknown function unknown function 1 26057 26290
AFQ97467.1 JX411620_p77 hypothetical protein phrog_2447 replication initiation protein DNA, RNA and nucleotide metabolism 1 48545 49396
AFQ97500.1 JX411620_p99 hypothetical protein phrog_1186 unknown function unknown function 1 55281 55682
AFQ97483.1 JX411620_p97 hypothetical protein phrog_1694 unknown function unknown function 1 54937 55095
AFQ97417.1 JX411620_p22 hypothetical protein phrog_2005 minor tail protein tail 1 23319 23573
AFQ97401.1 JX411620_p1 terminase small subunit phrog_226 minor tail protein tail 1 108 563
AFQ97412.1 JX411620_p16 minor tail protein phrog_110 minor tail protein tail 1 14766 16475
AFQ97497.1 JX411620_p3 portal protein phrog_104 portal protein head and packaging 1 2239 3609
AFQ97439.1 JX411620_p45 hypothetical protein phrog_2025 unknown function unknown function 1 35871 36086
AFQ97404.1 JX411620_p6 major capsid protein phrog_267 major head protein head and packaging 1 5047 5868
AFQ97418.1 JX411620_p23 hypothetical protein phrog_2012 minor tail protein tail 1 23587 24225
AFQ97434.1 JX411620_p40 integrase phrog_1 integrase integration and excision 1 31738 33039
AFQ97407.1 JX411620_p9 hypothetical protein phrog_1929 head-tail connector protein connector 1 6779 7105
AFQ97426.1 JX411620_p31 lysin B phrog_102 endolysin lysis 1 27483 28484
AFQ97491.1 JX411620_p12 tail assembly chaperone phrog_978 tail assembly chaperone tail 1 8532 9468
AFQ97495.1 JX411620_p90 hypothetical protein phrog_2278 unknown function unknown function 1 52918 53037
AFQ97436.1 JX411620_p42 immunity repressor phrog_2838 transcriptional repressor transcription regulation -1 33840 34460
AFQ97413.1 JX411620_p18 minor tail protein phrog_346 minor tail protein tail 1 17358 19895
AFQ97466.1 JX411620_p76 DNA methylase phrog_2451 unknown function unknown function 1 48407 48541
AFQ97471.1 JX411620_p81 hypothetical protein phrog_1546 unknown function unknown function 1 50224 50574
AFQ97489.1 JX411620_p104 glycosyltransferase phrog_854 glucosyltransferase moron, auxiliary metabolic gene and host takeover 1 57744 58367
AFQ97474.1 JX411620_p85 hypothetical protein phrog_4152 unknown function unknown function 1 51802 51978
AFQ97422.1 JX411620_p27 hypothetical protein phrog_932 unknown function unknown function 1 25688 25834
AFQ97440.1 JX411620_p47 hypothetical protein phrog_66 excisionase and transcriptional regulator integration and excision 1 36172 36369
AFQ97443.1 JX411620_p51 hypothetical protein phrog_8015 unknown function unknown function 1 37196 37477
AFQ97419.1 JX411620_p24 hypothetical protein phrog_754 minor tail protein tail 1 24222 25046
AFQ97464.1 JX411620_p74 hypothetical protein phrog_780 unknown function unknown function 1 45505 45732
AFQ97455.1 JX411620_p65 hypothetical protein phrog_6938 unknown function unknown function 1 42620 42865
AFQ97444.1 JX411620_p52 hypothetical protein phrog_1849 unknown function unknown function 1 37553 37834
AFQ97458.1 JX411620_p68 hypothetical protein phrog_1311 unknown function unknown function 1 43156 43311
AFQ97405.1 JX411620_p7 hypothetical protein phrog_2377 head-tail adaptor Ad1 connector 1 5877 6446
AFQ97433.1 JX411620_p39 hypothetical protein phrog_2437 unknown function unknown function -1 31139 31342
AFQ97452.1 JX411620_p61 hypothetical protein phrog_2060 DNA methyltransferase other 1 40350 40685
AFQ97451.1 JX411620_p60 hypothetical protein phrog_1834 unknown function unknown function 1 40123 40353
AFQ97468.1 JX411620_p78 hypothetical protein phrog_2080 unknown function unknown function 1 49393 49656
AFQ97493.1 JX411620_p64 HNH endonuclease phrog_740 HNH endonuclease DNA, RNA and nucleotide metabolism 1 42261 42623
AFQ97478.1 JX411620_p91 hypothetical protein phrog_10901 unknown function unknown function 1 53034 53309
AFQ97430.1 JX411620_p35 DnaQ-like protein phrog_403 DNA polymerase exonuclease subunit DNA, RNA and nucleotide metabolism 1 29348 30169
AFQ97498.1 JX411620_p93 hypothetical protein phrog_2247 unknown function unknown function 1 53555 53803
AFQ97442.1 JX411620_p50 hypothetical protein phrog_1797 unknown function unknown function 1 36735 37178
AFQ97463.1 JX411620_p73 hypothetical protein phrog_2001 unknown function unknown function 1 45386 45508
AFQ97411.1 JX411620_p15 minor tail protein phrog_106 minor tail protein tail 1 12972 14681
AFQ97460.1 JX411620_p70 hypothetical protein phrog_6650 unknown function unknown function 1 43879 44274
AFQ97423.1 JX411620_p28 hypothetical protein phrog_1172 unknown function unknown function 1 25831 25983
AFQ97477.1 JX411620_p88 hypothetical protein phrog_1091 unknown function unknown function 1 52513 52677
AFQ97479.1 JX411620_p92 hypothetical protein phrog_6816 unknown function unknown function 1 53309 53551
AFQ97408.1 JX411620_p10 hypothetical protein phrog_813 head-tail adaptor connector 1 7095 7499
AFQ97470.1 JX411620_p80 hypothetical protein phrog_1943 unknown function unknown function 1 50033 50227
AFQ97486.1 JX411620_p101 hypothetical protein phrog_2057 unknown function unknown function 1 55914 56075
AFQ97453.1 JX411620_p62 hypothetical protein phrog_1366 unknown function unknown function 1 40682 41659
AFQ97428.1 JX411620_p33 hypothetical protein phrog_404 minor tail protein tail 1 28730 29104
AFQ97425.1 JX411620_p30 lysin A phrog_700 endolysin lysis 1 26287 27483
AFQ97429.1 JX411620_p34 hypothetical protein phrog_2004 unknown function unknown function 1 29101 29361
AFQ97480.1 JX411620_p94 hypothetical protein phrog_1467 unknown function unknown function 1 53800 54435
AFQ97488.1 JX411620_p103 hypothetical protein phrog_1693 unknown function unknown function 1 57541 57747
AFQ97406.1 JX411620_p8 hypothetical protein phrog_763 head-tail adaptor connector 1 6443 6772
AFQ97462.1 JX411620_p72 hypothetical protein phrog_1008 DNA methyltransferase other 1 44809 45360
AFQ97456.1 JX411620_p66 hypothetical protein phrog_2704 unknown function unknown function 1 42862 43011
AFQ97459.1 JX411620_p69 hypothetical protein phrog_2259 Rnase H DNA, RNA and nucleotide metabolism 1 43304 43882
AFQ97441.1 JX411620_p49 hypothetical protein singleton unknown function unknown function 1 36554 36733
AFQ97457.1 JX411620_p67 hypothetical protein phrog_2070 unknown function unknown function 1 43008 43178
AFQ97448.1 JX411620_p57 WhiB phrog_472 WhiB transcriptional factor transcription regulation 1 39331 39609
AFQ97403.1 JX411620_p5 scaffolding protein phrog_2592 head scaffolding protein head and packaging 1 4378 5028
AFQ97484.1 JX411620_p98 hypothetical protein phrog_3813 unknown function unknown function 1 55117 55284
AFQ97420.1 JX411620_p25 hypothetical protein phrog_686 HTH DNA binding protein DNA, RNA and nucleotide metabolism -1 25051 25248
AFQ97476.1 JX411620_p87 hypothetical protein phrog_12283 unknown function unknown function 1 52163 52516
AFQ97427.1 JX411620_p32 holin phrog_443 holin lysis 1 28500 28733
AFQ97447.1 JX411620_p56 hypothetical protein phrog_2096 unknown function unknown function 1 38849 39334
AFQ97437.1 JX411620_p43 HTH DNA binding domain protein phrog_3 transcriptional repressor transcription regulation 1 34579 34812
AFQ97435.1 JX411620_p41 hypothetical protein phrog_1948 unknown function unknown function -1 33121 33576
AFQ97450.1 JX411620_p59 hypothetical protein phrog_2078 unknown function unknown function 1 39971 40123
AFQ97475.1 JX411620_p86 hypothetical protein phrog_1901 unknown function unknown function 1 51975 52166
AFQ97432.1 JX411620_p38 hypothetical protein phrog_5648 unknown function unknown function -1 30798 31139
AFQ97472.1 JX411620_p83 hypothetical protein phrog_647 unknown function unknown function 1 51040 51411
AFQ97487.1 JX411620_p102 glycosyltransferase phrog_1579 glycosyltransferase moron, auxiliary metabolic gene and host takeover 1 56102 57538
AFQ97492.1 JX411620_p54 hypothetical protein phrog_658 unknown function unknown function 1 38023 38358
AFQ97449.1 JX411620_p58 HTH DNA binding domain protein phrog_664 DNA binding protein DNA, RNA and nucleotide metabolism 1 39606 39971