Genomic map of Escherichia virus M13 (JX412914)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
JX412914
Definition
Enterobacteria phage M13 isolate WT variety Rutgers, complete
Molecule type
DNA
Genome structure
circular
Taxonomy
Viruses; Monodnaviria; Loebvirae; Hofneiviricota; Faserviricetes; Tubulavirales; Inoviridae; Inovirus.
DB of origin
NUCCORE
Length
6407
Host Name
Escherichia coli
Host domain
Bacteria
Is prophage?
undef
Number of proteins
10
%GC
40.76
Number of singletons
0
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
AFQ21793.1 JX412914_p8 small hydrophobic protein phrog_1944 minor head protein head and packaging 1 2856 3194
AFQ21794.1 JX412914_p4 phage assembly protein phrog_7781 minor coat protein head and packaging 1 1108 1209
AFQ21788.1 JX412914_p9 phage assembly protein phrog_1675 morphogenesis (protein I of M13) head and packaging 1 3196 4242
AFQ21791.1 JX412914_p10 phage assembly protein phrog_1012 assembly (protein IV of M13) head and packaging 1 4220 5500
AFQ21797.1 JX412914_p2 hypothetical protein phrog_8855 replication protein DNA, RNA and nucleotide metabolism 1 496 831
AFQ21795.1 JX412914_p6 major coat protein phrog_1646 major coat protein head and packaging 1 1301 1522
AFQ21789.1 JX412914_p1 hypothetical protein phrog_702 replication protein DNA, RNA and nucleotide metabolism 1 1 831
AFQ21789.1 JX412914_p1 hypothetical protein phrog_702 replication protein DNA, RNA and nucleotide metabolism 1 6006 6407
AFQ21792.1 JX412914_p3 helix destabilizing protein phrog_1199 single strand DNA binding protein DNA, RNA and nucleotide metabolism 1 843 1106
AFQ21790.1 JX412914_p7 structural protein phrog_8482 attachment protein head and packaging 1 1579 2853
AFQ21796.1 JX412914_p5 hypothetical protein phrog_10143 minor coat protein head and packaging 1 1206 1304