| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
JX889246 |
Definition |
Streptomyces phage phiCAM, complete genome. |
Molecule type |
DNA |
Genome structure |
circular |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Arquatrovirinae; Camvirus; Streptomyces virus phiCAM. |
DB of origin |
PVOG |
Length |
50348 |
Host Name |
Streptomyces coelicolor |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
72 |
%GC |
65.58 |
Number of singletons |
5 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| AFV51330.1 | JX889246_p10 | protein of an unannotated phage | phrog_233 | head scaffolding protein | head and packaging | 1 | 8461 | 8991 |
| AFV51351.1 | JX889246_p31 | protein of an unannotated phage | phrog_466 | exonuclease | DNA, RNA and nucleotide metabolism | 1 | 27359 | 28312 |
| AFV51345.1 | JX889246_p25 | protein of an unannotated phage | phrog_9468 | unknown function | unknown function | 1 | 22546 | 22932 |
| AFV51356.1 | JX889246_p36 | protein of an unannotated phage | phrog_244 | RusA-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 30877 | 31242 |
| AFV51358.1 | JX889246_p38 | protein of an unannotated phage | phrog_47 | DNA primase | DNA, RNA and nucleotide metabolism | 1 | 31902 | 32324 |
| AFV51324.1 | JX889246_p4 | protein of an unannotated phage | phrog_452 | endonuclease | DNA, RNA and nucleotide metabolism | 1 | 1710 | 2057 |
| AFV51348.1 | JX889246_p28 | protein of an unannotated phage | phrog_1493 | endolysin | lysis | 1 | 24820 | 25500 |
| AFV51340.1 | JX889246_p20 | protein of an unannotated phage | phrog_33 | distal tail protein Dit | tail | 1 | 17629 | 18483 |
| AFV51327.1 | JX889246_p7 | protein of an unannotated phage | phrog_104 | portal protein | head and packaging | 1 | 4309 | 5625 |
| AFV51392.1 | JX889246_p72 | protein of an unannotated phage | phrog_2563 | unknown function | unknown function | -1 | 49092 | 49472 |
| AFV51385.1 | JX889246_p65 | protein of an unannotated phage | phrog_3994 | unknown function | unknown function | -1 | 45970 | 46443 |
| AFV51369.1 | JX889246_p49 | protein of an unannotated phage | phrog_95 | integrase | integration and excision | 1 | 38659 | 40071 |
| AFV51367.1 | JX889246_p47 | protein of an unannotated phage | phrog_17008 | unknown function | unknown function | 1 | 37787 | 38257 |
| AFV51322.1 | JX889246_p2 | protein of an unannotated phage | singleton | unknown function | unknown function | 1 | 1171 | 1308 |
| AFV51334.1 | JX889246_p14 | protein of an unannotated phage | phrog_321 | tail completion or Neck1 protein | connector | 1 | 11010 | 11402 |
| AFV51366.1 | JX889246_p46 | protein of an unannotated phage | phrog_1223 | nucloid associated Lsr2-like | DNA, RNA and nucleotide metabolism | 1 | 37446 | 37760 |
| AFV51341.1 | JX889246_p21 | protein of an unannotated phage | phrog_538 | minor tail protein | tail | 1 | 18698 | 19705 |
| AFV51355.1 | JX889246_p35 | protein of an unannotated phage | phrog_243 | DnaB-like replicative helicase | DNA, RNA and nucleotide metabolism | 1 | 30026 | 30799 |
| AFV51335.1 | JX889246_p15 | protein of an unannotated phage | phrog_123 | tail terminator | connector | 1 | 11402 | 11905 |
| AFV51365.1 | JX889246_p45 | protein of an unannotated phage | phrog_367 | ribonucleotide reductase | DNA, RNA and nucleotide metabolism | 1 | 35519 | 37381 |
| AFV51360.1 | JX889246_p40 | protein of an unannotated phage | phrog_3979 | unknown function | unknown function | 1 | 32662 | 32871 |
| AFV51390.1 | JX889246_p70 | protein of an unannotated phage | phrog_4313 | unknown function | unknown function | -1 | 48040 | 48732 |
| AFV51388.1 | JX889246_p68 | protein of an unannotated phage | phrog_2355 | unknown function | unknown function | -1 | 47385 | 47795 |
| AFV51357.1 | JX889246_p37 | protein of an unannotated phage | phrog_360 | DNA primase | DNA, RNA and nucleotide metabolism | 1 | 31394 | 31825 |
| AFV51325.1 | JX889246_p5 | protein of an unannotated phage | phrog_226 | minor tail protein | tail | 1 | 2073 | 2501 |
| AFV51354.1 | JX889246_p34 | protein of an unannotated phage | phrog_174 | dCMP deaminase | DNA, RNA and nucleotide metabolism | 1 | 29556 | 29906 |
| AFV51373.1 | JX889246_p53 | protein of an unannotated phage | phrog_4071 | unknown function | unknown function | -1 | 41498 | 41755 |
| AFV51337.1 | JX889246_p17 | protein of an unannotated phage | phrog_330 | tail assembly chaperone | tail | 1 | 12801 | 13124 |
| AFV51328.1 | JX889246_p8 | protein of an unannotated phage | singleton | unknown function | unknown function | 1 | 6171 | 7034 |
| AFV51374.1 | JX889246_p54 | protein of an unannotated phage | phrog_26679 | unknown function | unknown function | -1 | 41752 | 41976 |
| AFV51331.1 | JX889246_p11 | protein of an unannotated phage | phrog_283 | major head protein | head and packaging | 1 | 9127 | 10152 |
| AFV51321.1 | JX889246_p1 | protein of an unannotated phage | phrog_4207 | unknown function | unknown function | -1 | 103 | 297 |
| AFV51363.1 | JX889246_p43 | protein of an unannotated phage | phrog_3512 | sigma factor | transcription regulation | 1 | 34498 | 34788 |
| AFV51389.1 | JX889246_p69 | protein of an unannotated phage | phrog_4275 | unknown function | unknown function | -1 | 47798 | 47950 |
| AFV51352.1 | JX889246_p32 | protein of an unannotated phage | phrog_3912 | unknown function | unknown function | 1 | 28560 | 28925 |
| AFV51368.1 | JX889246_p48 | protein of an unannotated phage | singleton | unknown function | unknown function | 1 | 38306 | 38530 |
| AFV51353.1 | JX889246_p33 | protein of an unannotated phage | phrog_1288 | unknown function | unknown function | 1 | 29004 | 29423 |
| AFV51361.1 | JX889246_p41 | protein of an unannotated phage | phrog_284 | exonuclease | DNA, RNA and nucleotide metabolism | 1 | 33092 | 34042 |
| AFV51372.1 | JX889246_p52 | protein of an unannotated phage | phrog_15428 | unknown function | unknown function | -1 | 40966 | 41496 |
| AFV51364.1 | JX889246_p44 | protein of an unannotated phage | phrog_4123 | unknown function | unknown function | 1 | 34878 | 35216 |
| AFV51346.1 | JX889246_p26 | protein of an unannotated phage | phrog_988 | tail protein | tail | 1 | 23149 | 24261 |
| AFV51382.1 | JX889246_p62 | protein of an unannotated phage | phrog_4785 | unknown function | unknown function | -1 | 44900 | 45181 |
| AFV51371.1 | JX889246_p51 | protein of an unannotated phage | phrog_85 | thymidylate synthase | DNA, RNA and nucleotide metabolism | -1 | 40250 | 40930 |
| AFV51377.1 | JX889246_p57 | protein of an unannotated phage | phrog_4024 | unknown function | unknown function | -1 | 42722 | 43102 |
| AFV51386.1 | JX889246_p66 | protein of an unannotated phage | phrog_4239 | unknown function | unknown function | -1 | 46525 | 46935 |
| AFV51378.1 | JX889246_p58 | protein of an unannotated phage | phrog_139 | deoxynucleoside monophosphate kinase | other | -1 | 43177 | 43773 |
| AFV51350.1 | JX889246_p30 | protein of an unannotated phage | phrog_3929 | transcriptional repressor | transcription regulation | 1 | 26264 | 26719 |
| AFV51362.1 | JX889246_p42 | protein of an unannotated phage | phrog_1340 | unknown function | unknown function | 1 | 34039 | 34392 |
| AFV51333.1 | JX889246_p13 | protein of an unannotated phage | phrog_320 | head closure Hc1 | connector | 1 | 10678 | 11013 |
| AFV51387.1 | JX889246_p67 | protein of an unannotated phage | phrog_6619 | unknown function | unknown function | -1 | 47056 | 47310 |
| AFV51342.1 | JX889246_p22 | protein of an unannotated phage | phrog_1276 | unknown function | unknown function | 1 | 19709 | 20017 |
| AFV51343.1 | JX889246_p23 | protein of an unannotated phage | phrog_4013 | unknown function | unknown function | 1 | 20017 | 21960 |
| AFV51336.1 | JX889246_p16 | protein of an unannotated phage | phrog_117 | major tail protein | tail | 1 | 12156 | 12665 |
| AFV51338.1 | JX889246_p18 | protein of an unannotated phage | singleton | unknown function | unknown function | 1 | 13322 | 13507 |
| AFV51375.1 | JX889246_p55 | protein of an unannotated phage | phrog_3424 | unknown function | unknown function | -1 | 41973 | 42218 |
| AFV51376.1 | JX889246_p56 | protein of an unannotated phage | phrog_3965 | unknown function | unknown function | -1 | 42231 | 42662 |
| AFV51326.1 | JX889246_p6 | protein of an unannotated phage | phrog_9 | terminase large subunit | head and packaging | 1 | 2516 | 4162 |
| AFV51383.1 | JX889246_p63 | protein of an unannotated phage | phrog_18679 | unknown function | unknown function | -1 | 45287 | 45496 |
| AFV51323.1 | JX889246_p3 | protein of an unannotated phage | phrog_3555 | unknown function | unknown function | 1 | 1464 | 1688 |
| AFV51344.1 | JX889246_p24 | protein of an unannotated phage | phrog_4817 | unknown function | unknown function | 1 | 21988 | 22497 |
| AFV51332.1 | JX889246_p12 | protein of an unannotated phage | phrog_137 | head-tail adaptor Ad1 | connector | 1 | 10223 | 10681 |
| AFV51370.1 | JX889246_p50 | protein of an unannotated phage | singleton | unknown function | unknown function | -1 | 40113 | 40253 |
| AFV51349.1 | JX889246_p29 | protein of an unannotated phage | phrog_4092 | unknown function | unknown function | 1 | 25497 | 25778 |
| AFV51379.1 | JX889246_p59 | protein of an unannotated phage | phrog_3991 | unknown function | unknown function | -1 | 43770 | 44024 |
| AFV51380.1 | JX889246_p60 | protein of an unannotated phage | phrog_4842 | HNH endonuclease | DNA, RNA and nucleotide metabolism | -1 | 44024 | 44491 |
| AFV51339.1 | JX889246_p19 | protein of an unannotated phage | phrog_305 | tail length tape measure protein | tail | 1 | 13655 | 17626 |
| AFV51347.1 | JX889246_p27 | protein of an unannotated phage | phrog_3534 | unknown function | unknown function | 1 | 24270 | 24608 |
| AFV51384.1 | JX889246_p64 | protein of an unannotated phage | phrog_4867 | unknown function | unknown function | -1 | 45514 | 45873 |
| AFV51329.1 | JX889246_p9 | protein of an unannotated phage | phrog_193 | head maturation protease | head and packaging | 1 | 7527 | 8456 |
| AFV51391.1 | JX889246_p71 | protein of an unannotated phage | phrog_4485 | unknown function | unknown function | -1 | 48876 | 48995 |
| AFV51381.1 | JX889246_p61 | protein of an unannotated phage | phrog_3908 | unknown function | unknown function | -1 | 44608 | 44832 |
| AFV51359.1 | JX889246_p39 | protein of an unannotated phage | phrog_4022 | unknown function | unknown function | 1 | 32321 | 32662 |