Genomic map of Streptomyces phage phiCAM (JX889246)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
JX889246
Definition
Streptomyces phage phiCAM, complete genome.
Molecule type
DNA
Genome structure
circular
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Arquatrovirinae; Camvirus; Streptomyces virus phiCAM.
DB of origin
PVOG
Length
50348
Host Name
Streptomyces coelicolor
Host domain
Bacteria
Is prophage?
undef
Number of proteins
72
%GC
65.58
Number of singletons
5
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
AFV51330.1 JX889246_p10 protein of an unannotated phage phrog_233 head scaffolding protein head and packaging 1 8461 8991
AFV51351.1 JX889246_p31 protein of an unannotated phage phrog_466 exonuclease DNA, RNA and nucleotide metabolism 1 27359 28312
AFV51345.1 JX889246_p25 protein of an unannotated phage phrog_9468 unknown function unknown function 1 22546 22932
AFV51356.1 JX889246_p36 protein of an unannotated phage phrog_244 RusA-like Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 30877 31242
AFV51358.1 JX889246_p38 protein of an unannotated phage phrog_47 DNA primase DNA, RNA and nucleotide metabolism 1 31902 32324
AFV51324.1 JX889246_p4 protein of an unannotated phage phrog_452 endonuclease DNA, RNA and nucleotide metabolism 1 1710 2057
AFV51348.1 JX889246_p28 protein of an unannotated phage phrog_1493 endolysin lysis 1 24820 25500
AFV51340.1 JX889246_p20 protein of an unannotated phage phrog_33 distal tail protein Dit tail 1 17629 18483
AFV51327.1 JX889246_p7 protein of an unannotated phage phrog_104 portal protein head and packaging 1 4309 5625
AFV51392.1 JX889246_p72 protein of an unannotated phage phrog_2563 unknown function unknown function -1 49092 49472
AFV51385.1 JX889246_p65 protein of an unannotated phage phrog_3994 unknown function unknown function -1 45970 46443
AFV51369.1 JX889246_p49 protein of an unannotated phage phrog_95 integrase integration and excision 1 38659 40071
AFV51367.1 JX889246_p47 protein of an unannotated phage phrog_17008 unknown function unknown function 1 37787 38257
AFV51322.1 JX889246_p2 protein of an unannotated phage singleton unknown function unknown function 1 1171 1308
AFV51334.1 JX889246_p14 protein of an unannotated phage phrog_321 tail completion or Neck1 protein connector 1 11010 11402
AFV51366.1 JX889246_p46 protein of an unannotated phage phrog_1223 nucloid associated Lsr2-like DNA, RNA and nucleotide metabolism 1 37446 37760
AFV51341.1 JX889246_p21 protein of an unannotated phage phrog_538 minor tail protein tail 1 18698 19705
AFV51355.1 JX889246_p35 protein of an unannotated phage phrog_243 DnaB-like replicative helicase DNA, RNA and nucleotide metabolism 1 30026 30799
AFV51335.1 JX889246_p15 protein of an unannotated phage phrog_123 tail terminator connector 1 11402 11905
AFV51365.1 JX889246_p45 protein of an unannotated phage phrog_367 ribonucleotide reductase DNA, RNA and nucleotide metabolism 1 35519 37381
AFV51360.1 JX889246_p40 protein of an unannotated phage phrog_3979 unknown function unknown function 1 32662 32871
AFV51390.1 JX889246_p70 protein of an unannotated phage phrog_4313 unknown function unknown function -1 48040 48732
AFV51388.1 JX889246_p68 protein of an unannotated phage phrog_2355 unknown function unknown function -1 47385 47795
AFV51357.1 JX889246_p37 protein of an unannotated phage phrog_360 DNA primase DNA, RNA and nucleotide metabolism 1 31394 31825
AFV51325.1 JX889246_p5 protein of an unannotated phage phrog_226 minor tail protein tail 1 2073 2501
AFV51354.1 JX889246_p34 protein of an unannotated phage phrog_174 dCMP deaminase DNA, RNA and nucleotide metabolism 1 29556 29906
AFV51373.1 JX889246_p53 protein of an unannotated phage phrog_4071 unknown function unknown function -1 41498 41755
AFV51337.1 JX889246_p17 protein of an unannotated phage phrog_330 tail assembly chaperone tail 1 12801 13124
AFV51328.1 JX889246_p8 protein of an unannotated phage singleton unknown function unknown function 1 6171 7034
AFV51374.1 JX889246_p54 protein of an unannotated phage phrog_26679 unknown function unknown function -1 41752 41976
AFV51331.1 JX889246_p11 protein of an unannotated phage phrog_283 major head protein head and packaging 1 9127 10152
AFV51321.1 JX889246_p1 protein of an unannotated phage phrog_4207 unknown function unknown function -1 103 297
AFV51363.1 JX889246_p43 protein of an unannotated phage phrog_3512 sigma factor transcription regulation 1 34498 34788
AFV51389.1 JX889246_p69 protein of an unannotated phage phrog_4275 unknown function unknown function -1 47798 47950
AFV51352.1 JX889246_p32 protein of an unannotated phage phrog_3912 unknown function unknown function 1 28560 28925
AFV51368.1 JX889246_p48 protein of an unannotated phage singleton unknown function unknown function 1 38306 38530
AFV51353.1 JX889246_p33 protein of an unannotated phage phrog_1288 unknown function unknown function 1 29004 29423
AFV51361.1 JX889246_p41 protein of an unannotated phage phrog_284 exonuclease DNA, RNA and nucleotide metabolism 1 33092 34042
AFV51372.1 JX889246_p52 protein of an unannotated phage phrog_15428 unknown function unknown function -1 40966 41496
AFV51364.1 JX889246_p44 protein of an unannotated phage phrog_4123 unknown function unknown function 1 34878 35216
AFV51346.1 JX889246_p26 protein of an unannotated phage phrog_988 tail protein tail 1 23149 24261
AFV51382.1 JX889246_p62 protein of an unannotated phage phrog_4785 unknown function unknown function -1 44900 45181
AFV51371.1 JX889246_p51 protein of an unannotated phage phrog_85 thymidylate synthase DNA, RNA and nucleotide metabolism -1 40250 40930
AFV51377.1 JX889246_p57 protein of an unannotated phage phrog_4024 unknown function unknown function -1 42722 43102
AFV51386.1 JX889246_p66 protein of an unannotated phage phrog_4239 unknown function unknown function -1 46525 46935
AFV51378.1 JX889246_p58 protein of an unannotated phage phrog_139 deoxynucleoside monophosphate kinase other -1 43177 43773
AFV51350.1 JX889246_p30 protein of an unannotated phage phrog_3929 transcriptional repressor transcription regulation 1 26264 26719
AFV51362.1 JX889246_p42 protein of an unannotated phage phrog_1340 unknown function unknown function 1 34039 34392
AFV51333.1 JX889246_p13 protein of an unannotated phage phrog_320 head closure Hc1 connector 1 10678 11013
AFV51387.1 JX889246_p67 protein of an unannotated phage phrog_6619 unknown function unknown function -1 47056 47310
AFV51342.1 JX889246_p22 protein of an unannotated phage phrog_1276 unknown function unknown function 1 19709 20017
AFV51343.1 JX889246_p23 protein of an unannotated phage phrog_4013 unknown function unknown function 1 20017 21960
AFV51336.1 JX889246_p16 protein of an unannotated phage phrog_117 major tail protein tail 1 12156 12665
AFV51338.1 JX889246_p18 protein of an unannotated phage singleton unknown function unknown function 1 13322 13507
AFV51375.1 JX889246_p55 protein of an unannotated phage phrog_3424 unknown function unknown function -1 41973 42218
AFV51376.1 JX889246_p56 protein of an unannotated phage phrog_3965 unknown function unknown function -1 42231 42662
AFV51326.1 JX889246_p6 protein of an unannotated phage phrog_9 terminase large subunit head and packaging 1 2516 4162
AFV51383.1 JX889246_p63 protein of an unannotated phage phrog_18679 unknown function unknown function -1 45287 45496
AFV51323.1 JX889246_p3 protein of an unannotated phage phrog_3555 unknown function unknown function 1 1464 1688
AFV51344.1 JX889246_p24 protein of an unannotated phage phrog_4817 unknown function unknown function 1 21988 22497
AFV51332.1 JX889246_p12 protein of an unannotated phage phrog_137 head-tail adaptor Ad1 connector 1 10223 10681
AFV51370.1 JX889246_p50 protein of an unannotated phage singleton unknown function unknown function -1 40113 40253
AFV51349.1 JX889246_p29 protein of an unannotated phage phrog_4092 unknown function unknown function 1 25497 25778
AFV51379.1 JX889246_p59 protein of an unannotated phage phrog_3991 unknown function unknown function -1 43770 44024
AFV51380.1 JX889246_p60 protein of an unannotated phage phrog_4842 HNH endonuclease DNA, RNA and nucleotide metabolism -1 44024 44491
AFV51339.1 JX889246_p19 protein of an unannotated phage phrog_305 tail length tape measure protein tail 1 13655 17626
AFV51347.1 JX889246_p27 protein of an unannotated phage phrog_3534 unknown function unknown function 1 24270 24608
AFV51384.1 JX889246_p64 protein of an unannotated phage phrog_4867 unknown function unknown function -1 45514 45873
AFV51329.1 JX889246_p9 protein of an unannotated phage phrog_193 head maturation protease head and packaging 1 7527 8456
AFV51391.1 JX889246_p71 protein of an unannotated phage phrog_4485 unknown function unknown function -1 48876 48995
AFV51381.1 JX889246_p61 protein of an unannotated phage phrog_3908 unknown function unknown function -1 44608 44832
AFV51359.1 JX889246_p39 protein of an unannotated phage phrog_4022 unknown function unknown function 1 32321 32662