Genomic map of Salmonella phage FSL SP-124 (KC139515)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
KC139515
Definition
Salmonella phage FSL SP-124, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Chivirus; Salmonella virus FSLSP088.
DB of origin
PVOG
Length
59245
Host Name
Salmonella enterica
Host domain
Bacteria
Is prophage?
undef
Number of proteins
71
%GC
56.53
Number of singletons
0
Number of paralogs
2

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
AGF88018.1 KC139515_p34 hypothetical protein phrog_1026 Rz-like spanin lysis -1 17635 17832
AGF87997.1 KC139515_p13 hypothetical protein phrog_7734 unknown function unknown function 1 6754 7089
AGF88021.1 KC139515_p37 hypothetical protein phrog_7226 unknown function unknown function -1 19005 21134
AGF88037.1 KC139515_p53 hypothetical protein phrog_4858 unknown function unknown function -1 40401 40766
AGF88047.1 KC139515_p63 hypothetical protein phrog_93 endonuclease DNA, RNA and nucleotide metabolism -1 50032 50319
AGF88034.1 KC139515_p50 hypothetical protein phrog_807 major tail protein with Ig-like domain tail -1 38122 39261
AGF88046.1 KC139515_p62 helicase phrog_62 DNA helicase DNA, RNA and nucleotide metabolism -1 48510 49985
AGF87999.1 KC139515_p15 exonuclease RdgC phrog_724 exonuclease recombination-associated DNA, RNA and nucleotide metabolism 1 7398 8471
AGF88017.1 KC139515_p33 hypothetical protein phrog_1275 Rz-like spanin lysis -1 17505 17687
AGF87996.1 KC139515_p12 hypothetical protein phrog_7942 unknown function unknown function 1 6327 6767
AGF88003.1 KC139515_p19 hypothetical protein phrog_8641 unknown function unknown function 1 9920 10576
AGF87993.1 KC139515_p9 hypothetical protein phrog_3199 unknown function unknown function -1 4310 4849
AGF88023.1 KC139515_p39 hypothetical protein phrog_2448 unknown function unknown function -1 23421 24383
AGF87992.1 KC139515_p8 hypothetical protein phrog_10759 unknown function unknown function -1 3610 4092
AGF88032.1 KC139515_p48 pre-tape measure frameshift protein G-T phrog_9221 tail length tape measure protein tail -1 37322 37519
AGF88039.1 KC139515_p55 capsid protein E phrog_29 major head protein head and packaging -1 41124 42188
AGF88027.1 KC139515_p43 hypothetical protein phrog_1196 tail assembly chaperone tail -1 30031 30270
AGF88020.1 KC139515_p36 lysis protein B phrog_7686 Rz-like spanin lysis -1 18603 18941
AGF88008.1 KC139515_p24 hypothetical protein phrog_8705 unknown function unknown function 1 13172 13393
AGF87990.1 KC139515_p6 hypothetical protein phrog_8635 unknown function unknown function -1 2829 3050
AGF88013.1 KC139515_p29 hypothetical protein phrog_8098 unknown function unknown function 1 15016 15720
AGF88004.1 KC139515_p20 hypothetical protein phrog_8386 unknown function unknown function 1 10573 11673
AGF88050.1 KC139515_p66 hypothetical protein phrog_69 exonuclease DNA, RNA and nucleotide metabolism -1 53078 54415
AGF88044.1 KC139515_p60 terminase large subunit phrog_15 terminase large subunit head and packaging -1 45889 47964
AGF88007.1 KC139515_p23 hypothetical protein phrog_9067 unknown function unknown function 1 12981 13175
AGF88030.1 KC139515_p46 hypothetical protein phrog_1082 tail assembly protein tail -1 31340 33028
AGF88019.1 KC139515_p35 lysis protein A phrog_873 endolysin head and packaging -1 17886 18599
AGF87987.1 KC139515_p3 hypothetical protein phrog_8059 unknown function unknown function -1 1041 1247
AGF87998.1 KC139515_p14 hypothetical protein phrog_7965 unknown function unknown function 1 7076 7417
AGF88025.1 KC139515_p41 tail fiber protein phrog_7049 tail fiber protein tail -1 25411 26151
AGF88001.1 KC139515_p17 hypothetical protein phrog_7587 unknown function unknown function 1 8712 8987
AGF88026.1 KC139515_p42 hypothetical protein phrog_6284 tail protein tail -1 26151 30041
AGF88012.1 KC139515_p28 hypothetical protein phrog_8264 unknown function unknown function 1 14562 15014
AGF88053.1 KC139515_p69 hypothetical protein phrog_7401 unknown function unknown function 1 55449 55730
AGF88009.1 KC139515_p25 hypothetical protein phrog_9072 thymidylate synthase complementing protein DNA, RNA and nucleotide metabolism 1 13383 13895
AGF88048.1 KC139515_p64 DNA polymerase I phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism -1 50321 52360
AGF88028.1 KC139515_p44 tail assembly protein phrog_1180 tail assembly chaperone tail -1 30270 30500
AGF87995.1 KC139515_p11 hypothetical protein phrog_6647 unknown function unknown function 1 5884 6255
AGF88052.1 KC139515_p68 hypothetical protein phrog_7721 unknown function unknown function -1 54800 55210
AGF88031.1 KC139515_p47 tape measure protein phrog_2335 tail length tape measure protein tail -1 33034 37329
AGF88041.1 KC139515_p57 prohead protease ClpP phrog_53 head maturation protease head and packaging -1 42635 43906
AGF88029.1 KC139515_p45 structural phage protein phrog_778 tail assembly protein tail -1 30512 31330
AGF87985.1 KC139515_p1 hypothetical protein phrog_8116 unknown function unknown function -1 553 804
AGF88055.1 KC139515_p71 helix-turn-helix XRE-family of transcriptional regulators phrog_18318 HTH DNA binding protein DNA, RNA and nucleotide metabolism -1 58357 58683
AGF88024.1 KC139515_p40 hypothetical protein phrog_2448 unknown function unknown function -1 24394 25401
AGF87994.1 KC139515_p10 hypothetical protein phrog_4445 unknown function unknown function -1 4863 5123
AGF88010.1 KC139515_p26 hypothetical protein phrog_3012 unknown function unknown function 1 13976 14257
AGF87988.1 KC139515_p4 hypothetical protein phrog_3786 unknown function unknown function -1 1250 1522
AGF88036.1 KC139515_p52 hypothetical protein phrog_27 tail completion or Neck1 protein connector -1 39775 40401
AGF88002.1 KC139515_p18 hypothetical protein phrog_6886 unknown function unknown function 1 9177 9923
AGF88045.1 KC139515_p61 TerS phrog_141 terminase small subunit head and packaging -1 47954 48523
AGF88038.1 KC139515_p54 hypothetical protein phrog_7559 unknown function unknown function -1 40769 41062
AGF87991.1 KC139515_p7 hypothetical protein phrog_9514 unknown function unknown function -1 3047 3595
AGF88040.1 KC139515_p56 decorator protein D phrog_49 head decoration head and packaging -1 42201 42605
AGF87989.1 KC139515_p5 hypothetical protein phrog_10087 unknown function unknown function -1 1534 2703
AGF88011.1 KC139515_p27 hypothetical protein phrog_9301 unknown function unknown function 1 14254 14565
AGF88049.1 KC139515_p65 hypothetical protein phrog_112 Gp2.5-like ssDNA binding protein and ssDNA annealing protein DNA, RNA and nucleotide metabolism -1 52427 53023
AGF88051.1 KC139515_p67 hypothetical protein phrog_8318 unknown function unknown function -1 54408 54737
AGF87986.1 KC139515_p2 hypothetical protein phrog_7646 unknown function unknown function -1 797 1048
AGF88015.1 KC139515_p31 NinC protein phrog_424 phosphoadenosine phosphosulfate reductase moron, auxiliary metabolic gene and host takeover 1 16132 17046
AGF88000.1 KC139515_p16 hypothetical protein phrog_7200 unknown function unknown function 1 8474 8707
AGF88042.1 KC139515_p58 portal protein phrog_21 portal protein head and packaging -1 43948 45627
AGF88054.1 KC139515_p70 DR0530-like primase phrog_1156 DNA primase DNA, RNA and nucleotide metabolism 1 55727 58309
AGF88016.1 KC139515_p32 nucleoside 2-deoxyribosyltransferase phrog_355 nucleoside 2-deoxyribosyltransferase DNA, RNA and nucleotide metabolism 1 17043 17504
AGF88035.1 KC139515_p51 hypothetical protein phrog_5078 tail terminator connector -1 39275 39778
AGF88014.1 KC139515_p30 hypothetical protein phrog_25081 unknown function unknown function 1 15885 16112
AGF88033.1 KC139515_p49 pre-tape measure frameshift protein G-T phrog_5260 tail protein tail -1 37564 38025
AGF88006.1 KC139515_p22 hypothetical protein phrog_8209 unknown function unknown function 1 12437 12970
AGF88022.1 KC139515_p38 hypothetical protein phrog_2448 unknown function unknown function -1 22388 23407
AGF88043.1 KC139515_p59 head-tail joining protein lambda W phrog_75 head-tail adaptor Ad1 connector -1 45624 45878
AGF88005.1 KC139515_p21 DNA adenine methylase phrog_111 DNA methyltransferase other 1 11673 12359