| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
KC182544 |
Definition |
Lactococcus phage 936, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Skunavirus; unclassified Skunavirus. |
DB of origin |
PVOG |
Length |
27302 |
Host Name |
Lactococcus |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
49 |
%GC |
34.51 |
Number of singletons |
0 |
Number of paralogs |
2 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| AGI10746.1 | KC182544_p5 | protease | phrog_80 | head maturation protease | head and packaging | 1 | 3814 | 4350 |
| AGI10778.1 | KC182544_p37 | hypothetical protein | phrog_1278 | single strand DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 20632 | 20991 |
| AGI10788.1 | KC182544_p47 | hypothetical protein | phrog_827 | Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 25728 | 26210 |
| AGI10750.1 | KC182544_p9 | hypothetical protein | phrog_1484 | virion structural protein | head and packaging | 1 | 6112 | 6450 |
| AGI10745.1 | KC182544_p4 | portal protein | phrog_12 | portal protein | head and packaging | 1 | 2697 | 3833 |
| AGI10755.1 | KC182544_p14 | tape measure protein | phrog_58 | tail length tape measure protein | tail | 1 | 8582 | 11461 |
| AGI10743.1 | KC182544_p2 | terminase large subunit | phrog_9 | terminase large subunit | head and packaging | 1 | 788 | 2410 |
| AGI10785.1 | KC182544_p44 | HNH endonuclease | phrog_59 | HNH endonuclease | DNA, RNA and nucleotide metabolism | -1 | 24839 | 25330 |
| AGI10779.1 | KC182544_p38 | sak protein | phrog_659 | Sak-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | -1 | 20996 | 21562 |
| AGI10789.1 | KC182544_p48 | hypothetical protein | phrog_1652 | unknown function | unknown function | 1 | 26207 | 26374 |
| AGI10744.1 | KC182544_p3 | HNH endonuclease | phrog_119 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 2400 | 2684 |
| AGI10784.1 | KC182544_p43 | hypothetical protein | phrog_7915 | unknown function | unknown function | -1 | 23715 | 24407 |
| AGI10786.1 | KC182544_p45 | hypothetical protein | phrog_1952 | unknown function | unknown function | 1 | 25467 | 25595 |
| AGI10766.1 | KC182544_p25 | hypothetical protein | phrog_1441 | unknown function | unknown function | -1 | 17217 | 17384 |
| AGI10773.1 | KC182544_p32 | hypothetical protein | phrog_4546 | unknown function | unknown function | -1 | 18942 | 19052 |
| AGI10761.1 | KC182544_p20 | endolysin | phrog_670 | endolysin | lysis | 1 | 14957 | 15661 |
| AGI10752.1 | KC182544_p11 | hypothetical protein | phrog_1433 | major tail protein | tail | 1 | 6819 | 7724 |
| AGI10764.1 | KC182544_p23 | HNH endonuclease | phrog_59 | HNH endonuclease | DNA, RNA and nucleotide metabolism | -1 | 16245 | 16697 |
| AGI10763.1 | KC182544_p22 | hypothetical protein | phrog_1430 | unknown function | unknown function | -1 | 15979 | 16251 |
| AGI10782.1 | KC182544_p41 | hypothetical protein | phrog_1405 | unknown function | unknown function | -1 | 22496 | 22753 |
| AGI10790.1 | KC182544_p49 | hypothetical protein | phrog_6252 | unknown function | unknown function | 1 | 26994 | 27179 |
| AGI10787.1 | KC182544_p46 | hypothetical protein | phrog_1436 | unknown function | unknown function | 1 | 25600 | 25731 |
| AGI10774.1 | KC182544_p33 | hypothetical protein | phrog_1919 | unknown function | unknown function | -1 | 19088 | 19402 |
| AGI10762.1 | KC182544_p21 | hypothetical protein | phrog_3775 | transglycosylase | other | -1 | 15720 | 15917 |
| AGI10760.1 | KC182544_p19 | holin | phrog_1379 | unknown function | unknown function | 1 | 14607 | 14960 |
| AGI10775.1 | KC182544_p34 | hypothetical protein | phrog_59 | HNH endonuclease | DNA, RNA and nucleotide metabolism | -1 | 19399 | 19821 |
| AGI10769.1 | KC182544_p28 | hypothetical protein | phrog_1225 | unknown function | unknown function | -1 | 17882 | 18190 |
| AGI10758.1 | KC182544_p17 | hypothetical protein | phrog_1434 | unknown function | unknown function | 1 | 13456 | 13764 |
| AGI10742.1 | KC182544_p1 | terminase small subunit | phrog_1437 | terminase small subunit | head and packaging | 1 | 263 | 787 |
| AGI10783.1 | KC182544_p42 | DNA polymerase subunit | phrog_1284 | unknown function | unknown function | -1 | 22746 | 23696 |
| AGI10753.1 | KC182544_p12 | hypothetical protein | phrog_1420 | virion structural protein | head and packaging | 1 | 7775 | 8050 |
| AGI10749.1 | KC182544_p8 | hypothetical protein | phrog_1429 | virion structural protein | head and packaging | 1 | 5808 | 6122 |
| AGI10768.1 | KC182544_p27 | hypothetical protein | phrog_1509 | unknown function | unknown function | -1 | 17553 | 17807 |
| AGI10759.1 | KC182544_p18 | receptor binding protein | phrog_1630 | receptor binding tail protein | tail | 1 | 13754 | 14575 |
| AGI10751.1 | KC182544_p10 | hypothetical protein | phrog_1440 | virion structural protein | head and packaging | 1 | 6441 | 6806 |
| AGI10777.1 | KC182544_p36 | hypothetical protein | phrog_1295 | unknown function | unknown function | -1 | 20404 | 20619 |
| AGI10765.1 | KC182544_p24 | hypothetical protein | phrog_1415 | unknown function | unknown function | -1 | 16870 | 17217 |
| AGI10767.1 | KC182544_p26 | hypothetical protein | phrog_1820 | unknown function | unknown function | -1 | 17384 | 17560 |
| AGI10781.1 | KC182544_p40 | hypothetical protein | phrog_2228 | unknown function | unknown function | -1 | 22056 | 22439 |
| AGI10771.1 | KC182544_p30 | hypothetical protein | phrog_1083 | unknown function | unknown function | -1 | 18320 | 18610 |
| AGI10780.1 | KC182544_p39 | hypothetical protein | phrog_1449 | unknown function | unknown function | -1 | 21549 | 21956 |
| AGI10772.1 | KC182544_p31 | hypothetical protein | phrog_1825 | DNA methyltransferase | other | -1 | 18699 | 18941 |
| AGI10776.1 | KC182544_p35 | hypothetical protein | phrog_1317 | unknown function | unknown function | -1 | 19898 | 20407 |
| AGI10757.1 | KC182544_p16 | hypothetical protein | phrog_1432 | tail associated lysin | tail | 1 | 12357 | 13481 |
| AGI10770.1 | KC182544_p29 | hypothetical protein | phrog_1508 | unknown function | unknown function | -1 | 18190 | 18309 |
| AGI10748.1 | KC182544_p7 | hypothetical protein | phrog_1428 | head-tail connector protein | connector | 1 | 5545 | 5808 |
| AGI10754.1 | KC182544_p13 | hypothetical protein | phrog_1421 | virion structural protein | head and packaging | 1 | 8070 | 8582 |
| AGI10747.1 | KC182544_p6 | hypothetical protein | phrog_1393 | minor head protein | head and packaging | 1 | 4343 | 5524 |
| AGI10756.1 | KC182544_p15 | hypothetical protein | phrog_1424 | tail protein | tail | 1 | 11461 | 12357 |