| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
KC182548 |
Definition |
Lactococcus lactis phage P113G, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Skunavirus; unclassified Skunavirus. |
DB of origin |
PVOG |
Length |
30796 |
Host Name |
Lactococcus lactis |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
58 |
%GC |
34.14 |
Number of singletons |
3 |
Number of paralogs |
3 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| AGI10991.1 | KC182548_p37 | hypothetical protein | phrog_1919 | unknown function | unknown function | -1 | 21605 | 21937 |
| AGI10978.1 | KC182548_p24 | hypothetical protein | phrog_5087 | unknown function | unknown function | -1 | 17310 | 17651 |
| AGI11003.1 | KC182548_p49 | hypothetical protein | singleton | unknown function | unknown function | -1 | 26880 | 27110 |
| AGI11008.1 | KC182548_p54 | hypothetical protein | phrog_1436 | unknown function | unknown function | 1 | 28933 | 29064 |
| AGI10996.1 | KC182548_p42 | HNH endonuclease | phrog_59 | HNH endonuclease | DNA, RNA and nucleotide metabolism | -1 | 23665 | 24165 |
| AGI11010.1 | KC182548_p56 | hypothetical protein | phrog_1652 | unknown function | unknown function | 1 | 29540 | 29707 |
| AGI10970.1 | KC182548_p16 | hypothetical protein | phrog_1424 | tail protein | tail | 1 | 11920 | 12816 |
| AGI10973.1 | KC182548_p19 | receptor binding protein | phrog_6779 | tail protein | tail | 1 | 14216 | 15019 |
| AGI10958.1 | KC182548_p4 | hypothetical protein | phrog_12 | portal protein | head and packaging | 1 | 2666 | 3820 |
| AGI10994.1 | KC182548_p40 | hypothetical protein | phrog_1278 | single strand DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 22739 | 23098 |
| AGI10977.1 | KC182548_p23 | hypothetical protein | phrog_3874 | transglycosylase | other | -1 | 16684 | 17220 |
| AGI10992.1 | KC182548_p38 | hypothetical protein | phrog_1317 | unknown function | unknown function | -1 | 21999 | 22511 |
| AGI10980.1 | KC182548_p26 | hypothetical protein | phrog_1430 | unknown function | unknown function | -1 | 17865 | 18134 |
| AGI10989.1 | KC182548_p35 | hypothetical protein | phrog_1825 | DNA methyltransferase | other | -1 | 21078 | 21323 |
| AGI10997.1 | KC182548_p43 | hypothetical protein | phrog_1449 | unknown function | unknown function | -1 | 24152 | 24559 |
| AGI10972.1 | KC182548_p18 | hypothetical protein | phrog_1434 | unknown function | unknown function | 1 | 13918 | 14226 |
| AGI10998.1 | KC182548_p44 | hypothetical protein | phrog_2228 | unknown function | unknown function | -1 | 24659 | 25036 |
| AGI10971.1 | KC182548_p17 | hypothetical protein | phrog_1432 | tail associated lysin | tail | 1 | 12816 | 13943 |
| AGI10993.1 | KC182548_p39 | hypothetical protein | phrog_1295 | unknown function | unknown function | -1 | 22508 | 22723 |
| AGI10962.1 | KC182548_p8 | hypothetical protein | phrog_1429 | virion structural protein | head and packaging | 1 | 5795 | 6109 |
| AGI10956.1 | KC182548_p2 | terminase large subunit | phrog_9 | terminase large subunit | head and packaging | 1 | 757 | 2379 |
| AGI10976.1 | KC182548_p22 | HNH endonuclease | phrog_59 | HNH endonuclease | DNA, RNA and nucleotide metabolism | -1 | 16214 | 16690 |
| AGI10986.1 | KC182548_p32 | hypothetical protein | phrog_3530 | unknown function | unknown function | -1 | 19828 | 20349 |
| AGI11000.1 | KC182548_p46 | hypothetical protein | phrog_1284 | unknown function | unknown function | -1 | 25345 | 26241 |
| AGI10964.1 | KC182548_p10 | hypothetical protein | phrog_1440 | virion structural protein | head and packaging | 1 | 6438 | 6803 |
| AGI11009.1 | KC182548_p55 | holliday junction endonuclease | phrog_827 | Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 29061 | 29543 |
| AGI11002.1 | KC182548_p48 | hypothetical protein | singleton | unknown function | unknown function | -1 | 26639 | 26905 |
| AGI10975.1 | KC182548_p21 | endolysin | phrog_670 | endolysin | lysis | 1 | 15391 | 16092 |
| AGI11007.1 | KC182548_p53 | hypothetical protein | phrog_1952 | unknown function | unknown function | 1 | 28800 | 28928 |
| AGI11001.1 | KC182548_p47 | HNH endonuclease | phrog_959 | HNH endonuclease | DNA, RNA and nucleotide metabolism | -1 | 26238 | 26588 |
| AGI10988.1 | KC182548_p34 | hypothetical protein | phrog_1083 | unknown function | unknown function | -1 | 20699 | 21055 |
| AGI10966.1 | KC182548_p12 | tail accessory fiber/neck passage structure | phrog_5983 | tail protein | tail | 1 | 7723 | 8343 |
| AGI10979.1 | KC182548_p25 | hypothetical protein | phrog_5152 | unknown function | unknown function | -1 | 17596 | 17868 |
| AGI10967.1 | KC182548_p13 | hypothetical protein | phrog_1420 | virion structural protein | head and packaging | 1 | 8363 | 8638 |
| AGI10995.1 | KC182548_p41 | sak protein | phrog_659 | Sak-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | -1 | 23102 | 23680 |
| AGI11005.1 | KC182548_p51 | hypothetical protein | phrog_5487 | unknown function | unknown function | -1 | 27320 | 27484 |
| AGI10983.1 | KC182548_p29 | hypothetical protein | phrog_1820 | unknown function | unknown function | -1 | 18821 | 19018 |
| AGI11012.1 | KC182548_p58 | HNH endonuclease | phrog_959 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 30357 | 30740 |
| AGI11004.1 | KC182548_p50 | hypothetical protein | phrog_9199 | unknown function | unknown function | -1 | 27120 | 27308 |
| AGI10965.1 | KC182548_p11 | hypothetical protein | phrog_1433 | major tail protein | tail | 1 | 6816 | 7721 |
| AGI10981.1 | KC182548_p27 | hypothetical protein | phrog_1415 | unknown function | unknown function | -1 | 18307 | 18654 |
| AGI10990.1 | KC182548_p36 | hypothetical protein | phrog_10825 | unknown function | unknown function | -1 | 21323 | 21589 |
| AGI11006.1 | KC182548_p52 | HNH endonuclease | phrog_59 | HNH endonuclease | DNA, RNA and nucleotide metabolism | -1 | 28168 | 28659 |
| AGI10968.1 | KC182548_p14 | hypothetical protein | phrog_1421 | virion structural protein | head and packaging | 1 | 8658 | 9170 |
| AGI10960.1 | KC182548_p6 | hypothetical protein | phrog_1393 | minor head protein | head and packaging | 1 | 4330 | 5511 |
| AGI10963.1 | KC182548_p9 | hypothetical protein | phrog_1484 | virion structural protein | head and packaging | 1 | 6106 | 6447 |
| AGI10959.1 | KC182548_p5 | protease | phrog_80 | head maturation protease | head and packaging | 1 | 3801 | 4337 |
| AGI10955.1 | KC182548_p1 | terminase small subunit | phrog_1437 | terminase small subunit | head and packaging | 1 | 232 | 756 |
| AGI10987.1 | KC182548_p33 | hypothetical protein | phrog_1225 | unknown function | unknown function | -1 | 20264 | 20623 |
| AGI10985.1 | KC182548_p31 | hypothetical protein | phrog_1509 | unknown function | unknown function | -1 | 19244 | 19501 |
| AGI10984.1 | KC182548_p30 | hypothetical protein | phrog_2530 | unknown function | unknown function | -1 | 19011 | 19217 |
| AGI10969.1 | KC182548_p15 | tape-measure protein | phrog_58 | tail length tape measure protein | tail | 1 | 9170 | 11920 |
| AGI10999.1 | KC182548_p45 | hypothetical protein | phrog_1405 | unknown function | unknown function | -1 | 25089 | 25352 |
| AGI10957.1 | KC182548_p3 | HNH endonuclease | phrog_119 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 2369 | 2653 |
| AGI10961.1 | KC182548_p7 | hypothetical protein | phrog_1428 | head-tail connector protein | connector | 1 | 5532 | 5795 |
| AGI10974.1 | KC182548_p20 | holin | phrog_1379 | unknown function | unknown function | 1 | 15119 | 15394 |
| AGI11011.1 | KC182548_p57 | hypothetical protein | singleton | unknown function | unknown function | 1 | 30060 | 30197 |
| AGI10982.1 | KC182548_p28 | hypothetical protein | phrog_1441 | unknown function | unknown function | -1 | 18654 | 18893 |