| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
KC182550 |
Definition |
Lactococcus lactis phage P475, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Skunavirus; unclassified Skunavirus. |
DB of origin |
PVOG |
Length |
30961 |
Host Name |
Lactococcus lactis |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
57 |
%GC |
34.32 |
Number of singletons |
1 |
Number of paralogs |
3 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| AGI11098.1 | KC182550_p25 | hypothetical protein | phrog_5152 | unknown function | unknown function | -1 | 17577 | 17825 |
| AGI11091.1 | KC182550_p18 | hypothetical protein | phrog_1432 | tail associated lysin | tail | 1 | 13284 | 14411 |
| AGI11120.1 | KC182550_p47 | DNA polymerase | phrog_1284 | unknown function | unknown function | -1 | 25764 | 26711 |
| AGI11130.1 | KC182550_p57 | hypothetical protein | phrog_6252 | unknown function | unknown function | 1 | 30743 | 30874 |
| AGI11085.1 | KC182550_p12 | hypothetical protein | phrog_1433 | major tail protein | tail | 1 | 7281 | 8186 |
| AGI11105.1 | KC182550_p32 | hypothetical protein | phrog_3530 | unknown function | unknown function | -1 | 19813 | 20283 |
| AGI11123.1 | KC182550_p50 | hypothetical protein | singleton | unknown function | unknown function | -1 | 27468 | 27566 |
| AGI11102.1 | KC182550_p29 | hypothetical protein | phrog_2530 | unknown function | unknown function | -1 | 18992 | 19195 |
| AGI11080.1 | KC182550_p7 | hypothetical protein | phrog_1428 | head-tail connector protein | connector | 1 | 5513 | 5776 |
| AGI11084.1 | KC182550_p11 | hypothetical protein | phrog_1440 | virion structural protein | head and packaging | 1 | 6903 | 7268 |
| AGI11078.1 | KC182550_p5 | prohead protease | phrog_80 | head maturation protease | head and packaging | 1 | 3782 | 4318 |
| AGI11118.1 | KC182550_p45 | hypothetical protein | phrog_2228 | unknown function | unknown function | -1 | 25078 | 25455 |
| AGI11129.1 | KC182550_p56 | hypothetical protein | phrog_1652 | unknown function | unknown function | 1 | 30121 | 30288 |
| AGI11113.1 | KC182550_p40 | hypothetical protein | phrog_1295 | unknown function | unknown function | -1 | 22926 | 23141 |
| AGI11121.1 | KC182550_p48 | HNH endonuclease | phrog_59 | HNH endonuclease | DNA, RNA and nucleotide metabolism | -1 | 26698 | 27135 |
| AGI11100.1 | KC182550_p27 | hypothetical protein | phrog_1415 | unknown function | unknown function | -1 | 18288 | 18635 |
| AGI11097.1 | KC182550_p24 | hypothetical protein | phrog_5087 | unknown function | unknown function | -1 | 17291 | 17548 |
| AGI11101.1 | KC182550_p28 | hypothetical protein | phrog_1441 | unknown function | unknown function | -1 | 18635 | 18859 |
| AGI11103.1 | KC182550_p30 | hypothetical protein | phrog_1509 | unknown function | unknown function | -1 | 19225 | 19482 |
| AGI11088.1 | KC182550_p15 | hypothetical protein | phrog_1421 | virion structural protein | head and packaging | 1 | 9126 | 9638 |
| AGI11074.1 | KC182550_p1 | terminase small subunit | phrog_1437 | terminase small subunit | head and packaging | 1 | 231 | 755 |
| AGI11083.1 | KC182550_p10 | hypothetical protein | phrog_1484 | virion structural protein | head and packaging | 1 | 6574 | 6912 |
| AGI11086.1 | KC182550_p13 | hypothetical protein | phrog_5983 | tail protein | tail | 1 | 8188 | 8811 |
| AGI11089.1 | KC182550_p16 | tail tape measure protein | phrog_58 | tail length tape measure protein | tail | 1 | 9638 | 12388 |
| AGI11112.1 | KC182550_p39 | hypothetical protein | phrog_1317 | unknown function | unknown function | -1 | 22417 | 22929 |
| AGI11117.1 | KC182550_p44 | hypothetical protein | phrog_1632 | unknown function | unknown function | -1 | 24791 | 25081 |
| AGI11128.1 | KC182550_p55 | holliday junction endonuclease | phrog_827 | Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 29642 | 30124 |
| AGI11090.1 | KC182550_p17 | hypothetical protein | phrog_1424 | tail protein | tail | 1 | 12388 | 13284 |
| AGI11122.1 | KC182550_p49 | hypothetical protein | phrog_12970 | unknown function | unknown function | -1 | 27128 | 27298 |
| AGI11099.1 | KC182550_p26 | hypothetical protein | phrog_1430 | unknown function | unknown function | -1 | 17846 | 18115 |
| AGI11104.1 | KC182550_p31 | hypothetical protein | phrog_3365 | unknown function | unknown function | -1 | 19545 | 19733 |
| AGI11075.1 | KC182550_p2 | terminase large subunit | phrog_9 | terminase large subunit | head and packaging | 1 | 756 | 2378 |
| AGI11126.1 | KC182550_p53 | hypothetical protein | phrog_5027 | unknown function | unknown function | 1 | 29282 | 29509 |
| AGI11094.1 | KC182550_p21 | holin | phrog_1379 | unknown function | unknown function | 1 | 15507 | 15860 |
| AGI11093.1 | KC182550_p20 | receptor binding protein | phrog_6465 | tail protein | tail | 1 | 14684 | 15493 |
| AGI11087.1 | KC182550_p14 | hypothetical protein | phrog_1420 | virion structural protein | head and packaging | 1 | 8831 | 9106 |
| AGI11077.1 | KC182550_p4 | portal protein | phrog_12 | portal protein | head and packaging | 1 | 2665 | 3801 |
| AGI11092.1 | KC182550_p19 | hypothetical protein | phrog_1434 | unknown function | unknown function | 1 | 14401 | 14694 |
| AGI11114.1 | KC182550_p41 | hypothetical protein | phrog_1278 | single strand DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 23157 | 23516 |
| AGI11096.1 | KC182550_p23 | hypothetical protein | phrog_3874 | transglycosylase | other | -1 | 16665 | 17201 |
| AGI11125.1 | KC182550_p52 | hypothetical protein | phrog_1656 | unknown function | unknown function | -1 | 29063 | 29251 |
| AGI11095.1 | KC182550_p22 | endolysin | phrog_670 | endolysin | lysis | 1 | 15857 | 16558 |
| AGI11124.1 | KC182550_p51 | hypothetical protein | phrog_7915 | unknown function | unknown function | -1 | 27936 | 28613 |
| AGI11119.1 | KC182550_p46 | hypothetical protein | phrog_1405 | unknown function | unknown function | -1 | 25508 | 25771 |
| AGI11106.1 | KC182550_p33 | hypothetical protein | phrog_1225 | unknown function | unknown function | -1 | 20255 | 20560 |
| AGI11111.1 | KC182550_p38 | HNH endonuclease | phrog_59 | HNH endonuclease | DNA, RNA and nucleotide metabolism | -1 | 21907 | 22332 |
| AGI11081.1 | KC182550_p8 | hypothetical protein | phrog_1429 | virion structural protein | head and packaging | 1 | 5776 | 6090 |
| AGI11107.1 | KC182550_p34 | hypothetical protein | phrog_1508 | unknown function | unknown function | -1 | 20560 | 20679 |
| AGI11110.1 | KC182550_p37 | hypothetical protein | phrog_1919 | unknown function | unknown function | -1 | 21596 | 21901 |
| AGI11115.1 | KC182550_p42 | hypothetical protein | phrog_659 | Sak-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | -1 | 23521 | 24099 |
| AGI11082.1 | KC182550_p9 | HNH endonuclease | phrog_59 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 6087 | 6584 |
| AGI11079.1 | KC182550_p6 | hypothetical protein | phrog_1393 | minor head protein | head and packaging | 1 | 4311 | 5492 |
| AGI11127.1 | KC182550_p54 | hypothetical protein | phrog_1436 | unknown function | unknown function | 1 | 29514 | 29645 |
| AGI11076.1 | KC182550_p3 | HNH endonuclease | phrog_119 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 2368 | 2652 |
| AGI11108.1 | KC182550_p35 | hypothetical protein | phrog_1083 | unknown function | unknown function | -1 | 20690 | 21013 |
| AGI11109.1 | KC182550_p36 | hypothetical protein | phrog_10825 | unknown function | unknown function | -1 | 21314 | 21580 |
| AGI11116.1 | KC182550_p43 | HNH endonuclease | phrog_59 | HNH endonuclease | DNA, RNA and nucleotide metabolism | -1 | 24084 | 24689 |