Genomic map of Lactococcus lactis phage P475 (KC182550)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
KC182550
Definition
Lactococcus lactis phage P475, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Skunavirus; unclassified Skunavirus.
DB of origin
PVOG
Length
30961
Host Name
Lactococcus lactis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
57
%GC
34.32
Number of singletons
1
Number of paralogs
3

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
AGI11098.1 KC182550_p25 hypothetical protein phrog_5152 unknown function unknown function -1 17577 17825
AGI11091.1 KC182550_p18 hypothetical protein phrog_1432 tail associated lysin tail 1 13284 14411
AGI11120.1 KC182550_p47 DNA polymerase phrog_1284 unknown function unknown function -1 25764 26711
AGI11130.1 KC182550_p57 hypothetical protein phrog_6252 unknown function unknown function 1 30743 30874
AGI11085.1 KC182550_p12 hypothetical protein phrog_1433 major tail protein tail 1 7281 8186
AGI11105.1 KC182550_p32 hypothetical protein phrog_3530 unknown function unknown function -1 19813 20283
AGI11123.1 KC182550_p50 hypothetical protein singleton unknown function unknown function -1 27468 27566
AGI11102.1 KC182550_p29 hypothetical protein phrog_2530 unknown function unknown function -1 18992 19195
AGI11080.1 KC182550_p7 hypothetical protein phrog_1428 head-tail connector protein connector 1 5513 5776
AGI11084.1 KC182550_p11 hypothetical protein phrog_1440 virion structural protein head and packaging 1 6903 7268
AGI11078.1 KC182550_p5 prohead protease phrog_80 head maturation protease head and packaging 1 3782 4318
AGI11118.1 KC182550_p45 hypothetical protein phrog_2228 unknown function unknown function -1 25078 25455
AGI11129.1 KC182550_p56 hypothetical protein phrog_1652 unknown function unknown function 1 30121 30288
AGI11113.1 KC182550_p40 hypothetical protein phrog_1295 unknown function unknown function -1 22926 23141
AGI11121.1 KC182550_p48 HNH endonuclease phrog_59 HNH endonuclease DNA, RNA and nucleotide metabolism -1 26698 27135
AGI11100.1 KC182550_p27 hypothetical protein phrog_1415 unknown function unknown function -1 18288 18635
AGI11097.1 KC182550_p24 hypothetical protein phrog_5087 unknown function unknown function -1 17291 17548
AGI11101.1 KC182550_p28 hypothetical protein phrog_1441 unknown function unknown function -1 18635 18859
AGI11103.1 KC182550_p30 hypothetical protein phrog_1509 unknown function unknown function -1 19225 19482
AGI11088.1 KC182550_p15 hypothetical protein phrog_1421 virion structural protein head and packaging 1 9126 9638
AGI11074.1 KC182550_p1 terminase small subunit phrog_1437 terminase small subunit head and packaging 1 231 755
AGI11083.1 KC182550_p10 hypothetical protein phrog_1484 virion structural protein head and packaging 1 6574 6912
AGI11086.1 KC182550_p13 hypothetical protein phrog_5983 tail protein tail 1 8188 8811
AGI11089.1 KC182550_p16 tail tape measure protein phrog_58 tail length tape measure protein tail 1 9638 12388
AGI11112.1 KC182550_p39 hypothetical protein phrog_1317 unknown function unknown function -1 22417 22929
AGI11117.1 KC182550_p44 hypothetical protein phrog_1632 unknown function unknown function -1 24791 25081
AGI11128.1 KC182550_p55 holliday junction endonuclease phrog_827 Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 29642 30124
AGI11090.1 KC182550_p17 hypothetical protein phrog_1424 tail protein tail 1 12388 13284
AGI11122.1 KC182550_p49 hypothetical protein phrog_12970 unknown function unknown function -1 27128 27298
AGI11099.1 KC182550_p26 hypothetical protein phrog_1430 unknown function unknown function -1 17846 18115
AGI11104.1 KC182550_p31 hypothetical protein phrog_3365 unknown function unknown function -1 19545 19733
AGI11075.1 KC182550_p2 terminase large subunit phrog_9 terminase large subunit head and packaging 1 756 2378
AGI11126.1 KC182550_p53 hypothetical protein phrog_5027 unknown function unknown function 1 29282 29509
AGI11094.1 KC182550_p21 holin phrog_1379 unknown function unknown function 1 15507 15860
AGI11093.1 KC182550_p20 receptor binding protein phrog_6465 tail protein tail 1 14684 15493
AGI11087.1 KC182550_p14 hypothetical protein phrog_1420 virion structural protein head and packaging 1 8831 9106
AGI11077.1 KC182550_p4 portal protein phrog_12 portal protein head and packaging 1 2665 3801
AGI11092.1 KC182550_p19 hypothetical protein phrog_1434 unknown function unknown function 1 14401 14694
AGI11114.1 KC182550_p41 hypothetical protein phrog_1278 single strand DNA binding protein DNA, RNA and nucleotide metabolism -1 23157 23516
AGI11096.1 KC182550_p23 hypothetical protein phrog_3874 transglycosylase other -1 16665 17201
AGI11125.1 KC182550_p52 hypothetical protein phrog_1656 unknown function unknown function -1 29063 29251
AGI11095.1 KC182550_p22 endolysin phrog_670 endolysin lysis 1 15857 16558
AGI11124.1 KC182550_p51 hypothetical protein phrog_7915 unknown function unknown function -1 27936 28613
AGI11119.1 KC182550_p46 hypothetical protein phrog_1405 unknown function unknown function -1 25508 25771
AGI11106.1 KC182550_p33 hypothetical protein phrog_1225 unknown function unknown function -1 20255 20560
AGI11111.1 KC182550_p38 HNH endonuclease phrog_59 HNH endonuclease DNA, RNA and nucleotide metabolism -1 21907 22332
AGI11081.1 KC182550_p8 hypothetical protein phrog_1429 virion structural protein head and packaging 1 5776 6090
AGI11107.1 KC182550_p34 hypothetical protein phrog_1508 unknown function unknown function -1 20560 20679
AGI11110.1 KC182550_p37 hypothetical protein phrog_1919 unknown function unknown function -1 21596 21901
AGI11115.1 KC182550_p42 hypothetical protein phrog_659 Sak-like ssDNA annealing protein DNA, RNA and nucleotide metabolism -1 23521 24099
AGI11082.1 KC182550_p9 HNH endonuclease phrog_59 HNH endonuclease DNA, RNA and nucleotide metabolism 1 6087 6584
AGI11079.1 KC182550_p6 hypothetical protein phrog_1393 minor head protein head and packaging 1 4311 5492
AGI11127.1 KC182550_p54 hypothetical protein phrog_1436 unknown function unknown function 1 29514 29645
AGI11076.1 KC182550_p3 HNH endonuclease phrog_119 HNH endonuclease DNA, RNA and nucleotide metabolism 1 2368 2652
AGI11108.1 KC182550_p35 hypothetical protein phrog_1083 unknown function unknown function -1 20690 21013
AGI11109.1 KC182550_p36 hypothetical protein phrog_10825 unknown function unknown function -1 21314 21580
AGI11116.1 KC182550_p43 HNH endonuclease phrog_59 HNH endonuclease DNA, RNA and nucleotide metabolism -1 24084 24689