| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
KC206276 |
Definition |
Escherichia phage EC1-UPM, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae; Gamaleyavirus; Escherichia virus EC1UPM. |
DB of origin |
PVOG |
Length |
70912 |
Host Name |
Escherichia coli |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
80 |
%GC |
42.88 |
Number of singletons |
2 |
Number of paralogs |
1 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| AGC31564.1 | KC206276_p55 | hypothetical protein | phrog_9565 | unknown function | unknown function | 1 | 35449 | 35649 |
| AGC31577.1 | KC206276_p68 | holin protein | phrog_1356 | holin | lysis | -1 | 59526 | 59786 |
| AGC31542.1 | KC206276_p33 | hypothetical protein | singleton | unknown function | unknown function | 1 | 14648 | 14746 |
| AGC31501.1 | KC206276_p72 | tail protein | phrog_2125 | virion structural protein | head and packaging | -1 | 65508 | 66218 |
| AGC31561.1 | KC206276_p52 | hypothetical protein | phrog_7641 | unknown function | unknown function | 1 | 32371 | 32811 |
| AGC31568.1 | KC206276_p59 | hypothetical protein | phrog_2220 | unknown function | unknown function | -1 | 49049 | 51703 |
| AGC31543.1 | KC206276_p34 | hypothetical protein | phrog_9004 | unknown function | unknown function | 1 | 14739 | 15068 |
| AGC31520.1 | KC206276_p11 | hypothetical protein | phrog_289 | GTP-binding domain | other | 1 | 2990 | 3346 |
| AGC31560.1 | KC206276_p51 | hypothetical protein | phrog_159 | RuvC-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 31815 | 32369 |
| AGC31502.1 | KC206276_p73 | terminase subunit A | phrog_38 | terminase large subunit | head and packaging | -1 | 66225 | 67814 |
| AGC31524.1 | KC206276_p15 | hypothetical protein | phrog_14487 | unknown function | unknown function | 1 | 4274 | 4534 |
| AGC31546.1 | KC206276_p37 | rIIB-like protein | phrog_2886 | RIIB lysis inhibitor | lysis | 1 | 17852 | 19909 |
| AGC31531.1 | KC206276_p22 | hypothetical protein | phrog_7665 | unknown function | unknown function | 1 | 8583 | 8768 |
| AGC31510.1 | KC206276_p1 | hypothetical protein | phrog_5020 | unknown function | unknown function | 1 | 190 | 513 |
| AGC31579.1 | KC206276_p70 | hypothetical protein | phrog_4217 | tail protein | tail | -1 | 60327 | 62441 |
| AGC31558.1 | KC206276_p49 | hypothetical protein | phrog_124 | Sak4-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | 1 | 30220 | 30972 |
| AGC31505.1 | KC206276_p76 | hypothetical protein | phrog_9160 | unknown function | unknown function | 1 | 69159 | 69557 |
| AGC31518.1 | KC206276_p9 | hypothetical protein | phrog_10124 | unknown function | unknown function | 1 | 2526 | 2759 |
| AGC31507.1 | KC206276_p78 | hypothetical protein | phrog_12099 | unknown function | unknown function | 1 | 69841 | 70164 |
| AGC31506.1 | KC206276_p77 | hypothetical protein | phrog_11661 | unknown function | unknown function | 1 | 69523 | 69837 |
| AGC31516.1 | KC206276_p7 | hypothetical protein | phrog_7648 | unknown function | unknown function | 1 | 2018 | 2146 |
| AGC31567.1 | KC206276_p58 | structural protein | phrog_2646 | unknown function | unknown function | -1 | 48586 | 49035 |
| AGC31537.1 | KC206276_p28 | membrane immunity protein | phrog_1039 | immunity to superinfection | moron, auxiliary metabolic gene and host takeover | 1 | 12110 | 12352 |
| AGC31521.1 | KC206276_p12 | hypothetical protein | phrog_1972 | unknown function | unknown function | 1 | 3347 | 3601 |
| AGC31544.1 | KC206276_p35 | hypothetical protein | phrog_7471 | unknown function | unknown function | 1 | 15061 | 15252 |
| AGC31528.1 | KC206276_p19 | hypothetical protein | phrog_7508 | unknown function | unknown function | 1 | 7935 | 8123 |
| AGC31522.1 | KC206276_p13 | hypothetical protein | phrog_7827 | unknown function | unknown function | 1 | 3598 | 3918 |
| AGC31545.1 | KC206276_p36 | rIIA-like protein | phrog_2979 | RIIA lysis inhibitor | lysis | 1 | 15280 | 17847 |
| AGC31578.1 | KC206276_p69 | hypothetical protein | phrog_5211 | unknown function | unknown function | -1 | 59771 | 60055 |
| AGC31573.1 | KC206276_p64 | hypothetical protein | phrog_2346 | unknown function | unknown function | -1 | 55783 | 56127 |
| AGC31549.1 | KC206276_p40 | DNA helicase | phrog_325 | Dda-like helicase | DNA, RNA and nucleotide metabolism | 1 | 20777 | 22087 |
| AGC31572.1 | KC206276_p63 | hypothetical protein | phrog_2120 | tail length tape measure protein | tail | -1 | 54543 | 55763 |
| AGC31536.1 | KC206276_p27 | hypothetical protein | phrog_7594 | unknown function | unknown function | 1 | 11827 | 12036 |
| AGC31517.1 | KC206276_p8 | hypothetical protein | phrog_464 | unknown function | unknown function | 1 | 2225 | 2542 |
| AGC31529.1 | KC206276_p20 | hypothetical protein | phrog_19185 | unknown function | unknown function | 1 | 8120 | 8380 |
| AGC31547.1 | KC206276_p38 | hypothetical protein | phrog_6377 | unknown function | unknown function | 1 | 19972 | 20367 |
| AGC31519.1 | KC206276_p10 | hypothetical protein | phrog_6887 | unknown function | unknown function | 1 | 2772 | 2993 |
| AGC31532.1 | KC206276_p23 | hypothetical protein | phrog_11132 | unknown function | unknown function | 1 | 8769 | 9098 |
| AGC31527.1 | KC206276_p18 | capsid decorating protein | phrog_2973 | Hoc-like head decoration | head and packaging | 1 | 6996 | 7829 |
| AGC31556.1 | KC206276_p47 | pathogenesis-related transcriptional factor and ERF protein | phrog_99 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 27532 | 28020 |
| AGC31534.1 | KC206276_p25 | hypothetical protein | phrog_1314 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 10193 | 11368 |
| AGC31509.1 | KC206276_p80 | hypothetical protein | phrog_16338 | unknown function | unknown function | 1 | 70486 | 70812 |
| AGC31512.1 | KC206276_p3 | hypothetical protein | phrog_20790 | unknown function | unknown function | 1 | 802 | 1017 |
| AGC31570.1 | KC206276_p61 | hypothetical protein | phrog_2130 | unknown function | unknown function | -1 | 52618 | 53250 |
| AGC31503.1 | KC206276_p74 | hypothetical protein | phrog_2109 | unknown function | unknown function | -1 | 67807 | 68496 |
| AGC31525.1 | KC206276_p16 | RNA polymerase subunit B | phrog_2166 | N4-like RNA polymerase | DNA, RNA and nucleotide metabolism | 1 | 4588 | 5406 |
| AGC31574.1 | KC206276_p65 | portal protein | phrog_1216 | portal protein | head and packaging | -1 | 56141 | 58411 |
| AGC31575.1 | KC206276_p66 | Rz/RzI spanin protein | phrog_6197 | Rz-like spanin | lysis | -1 | 58414 | 58920 |
| AGC31565.1 | KC206276_p56 | virion RNA polymerase | phrog_2206 | virion RNA polymerase | DNA, RNA and nucleotide metabolism | -1 | 35685 | 46523 |
| AGC31513.1 | KC206276_p4 | RNA polymerase RNAP1 subunit A | phrog_4099 | unknown function | unknown function | 1 | 1145 | 1525 |
| AGC31548.1 | KC206276_p39 | hypothetical protein | phrog_671 | nucleotide pyrophosphohydrolase | other | 1 | 20414 | 20743 |
| AGC31504.1 | KC206276_p75 | hypothetical protein | phrog_7213 | unknown function | unknown function | 1 | 68680 | 68958 |
| AGC31535.1 | KC206276_p26 | dCTP deaminase | phrog_1663 | dCTP deaminase | DNA, RNA and nucleotide metabolism | 1 | 11365 | 11817 |
| AGC31538.1 | KC206276_p29 | hypothetical protein | phrog_12812 | unknown function | unknown function | 1 | 12470 | 12850 |
| AGC31550.1 | KC206276_p41 | hypothetical protein | phrog_4881 | unknown function | unknown function | 1 | 22098 | 22628 |
| AGC31514.1 | KC206276_p5 | hypothetical protein | phrog_13158 | unknown function | unknown function | 1 | 1666 | 1854 |
| AGC31566.1 | KC206276_p57 | structural protein | phrog_6126 | virion structural protein | head and packaging | -1 | 46627 | 48573 |
| AGC31508.1 | KC206276_p79 | hypothetical protein | phrog_12606 | unknown function | unknown function | 1 | 70161 | 70499 |
| AGC31557.1 | KC206276_p48 | DNS protein | phrog_2135 | DNA primase | DNA, RNA and nucleotide metabolism | 1 | 28013 | 30163 |
| AGC31523.1 | KC206276_p14 | hypothetical protein | phrog_2072 | unknown function | unknown function | 1 | 3921 | 4271 |
| AGC31571.1 | KC206276_p62 | major coat protein | phrog_1357 | major head protein | head and packaging | -1 | 53324 | 54526 |
| AGC31563.1 | KC206276_p54 | hypothetical protein | phrog_322 | unknown function | unknown function | 1 | 34944 | 35324 |
| AGC31553.1 | KC206276_p44 | hypothetical protein | phrog_9919 | unknown function | unknown function | 1 | 25519 | 25995 |
| AGC31559.1 | KC206276_p50 | ssDNA-binding protein | phrog_743 | single strand DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 31012 | 31815 |
| AGC31526.1 | KC206276_p17 | RNA polymerase subunit A | phrog_2051 | RNA polymerase | DNA, RNA and nucleotide metabolism | 1 | 5463 | 6680 |
| AGC31515.1 | KC206276_p6 | hypothetical protein | phrog_5407 | unknown function | unknown function | 1 | 1851 | 2039 |
| AGC31554.1 | KC206276_p45 | HNH homing endonuclease | phrog_99 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 26169 | 26561 |
| AGC31539.1 | KC206276_p30 | hypothetical protein | phrog_9867 | unknown function | unknown function | 1 | 12850 | 13293 |
| AGC31511.1 | KC206276_p2 | hypothetical protein | phrog_26357 | unknown function | unknown function | 1 | 601 | 747 |
| AGC31533.1 | KC206276_p24 | hypothetical protein | phrog_1297 | ATPase | other | 1 | 9133 | 10185 |
| AGC31530.1 | KC206276_p21 | hypothetical protein | phrog_18793 | unknown function | unknown function | 1 | 8377 | 8586 |
| AGC31552.1 | KC206276_p43 | hypothetical protein | phrog_5974 | unknown function | unknown function | 1 | 25214 | 25519 |
| AGC31555.1 | KC206276_p46 | hypothetical protein | phrog_2139 | exonuclease | DNA, RNA and nucleotide metabolism | 1 | 26558 | 27535 |
| AGC31540.1 | KC206276_p31 | thymidilate synthase | phrog_85 | thymidylate synthase | DNA, RNA and nucleotide metabolism | 1 | 13293 | 14237 |
| AGC31562.1 | KC206276_p53 | hypothetical protein | singleton | unknown function | unknown function | 1 | 32865 | 32981 |
| AGC31500.1 | KC206276_p71 | tail fiber protein | phrog_12242 | tail protein | tail | -1 | 62725 | 65511 |
| AGC31569.1 | KC206276_p60 | tail protein | phrog_2050 | virion structural protein | head and packaging | -1 | 51705 | 52541 |
| AGC31551.1 | KC206276_p42 | DNA polymerase | phrog_17 | DNA polymerase | DNA, RNA and nucleotide metabolism | 1 | 22638 | 25217 |
| AGC31576.1 | KC206276_p67 | N-acetylmuramidase | phrog_315 | endolysin | lysis | -1 | 58901 | 59536 |
| AGC31541.1 | KC206276_p32 | hypothetical protein | phrog_12633 | unknown function | unknown function | 1 | 14234 | 14473 |