Genomic map of Escherichia phage EC1-UPM (KC206276)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
KC206276
Definition
Escherichia phage EC1-UPM, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae; Gamaleyavirus; Escherichia virus EC1UPM.
DB of origin
PVOG
Length
70912
Host Name
Escherichia coli
Host domain
Bacteria
Is prophage?
undef
Number of proteins
80
%GC
42.88
Number of singletons
2
Number of paralogs
1

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
AGC31564.1 KC206276_p55 hypothetical protein phrog_9565 unknown function unknown function 1 35449 35649
AGC31577.1 KC206276_p68 holin protein phrog_1356 holin lysis -1 59526 59786
AGC31542.1 KC206276_p33 hypothetical protein singleton unknown function unknown function 1 14648 14746
AGC31501.1 KC206276_p72 tail protein phrog_2125 virion structural protein head and packaging -1 65508 66218
AGC31561.1 KC206276_p52 hypothetical protein phrog_7641 unknown function unknown function 1 32371 32811
AGC31568.1 KC206276_p59 hypothetical protein phrog_2220 unknown function unknown function -1 49049 51703
AGC31543.1 KC206276_p34 hypothetical protein phrog_9004 unknown function unknown function 1 14739 15068
AGC31520.1 KC206276_p11 hypothetical protein phrog_289 GTP-binding domain other 1 2990 3346
AGC31560.1 KC206276_p51 hypothetical protein phrog_159 RuvC-like Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 31815 32369
AGC31502.1 KC206276_p73 terminase subunit A phrog_38 terminase large subunit head and packaging -1 66225 67814
AGC31524.1 KC206276_p15 hypothetical protein phrog_14487 unknown function unknown function 1 4274 4534
AGC31546.1 KC206276_p37 rIIB-like protein phrog_2886 RIIB lysis inhibitor lysis 1 17852 19909
AGC31531.1 KC206276_p22 hypothetical protein phrog_7665 unknown function unknown function 1 8583 8768
AGC31510.1 KC206276_p1 hypothetical protein phrog_5020 unknown function unknown function 1 190 513
AGC31579.1 KC206276_p70 hypothetical protein phrog_4217 tail protein tail -1 60327 62441
AGC31558.1 KC206276_p49 hypothetical protein phrog_124 Sak4-like ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 30220 30972
AGC31505.1 KC206276_p76 hypothetical protein phrog_9160 unknown function unknown function 1 69159 69557
AGC31518.1 KC206276_p9 hypothetical protein phrog_10124 unknown function unknown function 1 2526 2759
AGC31507.1 KC206276_p78 hypothetical protein phrog_12099 unknown function unknown function 1 69841 70164
AGC31506.1 KC206276_p77 hypothetical protein phrog_11661 unknown function unknown function 1 69523 69837
AGC31516.1 KC206276_p7 hypothetical protein phrog_7648 unknown function unknown function 1 2018 2146
AGC31567.1 KC206276_p58 structural protein phrog_2646 unknown function unknown function -1 48586 49035
AGC31537.1 KC206276_p28 membrane immunity protein phrog_1039 immunity to superinfection moron, auxiliary metabolic gene and host takeover 1 12110 12352
AGC31521.1 KC206276_p12 hypothetical protein phrog_1972 unknown function unknown function 1 3347 3601
AGC31544.1 KC206276_p35 hypothetical protein phrog_7471 unknown function unknown function 1 15061 15252
AGC31528.1 KC206276_p19 hypothetical protein phrog_7508 unknown function unknown function 1 7935 8123
AGC31522.1 KC206276_p13 hypothetical protein phrog_7827 unknown function unknown function 1 3598 3918
AGC31545.1 KC206276_p36 rIIA-like protein phrog_2979 RIIA lysis inhibitor lysis 1 15280 17847
AGC31578.1 KC206276_p69 hypothetical protein phrog_5211 unknown function unknown function -1 59771 60055
AGC31573.1 KC206276_p64 hypothetical protein phrog_2346 unknown function unknown function -1 55783 56127
AGC31549.1 KC206276_p40 DNA helicase phrog_325 Dda-like helicase DNA, RNA and nucleotide metabolism 1 20777 22087
AGC31572.1 KC206276_p63 hypothetical protein phrog_2120 tail length tape measure protein tail -1 54543 55763
AGC31536.1 KC206276_p27 hypothetical protein phrog_7594 unknown function unknown function 1 11827 12036
AGC31517.1 KC206276_p8 hypothetical protein phrog_464 unknown function unknown function 1 2225 2542
AGC31529.1 KC206276_p20 hypothetical protein phrog_19185 unknown function unknown function 1 8120 8380
AGC31547.1 KC206276_p38 hypothetical protein phrog_6377 unknown function unknown function 1 19972 20367
AGC31519.1 KC206276_p10 hypothetical protein phrog_6887 unknown function unknown function 1 2772 2993
AGC31532.1 KC206276_p23 hypothetical protein phrog_11132 unknown function unknown function 1 8769 9098
AGC31527.1 KC206276_p18 capsid decorating protein phrog_2973 Hoc-like head decoration head and packaging 1 6996 7829
AGC31556.1 KC206276_p47 pathogenesis-related transcriptional factor and ERF protein phrog_99 HNH endonuclease DNA, RNA and nucleotide metabolism 1 27532 28020
AGC31534.1 KC206276_p25 hypothetical protein phrog_1314 HNH endonuclease DNA, RNA and nucleotide metabolism 1 10193 11368
AGC31509.1 KC206276_p80 hypothetical protein phrog_16338 unknown function unknown function 1 70486 70812
AGC31512.1 KC206276_p3 hypothetical protein phrog_20790 unknown function unknown function 1 802 1017
AGC31570.1 KC206276_p61 hypothetical protein phrog_2130 unknown function unknown function -1 52618 53250
AGC31503.1 KC206276_p74 hypothetical protein phrog_2109 unknown function unknown function -1 67807 68496
AGC31525.1 KC206276_p16 RNA polymerase subunit B phrog_2166 N4-like RNA polymerase DNA, RNA and nucleotide metabolism 1 4588 5406
AGC31574.1 KC206276_p65 portal protein phrog_1216 portal protein head and packaging -1 56141 58411
AGC31575.1 KC206276_p66 Rz/RzI spanin protein phrog_6197 Rz-like spanin lysis -1 58414 58920
AGC31565.1 KC206276_p56 virion RNA polymerase phrog_2206 virion RNA polymerase DNA, RNA and nucleotide metabolism -1 35685 46523
AGC31513.1 KC206276_p4 RNA polymerase RNAP1 subunit A phrog_4099 unknown function unknown function 1 1145 1525
AGC31548.1 KC206276_p39 hypothetical protein phrog_671 nucleotide pyrophosphohydrolase other 1 20414 20743
AGC31504.1 KC206276_p75 hypothetical protein phrog_7213 unknown function unknown function 1 68680 68958
AGC31535.1 KC206276_p26 dCTP deaminase phrog_1663 dCTP deaminase DNA, RNA and nucleotide metabolism 1 11365 11817
AGC31538.1 KC206276_p29 hypothetical protein phrog_12812 unknown function unknown function 1 12470 12850
AGC31550.1 KC206276_p41 hypothetical protein phrog_4881 unknown function unknown function 1 22098 22628
AGC31514.1 KC206276_p5 hypothetical protein phrog_13158 unknown function unknown function 1 1666 1854
AGC31566.1 KC206276_p57 structural protein phrog_6126 virion structural protein head and packaging -1 46627 48573
AGC31508.1 KC206276_p79 hypothetical protein phrog_12606 unknown function unknown function 1 70161 70499
AGC31557.1 KC206276_p48 DNS protein phrog_2135 DNA primase DNA, RNA and nucleotide metabolism 1 28013 30163
AGC31523.1 KC206276_p14 hypothetical protein phrog_2072 unknown function unknown function 1 3921 4271
AGC31571.1 KC206276_p62 major coat protein phrog_1357 major head protein head and packaging -1 53324 54526
AGC31563.1 KC206276_p54 hypothetical protein phrog_322 unknown function unknown function 1 34944 35324
AGC31553.1 KC206276_p44 hypothetical protein phrog_9919 unknown function unknown function 1 25519 25995
AGC31559.1 KC206276_p50 ssDNA-binding protein phrog_743 single strand DNA binding protein DNA, RNA and nucleotide metabolism 1 31012 31815
AGC31526.1 KC206276_p17 RNA polymerase subunit A phrog_2051 RNA polymerase DNA, RNA and nucleotide metabolism 1 5463 6680
AGC31515.1 KC206276_p6 hypothetical protein phrog_5407 unknown function unknown function 1 1851 2039
AGC31554.1 KC206276_p45 HNH homing endonuclease phrog_99 HNH endonuclease DNA, RNA and nucleotide metabolism 1 26169 26561
AGC31539.1 KC206276_p30 hypothetical protein phrog_9867 unknown function unknown function 1 12850 13293
AGC31511.1 KC206276_p2 hypothetical protein phrog_26357 unknown function unknown function 1 601 747
AGC31533.1 KC206276_p24 hypothetical protein phrog_1297 ATPase other 1 9133 10185
AGC31530.1 KC206276_p21 hypothetical protein phrog_18793 unknown function unknown function 1 8377 8586
AGC31552.1 KC206276_p43 hypothetical protein phrog_5974 unknown function unknown function 1 25214 25519
AGC31555.1 KC206276_p46 hypothetical protein phrog_2139 exonuclease DNA, RNA and nucleotide metabolism 1 26558 27535
AGC31540.1 KC206276_p31 thymidilate synthase phrog_85 thymidylate synthase DNA, RNA and nucleotide metabolism 1 13293 14237
AGC31562.1 KC206276_p53 hypothetical protein singleton unknown function unknown function 1 32865 32981
AGC31500.1 KC206276_p71 tail fiber protein phrog_12242 tail protein tail -1 62725 65511
AGC31569.1 KC206276_p60 tail protein phrog_2050 virion structural protein head and packaging -1 51705 52541
AGC31551.1 KC206276_p42 DNA polymerase phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism 1 22638 25217
AGC31576.1 KC206276_p67 N-acetylmuramidase phrog_315 endolysin lysis -1 58901 59536
AGC31541.1 KC206276_p32 hypothetical protein phrog_12633 unknown function unknown function 1 14234 14473