| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
KC262634 |
Definition |
Pseudomonas virus H66, complete genome. |
Molecule type |
DNA |
Genome structure |
circular |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae; Hollowayvirus. |
DB of origin |
PVOG |
Length |
65270 |
Host Name |
Pseudomonas aeruginosa |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
71 |
%GC |
62.62 |
Number of singletons |
7 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| AGC34659.1 | KC262634_p50 | hypothetical protein | phrog_644 | unknown function | unknown function | 1 | 33299 | 33706 |
| AGC34677.1 | KC262634_p68 | hypothetical protein | phrog_87 | metallo-protease | other | -1 | 62260 | 62742 |
| AGC34627.1 | KC262634_p18 | DNA polymerase associated exonuclease | phrog_192 | DNA polymerase exonuclease subunit | DNA, RNA and nucleotide metabolism | -1 | 12243 | 12848 |
| AGC34660.1 | KC262634_p51 | hypothetical protein | phrog_11163 | unknown function | unknown function | 1 | 33730 | 34155 |
| AGC34655.1 | KC262634_p46 | structural protein | phrog_8260 | virion structural protein | head and packaging | 1 | 30980 | 31504 |
| AGC34673.1 | KC262634_p64 | structural protein | phrog_1954 | virion structural protein | head and packaging | 1 | 60407 | 61000 |
| AGC34652.1 | KC262634_p43 | hypothetical protein | phrog_26238 | unknown function | unknown function | 1 | 27470 | 28369 |
| AGC34678.1 | KC262634_p69 | transcriptional regulator | phrog_8 | transcriptional regulator | transcription regulation | -1 | 62732 | 63109 |
| AGC34676.1 | KC262634_p67 | hypothetical protein | singleton | unknown function | unknown function | -1 | 61954 | 62064 |
| AGC34674.1 | KC262634_p65 | hypothetical protein | phrog_22880 | unknown function | unknown function | 1 | 61012 | 61428 |
| AGC34622.1 | KC262634_p13 | site-specific DNA methylase | phrog_116 | DNA methyltransferase | other | -1 | 7234 | 8910 |
| AGC34654.1 | KC262634_p45 | structural protein | phrog_334 | major head protein | head and packaging | 1 | 29674 | 30966 |
| AGC34639.1 | KC262634_p30 | hypothetical protein | singleton | unknown function | unknown function | -1 | 17353 | 17562 |
| AGC34624.1 | KC262634_p15 | nucleoid-associated protein | phrog_3767 | nucleoid associated protein | DNA, RNA and nucleotide metabolism | -1 | 9713 | 10768 |
| AGC34657.1 | KC262634_p48 | structural protein | phrog_399 | structural protein | head and packaging | 1 | 32438 | 33115 |
| AGC34611.1 | KC262634_p2 | hypothetical protein | phrog_7614 | unknown function | unknown function | -1 | 361 | 747 |
| AGC34647.1 | KC262634_p38 | NinG family protein | phrog_171 | NinG/ Rap DNA junction specific endonuclease | DNA, RNA and nucleotide metabolism | 1 | 21978 | 22592 |
| AGC34615.1 | KC262634_p6 | hypothetical protein | singleton | unknown function | unknown function | 1 | 2831 | 3094 |
| AGC34629.1 | KC262634_p20 | hypothetical protein | phrog_16469 | unknown function | unknown function | -1 | 13276 | 14283 |
| AGC34620.1 | KC262634_p11 | hypothetical protein | phrog_3190 | unknown function | unknown function | -1 | 6190 | 6552 |
| AGC34675.1 | KC262634_p66 | hypothetical protein | phrog_3944 | unknown function | unknown function | 1 | 61600 | 61866 |
| AGC34680.1 | KC262634_p71 | integrase | phrog_1 | integrase | integration and excision | 1 | 64155 | 65261 |
| AGC34626.1 | KC262634_p17 | single-stranded DNA-binding protein | phrog_44 | single strand DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 11742 | 12239 |
| AGC34638.1 | KC262634_p29 | hypothetical protein | phrog_9165 | unknown function | unknown function | -1 | 17087 | 17299 |
| AGC34616.1 | KC262634_p7 | hypothetical protein | phrog_30306 | unknown function | unknown function | 1 | 3485 | 4555 |
| AGC34658.1 | KC262634_p49 | hypothetical protein | phrog_8397 | CsrA-like regulator | transcription regulation | 1 | 33112 | 33318 |
| AGC34664.1 | KC262634_p55 | hypothetical protein | phrog_8123 | unknown function | unknown function | 1 | 39236 | 39826 |
| AGC34634.1 | KC262634_p25 | hypothetical protein | phrog_6033 | unknown function | unknown function | -1 | 15682 | 15873 |
| AGC34640.1 | KC262634_p31 | hypothetical protein | phrog_15496 | unknown function | unknown function | -1 | 17605 | 17778 |
| AGC34617.1 | KC262634_p8 | hypothetical protein | singleton | unknown function | unknown function | -1 | 4663 | 4803 |
| AGC34667.1 | KC262634_p58 | hypothetical protein | phrog_10969 | unknown function | unknown function | 1 | 43584 | 45476 |
| AGC34648.1 | KC262634_p39 | hypothetical protein | phrog_8117 | unknown function | unknown function | 1 | 22671 | 23162 |
| AGC34633.1 | KC262634_p24 | hypothetical protein | phrog_17194 | unknown function | unknown function | -1 | 15314 | 15685 |
| AGC34610.1 | KC262634_p1 | transcriptional regulator | phrog_1300 | excisionase | integration and excision | -1 | 1 | 285 |
| AGC34666.1 | KC262634_p57 | hypothetical protein | phrog_12240 | unknown function | unknown function | 1 | 42421 | 43584 |
| AGC34619.1 | KC262634_p10 | host nuclease inhibitor protein | singleton | unknown function | unknown function | -1 | 5183 | 5845 |
| AGC34613.1 | KC262634_p4 | hypothetical protein | phrog_9434 | unknown function | unknown function | -1 | 859 | 2040 |
| AGC34645.1 | KC262634_p36 | hypothetical protein | phrog_6028 | unknown function | unknown function | 1 | 20577 | 21434 |
| AGC34672.1 | KC262634_p63 | hypothetical protein | phrog_13 | Rz-like spanin | lysis | 1 | 59875 | 60396 |
| AGC34661.1 | KC262634_p52 | structural protein | phrog_14189 | unknown function | unknown function | 1 | 34155 | 35012 |
| AGC34653.1 | KC262634_p44 | hypothetical protein | phrog_479 | unknown function | unknown function | 1 | 28531 | 29661 |
| AGC34623.1 | KC262634_p14 | LexA-like protein | phrog_3502 | unknown function | unknown function | -1 | 9507 | 9716 |
| AGC34665.1 | KC262634_p56 | hypothetical protein | phrog_11362 | unknown function | unknown function | 1 | 39831 | 42428 |
| AGC34625.1 | KC262634_p16 | recombination associated protein | phrog_724 | exonuclease recombination-associated | DNA, RNA and nucleotide metabolism | -1 | 10795 | 11715 |
| AGC34663.1 | KC262634_p54 | structural protein | phrog_8040 | head closure Hc3 | connector | 1 | 37978 | 39168 |
| AGC34643.1 | KC262634_p34 | Cro-like protein | phrog_35 | transcriptional repressor | transcription regulation | 1 | 19372 | 19572 |
| AGC34628.1 | KC262634_p19 | hypothetical protein | singleton | unknown function | unknown function | -1 | 12961 | 13272 |
| AGC34650.1 | KC262634_p41 | terminase large subunit | phrog_2 | terminase large subunit | head and packaging | 1 | 23776 | 25059 |
| AGC34618.1 | KC262634_p9 | hypothetical protein | phrog_355 | nucleoside 2-deoxyribosyltransferase | DNA, RNA and nucleotide metabolism | -1 | 4863 | 5186 |
| AGC34631.1 | KC262634_p22 | hypothetical protein | phrog_5864 | unknown function | unknown function | -1 | 15049 | 15201 |
| AGC34669.1 | KC262634_p60 | structural protein | phrog_11358 | unknown function | unknown function | 1 | 47645 | 59008 |
| AGC34642.1 | KC262634_p33 | transcriptional regulator | phrog_4 | transcriptional repressor | transcription regulation | -1 | 18467 | 19270 |
| AGC34670.1 | KC262634_p61 | holin | phrog_4237 | holin | lysis | 1 | 59076 | 59360 |
| AGC34635.1 | KC262634_p26 | hypothetical protein | phrog_6125 | unknown function | unknown function | -1 | 15887 | 16036 |
| AGC34668.1 | KC262634_p59 | hypothetical protein | phrog_11341 | unknown function | unknown function | 1 | 45558 | 47645 |
| AGC34614.1 | KC262634_p5 | hypothetical protein | phrog_14805 | unknown function | unknown function | -1 | 2090 | 2596 |
| AGC34644.1 | KC262634_p35 | hypothetical protein | phrog_11527 | unknown function | unknown function | 1 | 19574 | 20590 |
| AGC34649.1 | KC262634_p40 | terminase small subunit | phrog_1482 | terminase small subunit | head and packaging | 1 | 23213 | 23779 |
| AGC34637.1 | KC262634_p28 | carbon-storage-related regulatory protein | phrog_5527 | transcriptional regulator | transcription regulation | -1 | 16681 | 17052 |
| AGC34636.1 | KC262634_p27 | hypothetical protein | phrog_1934 | unknown function | unknown function | -1 | 16033 | 16563 |
| AGC34646.1 | KC262634_p37 | hypothetical protein | phrog_319 | NinB/ Orf homologous recombination mediator | DNA, RNA and nucleotide metabolism | 1 | 21427 | 21978 |
| AGC34651.1 | KC262634_p42 | portal protein | phrog_156 | portal protein | head and packaging | 1 | 25069 | 27393 |
| AGC34671.1 | KC262634_p62 | endolysin | phrog_7 | endolysin | lysis | 1 | 59344 | 59871 |
| AGC34630.1 | KC262634_p21 | DNA repair protein | phrog_7838 | exonuclease | DNA, RNA and nucleotide metabolism | -1 | 14288 | 15052 |
| AGC34656.1 | KC262634_p47 | hypothetical protein | phrog_11782 | unknown function | unknown function | 1 | 31569 | 32441 |
| AGC34612.1 | KC262634_p3 | hypothetical protein | phrog_3765 | unknown function | unknown function | -1 | 744 | 866 |
| AGC34641.1 | KC262634_p32 | hypothetical protein | phrog_2707 | unknown function | unknown function | 1 | 18164 | 18430 |
| AGC34621.1 | KC262634_p12 | hypothetical protein | singleton | unknown function | unknown function | 1 | 6806 | 7219 |
| AGC34662.1 | KC262634_p53 | hypothetical protein | phrog_11272 | unknown function | unknown function | 1 | 35015 | 37978 |
| AGC34679.1 | KC262634_p70 | hypothetical protein | phrog_8717 | unknown function | unknown function | -1 | 63235 | 63750 |
| AGC34632.1 | KC262634_p23 | hypothetical protein | phrog_19766 | unknown function | unknown function | -1 | 15198 | 15317 |