Genomic map of Pseudomonas virus H66 (KC262634)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
KC262634
Definition
Pseudomonas virus H66, complete genome.
Molecule type
DNA
Genome structure
circular
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae; Hollowayvirus.
DB of origin
PVOG
Length
65270
Host Name
Pseudomonas aeruginosa
Host domain
Bacteria
Is prophage?
undef
Number of proteins
71
%GC
62.62
Number of singletons
7
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
AGC34659.1 KC262634_p50 hypothetical protein phrog_644 unknown function unknown function 1 33299 33706
AGC34677.1 KC262634_p68 hypothetical protein phrog_87 metallo-protease other -1 62260 62742
AGC34627.1 KC262634_p18 DNA polymerase associated exonuclease phrog_192 DNA polymerase exonuclease subunit DNA, RNA and nucleotide metabolism -1 12243 12848
AGC34660.1 KC262634_p51 hypothetical protein phrog_11163 unknown function unknown function 1 33730 34155
AGC34655.1 KC262634_p46 structural protein phrog_8260 virion structural protein head and packaging 1 30980 31504
AGC34673.1 KC262634_p64 structural protein phrog_1954 virion structural protein head and packaging 1 60407 61000
AGC34652.1 KC262634_p43 hypothetical protein phrog_26238 unknown function unknown function 1 27470 28369
AGC34678.1 KC262634_p69 transcriptional regulator phrog_8 transcriptional regulator transcription regulation -1 62732 63109
AGC34676.1 KC262634_p67 hypothetical protein singleton unknown function unknown function -1 61954 62064
AGC34674.1 KC262634_p65 hypothetical protein phrog_22880 unknown function unknown function 1 61012 61428
AGC34622.1 KC262634_p13 site-specific DNA methylase phrog_116 DNA methyltransferase other -1 7234 8910
AGC34654.1 KC262634_p45 structural protein phrog_334 major head protein head and packaging 1 29674 30966
AGC34639.1 KC262634_p30 hypothetical protein singleton unknown function unknown function -1 17353 17562
AGC34624.1 KC262634_p15 nucleoid-associated protein phrog_3767 nucleoid associated protein DNA, RNA and nucleotide metabolism -1 9713 10768
AGC34657.1 KC262634_p48 structural protein phrog_399 structural protein head and packaging 1 32438 33115
AGC34611.1 KC262634_p2 hypothetical protein phrog_7614 unknown function unknown function -1 361 747
AGC34647.1 KC262634_p38 NinG family protein phrog_171 NinG/ Rap DNA junction specific endonuclease DNA, RNA and nucleotide metabolism 1 21978 22592
AGC34615.1 KC262634_p6 hypothetical protein singleton unknown function unknown function 1 2831 3094
AGC34629.1 KC262634_p20 hypothetical protein phrog_16469 unknown function unknown function -1 13276 14283
AGC34620.1 KC262634_p11 hypothetical protein phrog_3190 unknown function unknown function -1 6190 6552
AGC34675.1 KC262634_p66 hypothetical protein phrog_3944 unknown function unknown function 1 61600 61866
AGC34680.1 KC262634_p71 integrase phrog_1 integrase integration and excision 1 64155 65261
AGC34626.1 KC262634_p17 single-stranded DNA-binding protein phrog_44 single strand DNA binding protein DNA, RNA and nucleotide metabolism -1 11742 12239
AGC34638.1 KC262634_p29 hypothetical protein phrog_9165 unknown function unknown function -1 17087 17299
AGC34616.1 KC262634_p7 hypothetical protein phrog_30306 unknown function unknown function 1 3485 4555
AGC34658.1 KC262634_p49 hypothetical protein phrog_8397 CsrA-like regulator transcription regulation 1 33112 33318
AGC34664.1 KC262634_p55 hypothetical protein phrog_8123 unknown function unknown function 1 39236 39826
AGC34634.1 KC262634_p25 hypothetical protein phrog_6033 unknown function unknown function -1 15682 15873
AGC34640.1 KC262634_p31 hypothetical protein phrog_15496 unknown function unknown function -1 17605 17778
AGC34617.1 KC262634_p8 hypothetical protein singleton unknown function unknown function -1 4663 4803
AGC34667.1 KC262634_p58 hypothetical protein phrog_10969 unknown function unknown function 1 43584 45476
AGC34648.1 KC262634_p39 hypothetical protein phrog_8117 unknown function unknown function 1 22671 23162
AGC34633.1 KC262634_p24 hypothetical protein phrog_17194 unknown function unknown function -1 15314 15685
AGC34610.1 KC262634_p1 transcriptional regulator phrog_1300 excisionase integration and excision -1 1 285
AGC34666.1 KC262634_p57 hypothetical protein phrog_12240 unknown function unknown function 1 42421 43584
AGC34619.1 KC262634_p10 host nuclease inhibitor protein singleton unknown function unknown function -1 5183 5845
AGC34613.1 KC262634_p4 hypothetical protein phrog_9434 unknown function unknown function -1 859 2040
AGC34645.1 KC262634_p36 hypothetical protein phrog_6028 unknown function unknown function 1 20577 21434
AGC34672.1 KC262634_p63 hypothetical protein phrog_13 Rz-like spanin lysis 1 59875 60396
AGC34661.1 KC262634_p52 structural protein phrog_14189 unknown function unknown function 1 34155 35012
AGC34653.1 KC262634_p44 hypothetical protein phrog_479 unknown function unknown function 1 28531 29661
AGC34623.1 KC262634_p14 LexA-like protein phrog_3502 unknown function unknown function -1 9507 9716
AGC34665.1 KC262634_p56 hypothetical protein phrog_11362 unknown function unknown function 1 39831 42428
AGC34625.1 KC262634_p16 recombination associated protein phrog_724 exonuclease recombination-associated DNA, RNA and nucleotide metabolism -1 10795 11715
AGC34663.1 KC262634_p54 structural protein phrog_8040 head closure Hc3 connector 1 37978 39168
AGC34643.1 KC262634_p34 Cro-like protein phrog_35 transcriptional repressor transcription regulation 1 19372 19572
AGC34628.1 KC262634_p19 hypothetical protein singleton unknown function unknown function -1 12961 13272
AGC34650.1 KC262634_p41 terminase large subunit phrog_2 terminase large subunit head and packaging 1 23776 25059
AGC34618.1 KC262634_p9 hypothetical protein phrog_355 nucleoside 2-deoxyribosyltransferase DNA, RNA and nucleotide metabolism -1 4863 5186
AGC34631.1 KC262634_p22 hypothetical protein phrog_5864 unknown function unknown function -1 15049 15201
AGC34669.1 KC262634_p60 structural protein phrog_11358 unknown function unknown function 1 47645 59008
AGC34642.1 KC262634_p33 transcriptional regulator phrog_4 transcriptional repressor transcription regulation -1 18467 19270
AGC34670.1 KC262634_p61 holin phrog_4237 holin lysis 1 59076 59360
AGC34635.1 KC262634_p26 hypothetical protein phrog_6125 unknown function unknown function -1 15887 16036
AGC34668.1 KC262634_p59 hypothetical protein phrog_11341 unknown function unknown function 1 45558 47645
AGC34614.1 KC262634_p5 hypothetical protein phrog_14805 unknown function unknown function -1 2090 2596
AGC34644.1 KC262634_p35 hypothetical protein phrog_11527 unknown function unknown function 1 19574 20590
AGC34649.1 KC262634_p40 terminase small subunit phrog_1482 terminase small subunit head and packaging 1 23213 23779
AGC34637.1 KC262634_p28 carbon-storage-related regulatory protein phrog_5527 transcriptional regulator transcription regulation -1 16681 17052
AGC34636.1 KC262634_p27 hypothetical protein phrog_1934 unknown function unknown function -1 16033 16563
AGC34646.1 KC262634_p37 hypothetical protein phrog_319 NinB/ Orf homologous recombination mediator DNA, RNA and nucleotide metabolism 1 21427 21978
AGC34651.1 KC262634_p42 portal protein phrog_156 portal protein head and packaging 1 25069 27393
AGC34671.1 KC262634_p62 endolysin phrog_7 endolysin lysis 1 59344 59871
AGC34630.1 KC262634_p21 DNA repair protein phrog_7838 exonuclease DNA, RNA and nucleotide metabolism -1 14288 15052
AGC34656.1 KC262634_p47 hypothetical protein phrog_11782 unknown function unknown function 1 31569 32441
AGC34612.1 KC262634_p3 hypothetical protein phrog_3765 unknown function unknown function -1 744 866
AGC34641.1 KC262634_p32 hypothetical protein phrog_2707 unknown function unknown function 1 18164 18430
AGC34621.1 KC262634_p12 hypothetical protein singleton unknown function unknown function 1 6806 7219
AGC34662.1 KC262634_p53 hypothetical protein phrog_11272 unknown function unknown function 1 35015 37978
AGC34679.1 KC262634_p70 hypothetical protein phrog_8717 unknown function unknown function -1 63235 63750
AGC34632.1 KC262634_p23 hypothetical protein phrog_19766 unknown function unknown function -1 15198 15317