Genomic map of Enterobacteria phage phiJLA23 (KC333879)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
KC333879
Definition
Enterobacteria phage phiJLA23, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Drexlerviridae; Rogunavirinae; Rogunavirus; Escherichia virus phiJLA23.
DB of origin
PVOG
Length
43017
Host Name
Escherichia coli
Host domain
Bacteria
Is prophage?
undef
Number of proteins
65
%GC
44.18
Number of singletons
4
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
AGC35342.1 KC333879_p12 hypothetical protein phrog_179 tail terminator connector -1 12007 12393
AGC35346.1 KC333879_p16 hypothetical protein phrog_2716 unknown function unknown function -1 13627 13872
AGC35381.1 KC333879_p51 hypothetical protein phrog_2180 unknown function unknown function -1 31485 31610
AGC35393.1 KC333879_p63 exodeoxyribonuclease phrog_412 exonuclease VIII DNA, RNA and nucleotide metabolism -1 40426 41394
AGC35353.1 KC333879_p23 terminase large subunit phrog_38 terminase large subunit head and packaging -1 19670 21238
AGC35365.1 KC333879_p35 hypothetical protein phrog_4448 unknown function unknown function 1 25238 25477
AGC35370.1 KC333879_p40 hypothetical protein phrog_2373 DNA helicase DNA, RNA and nucleotide metabolism 1 26752 28341
AGC35350.1 KC333879_p20 hypothetical protein phrog_530 head maturation protease head and packaging -1 16396 17505
AGC35369.1 KC333879_p39 hypothetical protein phrog_8121 unknown function unknown function 1 26538 26717
AGC35335.1 KC333879_p5 hypothetical protein phrog_30 minor tail protein tail -1 5607 6353
AGC35375.1 KC333879_p45 hypothetical protein phrog_4788 unknown function unknown function -1 29891 30064
AGC35345.1 KC333879_p15 hypothetical protein phrog_302 virion structural protein head and packaging -1 13181 13582
AGC35337.1 KC333879_p7 minor tail protein phrog_14 minor tail protein tail -1 7167 7517
AGC35363.1 KC333879_p33 hypothetical protein phrog_7327 unknown function unknown function -1 24414 24974
AGC35394.1 KC333879_p64 hypothetical protein phrog_5247 unknown function unknown function -1 41398 41592
AGC35367.1 KC333879_p37 hypothetical protein phrog_2684 unknown function unknown function 1 25703 26062
AGC35364.1 KC333879_p34 hypothetical protein singleton unknown function unknown function -1 24974 25048
AGC35351.1 KC333879_p21 head morphogenesis protein phrog_324 head morphogenesis head and packaging -1 17495 18238
AGC35390.1 KC333879_p60 tail fiber phrog_4818 tail fiber protein tail 1 36503 39220
AGC35339.1 KC333879_p9 hypothetical protein phrog_680 tail length tape measure protein tail -1 10637 10891
AGC35334.1 KC333879_p4 tail assembly protein phrog_32 tail assembly protein tail -1 5060 5626
AGC35359.1 KC333879_p29 hypothetical protein phrog_11452 unknown function unknown function -1 22970 23263
AGC35391.1 KC333879_p61 hypothetical protein phrog_44 single strand DNA binding protein DNA, RNA and nucleotide metabolism -1 39252 39680
AGC35336.1 KC333879_p6 hypothetical protein phrog_18 minor tail protein tail -1 6363 7127
AGC35366.1 KC333879_p36 hypothetical protein phrog_4548 unknown function unknown function 1 25478 25630
AGC35379.1 KC333879_p49 hypothetical protein phrog_4596 unknown function unknown function -1 30995 31252
AGC35358.1 KC333879_p28 hypothetical protein phrog_3955 unknown function unknown function -1 22832 22966
AGC35388.1 KC333879_p58 transcriptional regulator phrog_2856 transcriptional regulator transcription regulation 1 34975 35448
AGC35352.1 KC333879_p22 portal protein phrog_146 portal protein head and packaging -1 18219 19493
AGC35348.1 KC333879_p18 DNA polymerase I phrog_22681 DNA polymerase DNA, RNA and nucleotide metabolism -1 15326 15823
AGC35380.1 KC333879_p50 hypothetical protein phrog_2817 unknown function unknown function -1 31249 31488
AGC35383.1 KC333879_p53 hypothetical protein singleton unknown function unknown function 1 31948 32049
AGC35382.1 KC333879_p52 minor capsid protein singleton unknown function unknown function -1 31685 31936
AGC35376.1 KC333879_p46 hypothetical protein phrog_10052 unknown function unknown function -1 30077 30265
AGC35389.1 KC333879_p59 alpha replication protein phrog_510 DNA primase DNA, RNA and nucleotide metabolism 1 35501 36424
AGC35392.1 KC333879_p62 recombination protein phrog_155 Erf-like ssDNA annealing protein DNA, RNA and nucleotide metabolism -1 39722 40369
AGC35332.1 KC333879_p2 hypothetical protein phrog_1265 membrane protein moron, auxiliary metabolic gene and host takeover 1 600 1562
AGC35373.1 KC333879_p43 phage-related lysozyme phrog_7 endolysin lysis -1 29169 29564
AGC35395.1 KC333879_p65 hypothetical protein phrog_8235 anti-repressor transcription regulation -1 41666 42079
AGC35349.1 KC333879_p19 hypothetical protein phrog_1989 unknown function unknown function -1 15917 16384
AGC35374.1 KC333879_p44 holin phrog_2877 holin lysis -1 29561 29776
AGC35384.1 KC333879_p54 hypothetical protein phrog_2676 unknown function unknown function -1 32079 32297
AGC35338.1 KC333879_p8 tail length tape measure protein precursor phrog_24 tail length tape measure protein tail -1 7549 10602
AGC35360.1 KC333879_p30 hypothetical protein phrog_1312 unknown function unknown function -1 23260 23388
AGC35377.1 KC333879_p47 hypothetical protein phrog_7411 unknown function unknown function -1 30265 30450
AGC35362.1 KC333879_p32 hypothetical protein phrog_13316 unknown function unknown function -1 24126 24356
AGC35385.1 KC333879_p55 hypothetical protein phrog_6031 unknown function unknown function -1 32297 32491
AGC35343.1 KC333879_p13 hypothetical protein phrog_169 tail completion or Neck1 protein connector -1 12395 12823
AGC35331.1 KC333879_p1 hypothetical protein phrog_4281 unknown function unknown function 1 280 600
AGC35344.1 KC333879_p14 hypothetical protein phrog_161 head closure Hc1 connector -1 12816 13184
AGC35333.1 KC333879_p3 tail fiber phrog_31 central tail fiber J tail -1 1593 5018
AGC35368.1 KC333879_p38 hypothetical protein phrog_11986 unknown function unknown function 1 26273 26455
AGC35347.1 KC333879_p17 hypothetical protein phrog_264 major head protein head and packaging -1 13965 14924
AGC35340.1 KC333879_p10 hypothetical protein phrog_569 tail length tape measure protein tail -1 10954 11268
AGC35371.1 KC333879_p41 hypothetical protein phrog_2794 unknown function unknown function 1 28346 28681
AGC35356.1 KC333879_p26 hypothetical protein phrog_10885 unknown function unknown function -1 22403 22597
AGC35386.1 KC333879_p56 helicase-related protein phrog_824 unknown function unknown function -1 32550 32939
AGC35355.1 KC333879_p25 hypothetical protein phrog_2919 unknown function unknown function -1 21850 21999
AGC35361.1 KC333879_p31 hypothetical protein phrog_8335 unknown function unknown function -1 23842 24075
AGC35372.1 KC333879_p42 hypothetical protein phrog_1804 Rz-like spanin lysis -1 28695 29099
AGC35357.1 KC333879_p27 hypothetical protein phrog_303 unknown function unknown function -1 22590 22829
AGC35341.1 KC333879_p11 hypothetical protein phrog_584 major tail protein tail -1 11342 11992
AGC35354.1 KC333879_p24 terminase small subunit phrog_606 terminase small subunit head and packaging -1 21235 21750
AGC35387.1 KC333879_p57 helicase-related protein phrog_16 DNA helicase DNA, RNA and nucleotide metabolism -1 32939 34933
AGC35378.1 KC333879_p48 hypothetical protein singleton unknown function unknown function -1 30511 30843