Genomic map of Streptococcus phage phi20c (KC348598)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
KC348598
Definition
Streptococcus phage phi20c, complete genome.
Molecule type
DNA
Genome structure
circular
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae.
DB of origin
PVOG
Length
33516
Host Name
Streptococcus suis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
54
%GC
41.71
Number of singletons
4
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
AGF87315.1 KC348598_p25 hypothetical protein phrog_2862 unknown function unknown function -1 18476 18838
AGF87332.1 KC348598_p42 HNH endonuclease phrog_1891 HNH endonuclease DNA, RNA and nucleotide metabolism -1 27342 27938
AGF87302.1 KC348598_p12 major tail protein phrog_117 major tail protein tail -1 10199 10786
AGF87324.1 KC348598_p34 single-strand binding protein phrog_44 single strand DNA binding protein DNA, RNA and nucleotide metabolism -1 23173 23571
AGF87342.1 KC348598_p52 hypothetical protein phrog_10787 unknown function unknown function 1 31134 31562
AGF87303.1 KC348598_p13 hypothetical protein phrog_123 tail terminator connector -1 10802 11137
AGF87293.1 KC348598_p3 phage holin protein phrog_608 holin lysis -1 1356 1706
AGF87294.1 KC348598_p4 hypothetical protein phrog_1625 involved in bacteriocin production or immunity moron, auxiliary metabolic gene and host takeover -1 1709 2008
AGF87322.1 KC348598_p32 virulence-associated protein E phrog_1313 DNA helicase DNA, RNA and nucleotide metabolism -1 20963 22345
AGF87295.1 KC348598_p5 hypothetical protein phrog_1164 unknown function unknown function -1 2012 2356
AGF87296.1 KC348598_p6 hypothetical protein phrog_1137 unknown function unknown function -1 2359 2577
AGF87313.1 KC348598_p23 hypothetical protein phrog_2494 minor head protein head and packaging -1 16001 17221
AGF87309.1 KC348598_p19 hypothetical protein phrog_233 head scaffolding protein head and packaging -1 13204 13665
AGF87343.1 KC348598_p53 hypothetical protein phrog_6701 unknown function unknown function 1 31555 32163
AGF87317.1 KC348598_p27 hypothetical protein phrog_36 transcriptional regulator transcription regulation -1 19371 19805
AGF87338.1 KC348598_p48 hypothetical protein phrog_30904 unknown function unknown function -1 29569 29973
AGF87334.1 KC348598_p44 hypothetical protein phrog_12597 unknown function unknown function -1 28159 28389
AGF87314.1 KC348598_p24 phage portal protein phrog_104 portal protein head and packaging -1 17214 18479
AGF87325.1 KC348598_p35 hypothetical protein phrog_23177 unknown function unknown function -1 23568 23864
AGF87331.1 KC348598_p41 Gp157-like protein phrog_253 Mu Gam-like end protection DNA, RNA and nucleotide metabolism -1 26879 27358
AGF87335.1 KC348598_p45 hypothetical protein singleton unknown function unknown function -1 28382 28666
AGF87307.1 KC348598_p17 hypothetical protein phrog_1539 Arc-like repressor transcription regulation -1 12090 12308
AGF87323.1 KC348598_p33 bifunctional DNA primase/polymerase phrog_695 DNA polymerase/primase DNA, RNA and nucleotide metabolism -1 22335 23162
AGF87304.1 KC348598_p14 hypothetical protein phrog_387 neck protein connector -1 11134 11373
AGF87311.1 KC348598_p21 hypothetical protein phrog_903 unknown function unknown function -1 15463 15735
AGF87321.1 KC348598_p31 hypothetical protein singleton unknown function unknown function 1 20637 20765
AGF87310.1 KC348598_p20 phage terminase phrog_9 terminase large subunit head and packaging -1 13749 15164
AGF87308.1 KC348598_p18 phage capsid protein phrog_10 major head protein head and packaging -1 12310 13200
AGF87291.1 KC348598_p1 hypothetical protein singleton unknown function unknown function -1 33504 33516
AGF87291.1 KC348598_p1 hypothetical protein singleton unknown function unknown function -1 1 86
AGF87344.1 KC348598_p54 integrase protein phrog_1 integrase integration and excision 1 32283 33425
AGF87328.1 KC348598_p38 type III restriction enzyme, res subunit phrog_62 DNA helicase DNA, RNA and nucleotide metabolism -1 24915 26087
AGF87337.1 KC348598_p47 hypothetical protein phrog_633 transcriptional regulator transcription regulation -1 28996 29340
AGF87336.1 KC348598_p46 excisionase phrog_904 excisionase integration and excision -1 28668 28979
AGF87299.1 KC348598_p9 phage tail protein phrog_58 tail length tape measure protein tail -1 6958 9540
AGF87318.1 KC348598_p28 hypothetical protein phrog_4455 unknown function unknown function -1 19878 20126
AGF87301.1 KC348598_p11 hypothetical protein phrog_1526 unknown function unknown function -1 9910 10188
AGF87333.1 KC348598_p43 hypothetical protein phrog_2044 RNA polymerase beta subunit DNA, RNA and nucleotide metabolism -1 27942 28166
AGF87300.1 KC348598_p10 hypothetical protein phrog_1633 unknown function unknown function -1 9530 9913
AGF87312.1 KC348598_p22 hypothetical protein phrog_36787 unknown function unknown function -1 15763 15996
AGF87298.1 KC348598_p8 phage tail protein phrog_33 distal tail protein Dit tail -1 6263 6958
AGF87330.1 KC348598_p40 hypothetical protein phrog_1341 unknown function unknown function -1 26520 26882
AGF87316.1 KC348598_p26 HNH endonuclease phrog_338 HNH endonuclease DNA, RNA and nucleotide metabolism -1 18927 19274
AGF87306.1 KC348598_p16 phage protein Gp19-like protein phrog_137 head-tail adaptor Ad1 connector -1 11691 12086
AGF87297.1 KC348598_p7 gp58-like protein phrog_1330 tail protein tail -1 2586 6281
AGF87339.1 KC348598_p49 transcriptional regulator phrog_3 transcriptional repressor transcription regulation -1 29989 30189
AGF87292.1 KC348598_p2 phage lysin phrog_1309 endolysin lysis -1 653 1372
AGF87340.1 KC348598_p50 transcriptional regulator singleton unknown function unknown function 1 30240 30758
AGF87320.1 KC348598_p30 hypothetical protein phrog_1489 unknown function unknown function -1 20435 20590
AGF87326.1 KC348598_p36 Erf family protein phrog_155 Erf-like ssDNA annealing protein DNA, RNA and nucleotide metabolism -1 23864 24562
AGF87341.1 KC348598_p51 cI-like repressor phrog_87 metallo-protease other 1 30745 31122
AGF87319.1 KC348598_p29 hypothetical protein phrog_884 unknown function unknown function -1 20130 20438
AGF87305.1 KC348598_p15 hypothetical protein phrog_501 head closure Hc1 connector -1 11366 11704
AGF87327.1 KC348598_p37 hypothetical protein phrog_2486 unknown function unknown function -1 24572 24892
AGF87329.1 KC348598_p39 hypothetical protein phrog_1981 unknown function unknown function -1 26056 26520