Genomic map of Streptococcus phage phi5218 (KC348600)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
KC348600
Definition
Streptococcus phage phi5218, complete genome.
Molecule type
DNA
Genome structure
circular
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae.
DB of origin
PVOG
Length
38539
Host Name
Streptococcus suis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
64
%GC
40.85
Number of singletons
10
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
AGF87433.1 KC348600_p22 hypothetical protein phrog_501 head closure Hc1 connector -1 16129 16467
AGF87456.1 KC348600_p45 endodeoxyribonuclease phrog_140 RusA-like Holliday junction resolvase DNA, RNA and nucleotide metabolism -1 27428 27877
AGF87449.1 KC348600_p38 YopX protein phrog_98 unknown function unknown function -1 25291 25689
AGF87451.1 KC348600_p40 hypothetical protein singleton unknown function unknown function -1 25817 25951
AGF87424.1 KC348600_p13 hypothetical protein phrog_1137 unknown function unknown function -1 6981 7193
AGF87452.1 KC348600_p41 hypothetical protein phrog_121 unknown function unknown function -1 25951 26493
AGF87443.1 KC348600_p32 HNH endonuclease phrog_338 HNH endonuclease DNA, RNA and nucleotide metabolism -1 23242 23604
AGF87460.1 KC348600_p49 hypothetical protein singleton unknown function unknown function -1 29991 30182
AGF87468.1 KC348600_p57 hypothetical protein phrog_12118 unknown function unknown function -1 33182 33451
AGF87450.1 KC348600_p39 hypothetical protein phrog_23276 unknown function unknown function -1 25683 25820
AGF87428.1 KC348600_p17 hypothetical protein phrog_1633 unknown function unknown function -1 14293 14676
AGF87462.1 KC348600_p51 hypothetical protein phrog_2108 unknown function unknown function -1 30300 30464
AGF87471.1 KC348600_p60 hypothetical protein phrog_3 transcriptional repressor transcription regulation -1 34575 34787
AGF87465.1 KC348600_p54 N-terminal phage replisome organiser phrog_186 DnaD-like helicase loader DNA, RNA and nucleotide metabolism -1 31742 32539
AGF87454.1 KC348600_p43 hypothetical protein phrog_30930 unknown function unknown function -1 26798 27154
AGF87429.1 KC348600_p18 hypothetical protein phrog_1526 unknown function unknown function -1 14673 14951
AGF87444.1 KC348600_p33 phage transcriptional regulator phrog_248 transcriptional activator transcription regulation -1 23970 24392
AGF87472.1 KC348600_p61 phage DNA-binding protein phrog_8 transcriptional regulator transcription regulation 1 35075 35455
AGF87427.1 KC348600_p16 phage tail protein phrog_58 tail length tape measure protein tail -1 12105 14303
AGF87447.1 KC348600_p36 hypothetical protein singleton unknown function unknown function -1 24923 25096
AGF87475.1 KC348600_p64 Abi-like protein phrog_2158 abortive infection resistance protein moron, auxiliary metabolic gene and host takeover 1 37493 38446
AGF87425.1 KC348600_p14 gp58-like protein phrog_1330 tail protein tail -1 7202 11428
AGF87422.1 KC348600_p11 holin phrog_199 holin lysis -1 6097 6630
AGF87455.1 KC348600_p44 hypothetical protein phrog_236 nucleotide kinase other -1 27147 27431
AGF87413.1 KC348600_p2 phage integrase phrog_1 integrase integration and excision 1 127 1215
AGF87473.1 KC348600_p62 hypothetical protein phrog_87 metallo-protease other 1 35460 35849
AGF87426.1 KC348600_p15 phage tail protein phrog_33 distal tail protein Dit tail -1 11410 12105
AGF87464.1 KC348600_p53 hypothetical protein singleton unknown function unknown function 1 31358 31591
AGF87463.1 KC348600_p52 IstB-like ATP binding protein phrog_50 DnaC-like helicase loader DNA, RNA and nucleotide metabolism -1 30470 31297
AGF87436.1 KC348600_p25 phage capsid protein phrog_10 major head protein head and packaging -1 17088 17975
AGF87466.1 KC348600_p55 hypothetical protein phrog_2113 unknown function unknown function -1 32554 32907
AGF87423.1 KC348600_p12 hypothetical protein phrog_1164 unknown function unknown function -1 6634 6978
AGF87441.1 KC348600_p30 hypothetical protein phrog_2494 minor head protein head and packaging -1 20557 21777
AGF87467.1 KC348600_p56 hypothetical protein phrog_12597 unknown function unknown function -1 33007 33201
AGF87457.1 KC348600_p46 hypothetical protein phrog_1341 unknown function unknown function -1 27874 28338
AGF87432.1 KC348600_p21 hypothetical protein phrog_387 neck protein connector -1 15897 16136
AGF87419.1 KC348600_p8 Abi-like protein singleton unknown function unknown function -1 4735 5073
AGF87416.1 KC348600_p5 hypothetical protein singleton unknown function unknown function 1 3392 3610
AGF87474.1 KC348600_p63 phage membrane protein phrog_1847 unknown function unknown function 1 35865 37277
AGF87459.1 KC348600_p48 RecT family protein phrog_148 RecT-like ssDNA annealing protein DNA, RNA and nucleotide metabolism -1 29153 29971
AGF87430.1 KC348600_p19 phage major tail protein phrog_117 major tail protein tail -1 14962 15549
AGF87417.1 KC348600_p6 hypothetical protein singleton unknown function unknown function 1 3627 4118
AGF87421.1 KC348600_p10 hypothetical protein singleton unknown function unknown function -1 5993 6094
AGF87438.1 KC348600_p27 phage terminase phrog_9 terminase large subunit head and packaging -1 18530 19942
AGF87442.1 KC348600_p31 phage portal protein phrog_104 portal protein head and packaging -1 21784 23145
AGF87435.1 KC348600_p24 hypothetical protein phrog_1539 Arc-like repressor transcription regulation -1 16853 17077
AGF87414.1 KC348600_p3 hypothetical protein phrog_2277 unknown function unknown function 1 2204 2410
AGF87440.1 KC348600_p29 hypothetical protein phrog_36787 unknown function unknown function -1 20319 20579
AGF87448.1 KC348600_p37 hypothetical protein phrog_4706 unknown function unknown function -1 25096 25287
AGF87412.1 KC348600_p1 hypothetical protein singleton unknown function unknown function -1 38523 38539
AGF87412.1 KC348600_p1 hypothetical protein singleton unknown function unknown function -1 1 115
AGF87437.1 KC348600_p26 hypothetical protein phrog_233 head scaffolding protein head and packaging -1 17991 18449
AGF87458.1 KC348600_p47 hypothetical protein phrog_1227 exonuclease DNA, RNA and nucleotide metabolism -1 28351 29175
AGF87461.1 KC348600_p50 hypothetical protein phrog_17539 unknown function unknown function -1 30175 30300
AGF87445.1 KC348600_p34 hypothetical protein phrog_4779 transcriptional regulator transcription regulation -1 24467 24727
AGF87434.1 KC348600_p23 phage protein Gp19-like protein phrog_137 head-tail adaptor Ad1 connector -1 16454 16849
AGF87446.1 KC348600_p35 hypothetical protein phrog_2397 unknown function unknown function -1 24724 24930
AGF87470.1 KC348600_p59 AntA/AntB antirepressor phrog_63 anti-repressor Ant transcription regulation -1 33835 34554
AGF87418.1 KC348600_p7 hypothetical protein singleton unknown function unknown function 1 4327 4509
AGF87453.1 KC348600_p42 phage membrane protein phrog_2169 membrane protein moron, auxiliary metabolic gene and host takeover -1 26506 26805
AGF87415.1 KC348600_p4 hypothetical protein phrog_876 transcriptional repressor transcription regulation 1 3011 3235
AGF87420.1 KC348600_p9 N-acetylmuramoyl-L-alanine amidase phrog_833 endolysin lysis -1 5153 5989
AGF87431.1 KC348600_p20 hypothetical protein phrog_123 tail terminator connector -1 15565 15900
AGF87469.1 KC348600_p58 excisionase protein phrog_668 HTH DNA binding protein DNA, RNA and nucleotide metabolism -1 33448 33750
AGF87439.1 KC348600_p28 hypothetical protein phrog_903 unknown function unknown function -1 19998 20291