Genomic map of Streptococcus phage phiS10 (KC348604)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
KC348604
Definition
Streptococcus phage phiS10, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae.
DB of origin
PVOG
Length
35373
Host Name
Streptococcus suis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
54
%GC
41.79
Number of singletons
5
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
AGF87697.1 KC348604_p48 hypothetical protein phrog_1137 unknown function unknown function 1 31892 32101
AGF87700.1 KC348604_p51 phage holin phrog_297 holin lysis 1 32736 32978
AGF87694.1 KC348604_p45 hypothetical protein phrog_1194 unknown function unknown function 1 26457 26807
AGF87653.1 KC348604_p4 hypothetical protein phrog_87 metallo-protease other -1 2727 3116
AGF87660.1 KC348604_p11 hypothetical protein phrog_28634 unknown function unknown function 1 5519 5644
AGF87650.1 KC348604_p1 hypothetical protein singleton unknown function unknown function 1 33 74
AGF87669.1 KC348604_p20 hypothetical protein singleton unknown function unknown function 1 10048 10239
AGF87675.1 KC348604_p26 hypothetical protein phrog_4779 transcriptional regulator transcription regulation 1 11846 12106
AGF87685.1 KC348604_p36 carbohydrate binding domain protein phrog_422 major head protein head and packaging 1 19394 20410
AGF87673.1 KC348604_p24 hypothetical protein phrog_2397 unknown function unknown function 1 11424 11645
AGF87659.1 KC348604_p10 hypothetical protein phrog_12597 unknown function unknown function 1 5322 5522
AGF87652.1 KC348604_p3 phage membrane protein phrog_1847 unknown function unknown function -1 1299 2711
AGF87686.1 KC348604_p37 hypothetical protein phrog_933 unknown function unknown function 1 20421 20609
AGF87658.1 KC348604_p9 hypothetical protein phrog_12118 unknown function unknown function 1 5084 5341
AGF87703.1 KC348604_p54 toxin-antitoxin system, antitoxin component, HicB family phrog_497 toxin-antitoxin system HicB-like moron, auxiliary metabolic gene and host takeover 1 34824 35228
AGF87679.1 KC348604_p30 phage portal protein phrog_64 portal protein head and packaging 1 14862 16304
AGF87677.1 KC348604_p28 phage terminase small subunit phrog_51 terminase small subunit head and packaging 1 13095 13628
AGF87662.1 KC348604_p13 hypothetical protein phrog_7964 unknown function unknown function 1 6400 6702
AGF87657.1 KC348604_p8 DNA-binding phage protein phrog_668 HTH DNA binding protein DNA, RNA and nucleotide metabolism 1 4812 5087
AGF87670.1 KC348604_p21 hypothetical protein singleton unknown function unknown function 1 10425 10763
AGF87676.1 KC348604_p27 phage transcriptional regulator phrog_248 transcriptional activator transcription regulation 1 12181 12603
AGF87684.1 KC348604_p35 hypothetical protein phrog_172 head scaffolding protein head and packaging 1 18768 19376
AGF87656.1 KC348604_p7 AntA/AntB antirepressor phrog_63 anti-repressor Ant transcription regulation 1 4022 4747
AGF87671.1 KC348604_p22 hypothetical protein phrog_4252 unknown function unknown function 1 10763 10933
AGF87678.1 KC348604_p29 phage terminase large subunit phrog_2 terminase large subunit head and packaging 1 13618 14850
AGF87666.1 KC348604_p17 hypothetical protein phrog_674 unknown function unknown function 1 8005 9060
AGF87691.1 KC348604_p42 hypothetical protein phrog_183 tail chaperone protein tail 1 22524 22898
AGF87674.1 KC348604_p25 hypothetical protein phrog_26928 unknown function unknown function 1 11642 11845
AGF87672.1 KC348604_p23 YopX protein phrog_98 unknown function unknown function 1 11048 11431
AGF87682.1 KC348604_p33 hypothetical protein phrog_1233 unknown function unknown function 1 17942 18262
AGF87687.1 KC348604_p38 hypothetical protein phrog_2168 unknown function unknown function 1 20866 21228
AGF87681.1 KC348604_p32 hypothetical protein phrog_6332 unknown function unknown function 1 17668 17889
AGF87692.1 KC348604_p43 hypothetical protein phrog_2066 unknown function unknown function 1 22925 23284
AGF87693.1 KC348604_p44 TMP repeat-containing protein phrog_1535 tail length tape measure protein tail 1 23310 26447
AGF87698.1 KC348604_p49 hypothetical protein phrog_1164 unknown function unknown function 1 32104 32448
AGF87702.1 KC348604_p53 YcfA-like protein phrog_353 toxin moron, auxiliary metabolic gene and host takeover 1 34578 34763
AGF87688.1 KC348604_p39 phage neck protein phrog_5 tail completion or Neck1 protein connector 1 21216 21728
AGF87696.1 KC348604_p47 gp58-like protein phrog_10507 unknown function unknown function 1 29253 31883
AGF87654.1 KC348604_p5 repressor phrog_8 transcriptional regulator transcription regulation -1 3121 3501
AGF87695.1 KC348604_p46 gp58-like protein phrog_1210 PblB-type receptor binding other 1 26839 29205
AGF87664.1 KC348604_p15 hypothetical protein phrog_2553 unknown function unknown function 1 6912 7097
AGF87655.1 KC348604_p6 hypothetical protein phrog_3 transcriptional repressor transcription regulation 1 3789 4001
AGF87680.1 KC348604_p31 protein F-like protein phrog_115 minor head protein head and packaging 1 16255 17649
AGF87651.1 KC348604_p2 phage integrase phrog_1 integrase integration and excision -1 71 1165
AGF87689.1 KC348604_p40 hypothetical protein phrog_78 tail terminator connector 1 21725 22093
AGF87668.1 KC348604_p19 hypothetical protein phrog_1227 exonuclease DNA, RNA and nucleotide metabolism 1 9198 10034
AGF87699.1 KC348604_p50 hypothetical protein phrog_1296 holin lysis 1 32452 32730
AGF87661.1 KC348604_p12 hypothetical protein phrog_1456 DNA binding protein DNA, RNA and nucleotide metabolism 1 5697 6062
AGF87683.1 KC348604_p34 hypothetical protein phrog_903 unknown function unknown function 1 18259 18504
AGF87665.1 KC348604_p16 recT protein phrog_148 RecT-like ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 7094 8005
AGF87667.1 KC348604_p18 hypothetical protein singleton unknown function unknown function 1 9065 9205
AGF87663.1 KC348604_p14 hypothetical protein singleton unknown function unknown function 1 6702 6908
AGF87701.1 KC348604_p52 phage lysin phrog_3861 amidase lysis 1 33066 34424
AGF87690.1 KC348604_p41 phage tail protein phrog_158 major tail protein tail 1 22097 22513