| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
KC348604 |
Definition |
Streptococcus phage phiS10, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae. |
DB of origin |
PVOG |
Length |
35373 |
Host Name |
Streptococcus suis |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
54 |
%GC |
41.79 |
Number of singletons |
5 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| AGF87697.1 | KC348604_p48 | hypothetical protein | phrog_1137 | unknown function | unknown function | 1 | 31892 | 32101 |
| AGF87700.1 | KC348604_p51 | phage holin | phrog_297 | holin | lysis | 1 | 32736 | 32978 |
| AGF87694.1 | KC348604_p45 | hypothetical protein | phrog_1194 | unknown function | unknown function | 1 | 26457 | 26807 |
| AGF87653.1 | KC348604_p4 | hypothetical protein | phrog_87 | metallo-protease | other | -1 | 2727 | 3116 |
| AGF87660.1 | KC348604_p11 | hypothetical protein | phrog_28634 | unknown function | unknown function | 1 | 5519 | 5644 |
| AGF87650.1 | KC348604_p1 | hypothetical protein | singleton | unknown function | unknown function | 1 | 33 | 74 |
| AGF87669.1 | KC348604_p20 | hypothetical protein | singleton | unknown function | unknown function | 1 | 10048 | 10239 |
| AGF87675.1 | KC348604_p26 | hypothetical protein | phrog_4779 | transcriptional regulator | transcription regulation | 1 | 11846 | 12106 |
| AGF87685.1 | KC348604_p36 | carbohydrate binding domain protein | phrog_422 | major head protein | head and packaging | 1 | 19394 | 20410 |
| AGF87673.1 | KC348604_p24 | hypothetical protein | phrog_2397 | unknown function | unknown function | 1 | 11424 | 11645 |
| AGF87659.1 | KC348604_p10 | hypothetical protein | phrog_12597 | unknown function | unknown function | 1 | 5322 | 5522 |
| AGF87652.1 | KC348604_p3 | phage membrane protein | phrog_1847 | unknown function | unknown function | -1 | 1299 | 2711 |
| AGF87686.1 | KC348604_p37 | hypothetical protein | phrog_933 | unknown function | unknown function | 1 | 20421 | 20609 |
| AGF87658.1 | KC348604_p9 | hypothetical protein | phrog_12118 | unknown function | unknown function | 1 | 5084 | 5341 |
| AGF87703.1 | KC348604_p54 | toxin-antitoxin system, antitoxin component, HicB family | phrog_497 | toxin-antitoxin system HicB-like | moron, auxiliary metabolic gene and host takeover | 1 | 34824 | 35228 |
| AGF87679.1 | KC348604_p30 | phage portal protein | phrog_64 | portal protein | head and packaging | 1 | 14862 | 16304 |
| AGF87677.1 | KC348604_p28 | phage terminase small subunit | phrog_51 | terminase small subunit | head and packaging | 1 | 13095 | 13628 |
| AGF87662.1 | KC348604_p13 | hypothetical protein | phrog_7964 | unknown function | unknown function | 1 | 6400 | 6702 |
| AGF87657.1 | KC348604_p8 | DNA-binding phage protein | phrog_668 | HTH DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 4812 | 5087 |
| AGF87670.1 | KC348604_p21 | hypothetical protein | singleton | unknown function | unknown function | 1 | 10425 | 10763 |
| AGF87676.1 | KC348604_p27 | phage transcriptional regulator | phrog_248 | transcriptional activator | transcription regulation | 1 | 12181 | 12603 |
| AGF87684.1 | KC348604_p35 | hypothetical protein | phrog_172 | head scaffolding protein | head and packaging | 1 | 18768 | 19376 |
| AGF87656.1 | KC348604_p7 | AntA/AntB antirepressor | phrog_63 | anti-repressor Ant | transcription regulation | 1 | 4022 | 4747 |
| AGF87671.1 | KC348604_p22 | hypothetical protein | phrog_4252 | unknown function | unknown function | 1 | 10763 | 10933 |
| AGF87678.1 | KC348604_p29 | phage terminase large subunit | phrog_2 | terminase large subunit | head and packaging | 1 | 13618 | 14850 |
| AGF87666.1 | KC348604_p17 | hypothetical protein | phrog_674 | unknown function | unknown function | 1 | 8005 | 9060 |
| AGF87691.1 | KC348604_p42 | hypothetical protein | phrog_183 | tail chaperone protein | tail | 1 | 22524 | 22898 |
| AGF87674.1 | KC348604_p25 | hypothetical protein | phrog_26928 | unknown function | unknown function | 1 | 11642 | 11845 |
| AGF87672.1 | KC348604_p23 | YopX protein | phrog_98 | unknown function | unknown function | 1 | 11048 | 11431 |
| AGF87682.1 | KC348604_p33 | hypothetical protein | phrog_1233 | unknown function | unknown function | 1 | 17942 | 18262 |
| AGF87687.1 | KC348604_p38 | hypothetical protein | phrog_2168 | unknown function | unknown function | 1 | 20866 | 21228 |
| AGF87681.1 | KC348604_p32 | hypothetical protein | phrog_6332 | unknown function | unknown function | 1 | 17668 | 17889 |
| AGF87692.1 | KC348604_p43 | hypothetical protein | phrog_2066 | unknown function | unknown function | 1 | 22925 | 23284 |
| AGF87693.1 | KC348604_p44 | TMP repeat-containing protein | phrog_1535 | tail length tape measure protein | tail | 1 | 23310 | 26447 |
| AGF87698.1 | KC348604_p49 | hypothetical protein | phrog_1164 | unknown function | unknown function | 1 | 32104 | 32448 |
| AGF87702.1 | KC348604_p53 | YcfA-like protein | phrog_353 | toxin | moron, auxiliary metabolic gene and host takeover | 1 | 34578 | 34763 |
| AGF87688.1 | KC348604_p39 | phage neck protein | phrog_5 | tail completion or Neck1 protein | connector | 1 | 21216 | 21728 |
| AGF87696.1 | KC348604_p47 | gp58-like protein | phrog_10507 | unknown function | unknown function | 1 | 29253 | 31883 |
| AGF87654.1 | KC348604_p5 | repressor | phrog_8 | transcriptional regulator | transcription regulation | -1 | 3121 | 3501 |
| AGF87695.1 | KC348604_p46 | gp58-like protein | phrog_1210 | PblB-type receptor binding | other | 1 | 26839 | 29205 |
| AGF87664.1 | KC348604_p15 | hypothetical protein | phrog_2553 | unknown function | unknown function | 1 | 6912 | 7097 |
| AGF87655.1 | KC348604_p6 | hypothetical protein | phrog_3 | transcriptional repressor | transcription regulation | 1 | 3789 | 4001 |
| AGF87680.1 | KC348604_p31 | protein F-like protein | phrog_115 | minor head protein | head and packaging | 1 | 16255 | 17649 |
| AGF87651.1 | KC348604_p2 | phage integrase | phrog_1 | integrase | integration and excision | -1 | 71 | 1165 |
| AGF87689.1 | KC348604_p40 | hypothetical protein | phrog_78 | tail terminator | connector | 1 | 21725 | 22093 |
| AGF87668.1 | KC348604_p19 | hypothetical protein | phrog_1227 | exonuclease | DNA, RNA and nucleotide metabolism | 1 | 9198 | 10034 |
| AGF87699.1 | KC348604_p50 | hypothetical protein | phrog_1296 | holin | lysis | 1 | 32452 | 32730 |
| AGF87661.1 | KC348604_p12 | hypothetical protein | phrog_1456 | DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 5697 | 6062 |
| AGF87683.1 | KC348604_p34 | hypothetical protein | phrog_903 | unknown function | unknown function | 1 | 18259 | 18504 |
| AGF87665.1 | KC348604_p16 | recT protein | phrog_148 | RecT-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | 1 | 7094 | 8005 |
| AGF87667.1 | KC348604_p18 | hypothetical protein | singleton | unknown function | unknown function | 1 | 9065 | 9205 |
| AGF87663.1 | KC348604_p14 | hypothetical protein | singleton | unknown function | unknown function | 1 | 6702 | 6908 |
| AGF87701.1 | KC348604_p52 | phage lysin | phrog_3861 | amidase | lysis | 1 | 33066 | 34424 |
| AGF87690.1 | KC348604_p41 | phage tail protein | phrog_158 | major tail protein | tail | 1 | 22097 | 22513 |