Genomic map of Streptococcus phage phiSS12 (KC413987)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
KC413987
Definition
Streptococcus phage phiSS12, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae.
DB of origin
PVOG
Length
35598
Host Name
Streptococcus suis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
56
%GC
41.56
Number of singletons
1
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
AGE61165.1 KC413987_p16 hypothetical protein phrog_933 unknown function unknown function -1 13493 13681
AGE61176.1 KC413987_p27 hypothetical protein phrog_4455 unknown function unknown function -1 22315 22581
AGE61153.1 KC413987_p4 hypothetical protein phrog_1164 unknown function unknown function -1 1378 1722
AGE61161.1 KC413987_p12 hypothetical protein phrog_78 tail terminator connector -1 12009 12377
AGE61204.1 KC413987_p55 PemK-like protein phrog_13411 MazF-like growth inhibitor moron, auxiliary metabolic gene and host takeover 1 33944 34378
AGE61198.1 KC413987_p49 AntA/AntB antirepressor phrog_63 anti-repressor Ant transcription regulation -1 30216 30926
AGE61179.1 KC413987_p30 hypothetical protein phrog_5513 unknown function unknown function -1 23023 23256
AGE61175.1 KC413987_p26 hypothetical protein phrog_36 transcriptional regulator transcription regulation -1 21831 22280
AGE61163.1 KC413987_p14 hypothetical protein phrog_2168 unknown function unknown function -1 12874 13143
AGE61171.1 KC413987_p22 hypothetical protein phrog_115 minor head protein head and packaging -1 16332 17789
AGE61185.1 KC413987_p36 single-strand binding protein phrog_44 single strand DNA binding protein DNA, RNA and nucleotide metabolism -1 25146 25628
AGE61152.1 KC413987_p3 hypothetical protein phrog_1625 involved in bacteriocin production or immunity moron, auxiliary metabolic gene and host takeover -1 1075 1374
AGE61178.1 KC413987_p29 hypothetical protein phrog_12650 unknown function unknown function -1 22847 23023
AGE61173.1 KC413987_p24 phage terminase phrog_38 terminase large subunit head and packaging -1 19207 20625
AGE61150.1 KC413987_p1 phage lysin phrog_1309 endolysin lysis -1 1 738
AGE61201.1 KC413987_p52 Helix-turn-helix family protein singleton unknown function unknown function -1 32277 32429
AGE61155.1 KC413987_p6 hypothetical protein phrog_1210 PblB-type receptor binding other -1 1952 7264
AGE61170.1 KC413987_p21 Cys_rich_CPCC family protein phrog_6332 unknown function unknown function -1 16163 16363
AGE61191.1 KC413987_p42 hypothetical protein phrog_2553 unknown function unknown function -1 28292 28471
AGE61202.1 KC413987_p53 hypothetical protein phrog_2253 unknown function unknown function -1 32500 32664
AGE61194.1 KC413987_p45 hypothetical protein phrog_1456 DNA binding protein DNA, RNA and nucleotide metabolism -1 28981 29346
AGE61186.1 KC413987_p37 hypothetical protein phrog_4667 unknown function unknown function -1 25710 25889
AGE61180.1 KC413987_p31 hypothetical protein phrog_884 unknown function unknown function -1 23272 23574
AGE61166.1 KC413987_p17 carbohydrate binding domain protein phrog_422 major head protein head and packaging -1 13692 14708
AGE61167.1 KC413987_p18 hypothetical protein phrog_172 head scaffolding protein head and packaging -1 14726 15337
AGE61187.1 KC413987_p38 hypothetical protein phrog_4027 unknown function unknown function -1 25879 26205
AGE61174.1 KC413987_p25 HNH endonuclease phrog_309 terminase small subunit head and packaging -1 20618 21445
AGE61156.1 KC413987_p7 hypothetical protein phrog_1194 unknown function unknown function -1 7296 7646
AGE61162.1 KC413987_p13 hypothetical protein phrog_5 tail completion or Neck1 protein connector -1 12374 12886
AGE61157.1 KC413987_p8 TMP repeat-containing protein phrog_1535 tail length tape measure protein tail -1 7656 10811
AGE61184.1 KC413987_p35 hypothetical protein phrog_21494 unknown function unknown function -1 24744 25118
AGE61151.1 KC413987_p2 phage holin phrog_608 holin lysis -1 722 1072
AGE61159.1 KC413987_p10 hypothetical protein phrog_183 tail chaperone protein tail -1 11204 11578
AGE61181.1 KC413987_p32 hypothetical protein phrog_827 Holliday junction resolvase DNA, RNA and nucleotide metabolism -1 23584 24102
AGE61189.1 KC413987_p40 hypothetical protein phrog_674 unknown function unknown function -1 26487 27515
AGE61183.1 KC413987_p34 hypothetical protein phrog_6041 unknown function unknown function -1 24521 24751
AGE61197.1 KC413987_p48 DNA-binding phage protein phrog_668 HTH DNA binding protein DNA, RNA and nucleotide metabolism -1 29858 30133
AGE61193.1 KC413987_p44 hypothetical protein phrog_5637 unknown function unknown function -1 28610 28753
AGE61172.1 KC413987_p23 phage portal protein phrog_64 portal protein head and packaging -1 17731 19194
AGE61169.1 KC413987_p20 hypothetical protein phrog_903 unknown function unknown function -1 15713 15949
AGE61164.1 KC413987_p15 Phage gp6-like head-tail connector protein phrog_132 head-tail adaptor connector -1 13154 13483
AGE61190.1 KC413987_p41 RecT family protein phrog_2760 RecT-like ssDNA annealing protein DNA, RNA and nucleotide metabolism -1 27525 28295
AGE61205.1 KC413987_p56 phage integrase phrog_1 integrase integration and excision 1 34504 35598
AGE61192.1 KC413987_p43 hypothetical protein phrog_4614 unknown function unknown function -1 28471 28599
AGE61203.1 KC413987_p54 Helix-turn-helix family protein phrog_4 transcriptional repressor transcription regulation 1 33026 33769
AGE61154.1 KC413987_p5 hypothetical protein phrog_1137 unknown function unknown function -1 1725 1943
AGE61158.1 KC413987_p9 hypothetical protein phrog_2066 unknown function unknown function -1 10818 11177
AGE61188.1 KC413987_p39 hypothetical protein phrog_8210 unknown function unknown function -1 26215 26484
AGE61196.1 KC413987_p47 hypothetical protein phrog_12118 unknown function unknown function -1 29604 29861
AGE61200.1 KC413987_p51 hypothetical protein phrog_16280 unknown function unknown function -1 31765 32097
AGE61177.1 KC413987_p28 hypothetical protein phrog_7136 unknown function unknown function -1 22578 22847
AGE61182.1 KC413987_p33 hypothetical protein phrog_1341 unknown function unknown function -1 24099 24431
AGE61199.1 KC413987_p50 hypothetical protein phrog_1305 DNA binding protein DNA, RNA and nucleotide metabolism 1 30980 31669
AGE61195.1 KC413987_p46 hypothetical protein phrog_12597 unknown function unknown function -1 29399 29623
AGE61168.1 KC413987_p19 hypothetical protein phrog_419 unknown function unknown function -1 15411 15701
AGE61160.1 KC413987_p11 phage tail protein phrog_158 major tail protein tail -1 11589 12005