| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
KC413987 |
Definition |
Streptococcus phage phiSS12, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae. |
DB of origin |
PVOG |
Length |
35598 |
Host Name |
Streptococcus suis |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
56 |
%GC |
41.56 |
Number of singletons |
1 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| AGE61165.1 | KC413987_p16 | hypothetical protein | phrog_933 | unknown function | unknown function | -1 | 13493 | 13681 |
| AGE61176.1 | KC413987_p27 | hypothetical protein | phrog_4455 | unknown function | unknown function | -1 | 22315 | 22581 |
| AGE61153.1 | KC413987_p4 | hypothetical protein | phrog_1164 | unknown function | unknown function | -1 | 1378 | 1722 |
| AGE61161.1 | KC413987_p12 | hypothetical protein | phrog_78 | tail terminator | connector | -1 | 12009 | 12377 |
| AGE61204.1 | KC413987_p55 | PemK-like protein | phrog_13411 | MazF-like growth inhibitor | moron, auxiliary metabolic gene and host takeover | 1 | 33944 | 34378 |
| AGE61198.1 | KC413987_p49 | AntA/AntB antirepressor | phrog_63 | anti-repressor Ant | transcription regulation | -1 | 30216 | 30926 |
| AGE61179.1 | KC413987_p30 | hypothetical protein | phrog_5513 | unknown function | unknown function | -1 | 23023 | 23256 |
| AGE61175.1 | KC413987_p26 | hypothetical protein | phrog_36 | transcriptional regulator | transcription regulation | -1 | 21831 | 22280 |
| AGE61163.1 | KC413987_p14 | hypothetical protein | phrog_2168 | unknown function | unknown function | -1 | 12874 | 13143 |
| AGE61171.1 | KC413987_p22 | hypothetical protein | phrog_115 | minor head protein | head and packaging | -1 | 16332 | 17789 |
| AGE61185.1 | KC413987_p36 | single-strand binding protein | phrog_44 | single strand DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 25146 | 25628 |
| AGE61152.1 | KC413987_p3 | hypothetical protein | phrog_1625 | involved in bacteriocin production or immunity | moron, auxiliary metabolic gene and host takeover | -1 | 1075 | 1374 |
| AGE61178.1 | KC413987_p29 | hypothetical protein | phrog_12650 | unknown function | unknown function | -1 | 22847 | 23023 |
| AGE61173.1 | KC413987_p24 | phage terminase | phrog_38 | terminase large subunit | head and packaging | -1 | 19207 | 20625 |
| AGE61150.1 | KC413987_p1 | phage lysin | phrog_1309 | endolysin | lysis | -1 | 1 | 738 |
| AGE61201.1 | KC413987_p52 | Helix-turn-helix family protein | singleton | unknown function | unknown function | -1 | 32277 | 32429 |
| AGE61155.1 | KC413987_p6 | hypothetical protein | phrog_1210 | PblB-type receptor binding | other | -1 | 1952 | 7264 |
| AGE61170.1 | KC413987_p21 | Cys_rich_CPCC family protein | phrog_6332 | unknown function | unknown function | -1 | 16163 | 16363 |
| AGE61191.1 | KC413987_p42 | hypothetical protein | phrog_2553 | unknown function | unknown function | -1 | 28292 | 28471 |
| AGE61202.1 | KC413987_p53 | hypothetical protein | phrog_2253 | unknown function | unknown function | -1 | 32500 | 32664 |
| AGE61194.1 | KC413987_p45 | hypothetical protein | phrog_1456 | DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 28981 | 29346 |
| AGE61186.1 | KC413987_p37 | hypothetical protein | phrog_4667 | unknown function | unknown function | -1 | 25710 | 25889 |
| AGE61180.1 | KC413987_p31 | hypothetical protein | phrog_884 | unknown function | unknown function | -1 | 23272 | 23574 |
| AGE61166.1 | KC413987_p17 | carbohydrate binding domain protein | phrog_422 | major head protein | head and packaging | -1 | 13692 | 14708 |
| AGE61167.1 | KC413987_p18 | hypothetical protein | phrog_172 | head scaffolding protein | head and packaging | -1 | 14726 | 15337 |
| AGE61187.1 | KC413987_p38 | hypothetical protein | phrog_4027 | unknown function | unknown function | -1 | 25879 | 26205 |
| AGE61174.1 | KC413987_p25 | HNH endonuclease | phrog_309 | terminase small subunit | head and packaging | -1 | 20618 | 21445 |
| AGE61156.1 | KC413987_p7 | hypothetical protein | phrog_1194 | unknown function | unknown function | -1 | 7296 | 7646 |
| AGE61162.1 | KC413987_p13 | hypothetical protein | phrog_5 | tail completion or Neck1 protein | connector | -1 | 12374 | 12886 |
| AGE61157.1 | KC413987_p8 | TMP repeat-containing protein | phrog_1535 | tail length tape measure protein | tail | -1 | 7656 | 10811 |
| AGE61184.1 | KC413987_p35 | hypothetical protein | phrog_21494 | unknown function | unknown function | -1 | 24744 | 25118 |
| AGE61151.1 | KC413987_p2 | phage holin | phrog_608 | holin | lysis | -1 | 722 | 1072 |
| AGE61159.1 | KC413987_p10 | hypothetical protein | phrog_183 | tail chaperone protein | tail | -1 | 11204 | 11578 |
| AGE61181.1 | KC413987_p32 | hypothetical protein | phrog_827 | Holliday junction resolvase | DNA, RNA and nucleotide metabolism | -1 | 23584 | 24102 |
| AGE61189.1 | KC413987_p40 | hypothetical protein | phrog_674 | unknown function | unknown function | -1 | 26487 | 27515 |
| AGE61183.1 | KC413987_p34 | hypothetical protein | phrog_6041 | unknown function | unknown function | -1 | 24521 | 24751 |
| AGE61197.1 | KC413987_p48 | DNA-binding phage protein | phrog_668 | HTH DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 29858 | 30133 |
| AGE61193.1 | KC413987_p44 | hypothetical protein | phrog_5637 | unknown function | unknown function | -1 | 28610 | 28753 |
| AGE61172.1 | KC413987_p23 | phage portal protein | phrog_64 | portal protein | head and packaging | -1 | 17731 | 19194 |
| AGE61169.1 | KC413987_p20 | hypothetical protein | phrog_903 | unknown function | unknown function | -1 | 15713 | 15949 |
| AGE61164.1 | KC413987_p15 | Phage gp6-like head-tail connector protein | phrog_132 | head-tail adaptor | connector | -1 | 13154 | 13483 |
| AGE61190.1 | KC413987_p41 | RecT family protein | phrog_2760 | RecT-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | -1 | 27525 | 28295 |
| AGE61205.1 | KC413987_p56 | phage integrase | phrog_1 | integrase | integration and excision | 1 | 34504 | 35598 |
| AGE61192.1 | KC413987_p43 | hypothetical protein | phrog_4614 | unknown function | unknown function | -1 | 28471 | 28599 |
| AGE61203.1 | KC413987_p54 | Helix-turn-helix family protein | phrog_4 | transcriptional repressor | transcription regulation | 1 | 33026 | 33769 |
| AGE61154.1 | KC413987_p5 | hypothetical protein | phrog_1137 | unknown function | unknown function | -1 | 1725 | 1943 |
| AGE61158.1 | KC413987_p9 | hypothetical protein | phrog_2066 | unknown function | unknown function | -1 | 10818 | 11177 |
| AGE61188.1 | KC413987_p39 | hypothetical protein | phrog_8210 | unknown function | unknown function | -1 | 26215 | 26484 |
| AGE61196.1 | KC413987_p47 | hypothetical protein | phrog_12118 | unknown function | unknown function | -1 | 29604 | 29861 |
| AGE61200.1 | KC413987_p51 | hypothetical protein | phrog_16280 | unknown function | unknown function | -1 | 31765 | 32097 |
| AGE61177.1 | KC413987_p28 | hypothetical protein | phrog_7136 | unknown function | unknown function | -1 | 22578 | 22847 |
| AGE61182.1 | KC413987_p33 | hypothetical protein | phrog_1341 | unknown function | unknown function | -1 | 24099 | 24431 |
| AGE61199.1 | KC413987_p50 | hypothetical protein | phrog_1305 | DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 30980 | 31669 |
| AGE61195.1 | KC413987_p46 | hypothetical protein | phrog_12597 | unknown function | unknown function | -1 | 29399 | 29623 |
| AGE61168.1 | KC413987_p19 | hypothetical protein | phrog_419 | unknown function | unknown function | -1 | 15411 | 15701 |
| AGE61160.1 | KC413987_p11 | phage tail protein | phrog_158 | major tail protein | tail | -1 | 11589 | 12005 |