| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
KC579452 |
Definition |
Enterobacteriophage phiKP26, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Drexlerviridae; Rogunavirinae; Rogunavirus. |
DB of origin |
PVOG |
Length |
47285 |
Host Name |
Salmonella enterica |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
78 |
%GC |
44.25 |
Number of singletons |
7 |
Number of paralogs |
1 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| AGH25148.1 | KC579452_p6 | hypothetical protein | phrog_2452 | unknown function | unknown function | 1 | 1325 | 1576 |
| AGH25199.1 | KC579452_p57 | hypothetical protein | phrog_2817 | unknown function | unknown function | 1 | 37166 | 37405 |
| AGH25172.1 | KC579452_p30 | hypothetical protein | phrog_569 | tail length tape measure protein | tail | 1 | 14765 | 15079 |
| AGH25174.1 | KC579452_p32 | tail tape measure protein | phrog_24 | tail length tape measure protein | tail | 1 | 15431 | 18484 |
| AGH25187.1 | KC579452_p45 | recombination protein | phrog_155 | Erf-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | 1 | 28477 | 29103 |
| AGH25210.1 | KC579452_p68 | hypothetical protein | phrog_2373 | DNA helicase | DNA, RNA and nucleotide metabolism | -1 | 41400 | 42989 |
| AGH25196.1 | KC579452_p54 | hypothetical protein | phrog_2676 | unknown function | unknown function | 1 | 36554 | 36772 |
| AGH25150.1 | KC579452_p8 | hypothetical protein | phrog_11452 | unknown function | unknown function | 1 | 1774 | 2067 |
| AGH25208.1 | KC579452_p66 | hypothetical protein | phrog_1804 | Rz-like spanin | lysis | 1 | 40642 | 41046 |
| AGH25190.1 | KC579452_p48 | tail fiber | phrog_4818 | tail fiber protein | tail | -1 | 29571 | 32348 |
| AGH25194.1 | KC579452_p52 | hypothetical protein | phrog_824 | unknown function | unknown function | 1 | 35912 | 36301 |
| AGH25175.1 | KC579452_p33 | minor tail protein | phrog_14 | minor tail protein | tail | 1 | 18516 | 18866 |
| AGH25200.1 | KC579452_p58 | hypothetical protein | phrog_4596 | unknown function | unknown function | 1 | 37402 | 37659 |
| AGH25146.1 | KC579452_p4 | hypothetical protein | phrog_12148 | unknown function | unknown function | 1 | 1042 | 1167 |
| AGH25153.1 | KC579452_p11 | hypothetical protein | phrog_10885 | unknown function | unknown function | 1 | 2440 | 2634 |
| AGH25202.1 | KC579452_p60 | HNH endonuclease | singleton | unknown function | unknown function | 1 | 39023 | 39214 |
| AGH25183.1 | KC579452_p41 | hypothetical protein | singleton | unknown function | unknown function | 1 | 26278 | 26382 |
| AGH25214.1 | KC579452_p72 | hypothetical protein | phrog_12926 | unknown function | unknown function | -1 | 44058 | 44360 |
| AGH25193.1 | KC579452_p51 | ATP-dependent helicase | phrog_16 | DNA helicase | DNA, RNA and nucleotide metabolism | 1 | 33918 | 35912 |
| AGH25213.1 | KC579452_p71 | hypothetical protein | phrog_2684 | unknown function | unknown function | -1 | 43679 | 44032 |
| AGH25177.1 | KC579452_p35 | minor tail protein | phrog_18 | minor tail protein | tail | 1 | 19188 | 19952 |
| AGH25162.1 | KC579452_p20 | DNA polymerase I | phrog_5073 | tail fiber protein | tail | 1 | 9098 | 10543 |
| AGH25158.1 | KC579452_p16 | portal protein | phrog_146 | portal protein | head and packaging | 1 | 5428 | 6702 |
| AGH25159.1 | KC579452_p17 | head morphogenesis protein | phrog_324 | head morphogenesis | head and packaging | 1 | 6683 | 7426 |
| AGH25192.1 | KC579452_p50 | transcriptional regulator | phrog_2856 | transcriptional regulator | transcription regulation | -1 | 33403 | 33876 |
| AGH25147.1 | KC579452_p5 | hypothetical protein | phrog_25960 | unknown function | unknown function | 1 | 1164 | 1325 |
| AGH25163.1 | KC579452_p21 | major capsid protein | phrog_264 | major head protein | head and packaging | 1 | 10623 | 11582 |
| AGH25203.1 | KC579452_p61 | hypothetical protein | phrog_7411 | unknown function | unknown function | 1 | 39243 | 39473 |
| AGH25151.1 | KC579452_p9 | fusion protein | phrog_3955 | unknown function | unknown function | 1 | 2071 | 2205 |
| AGH25188.1 | KC579452_p46 | hypothetical protein | singleton | unknown function | unknown function | -1 | 29063 | 29308 |
| AGH25207.1 | KC579452_p65 | phage-related lysozyme | phrog_7 | endolysin | lysis | 1 | 40175 | 40660 |
| AGH25189.1 | KC579452_p47 | single-stranded DNA binding protein | singleton | unknown function | unknown function | 1 | 29393 | 29611 |
| AGH25218.1 | KC579452_p76 | hypothetical protein | phrog_14327 | unknown function | unknown function | -1 | 45007 | 45201 |
| AGH25143.1 | KC579452_p1 | hypothetical protein | phrog_7327 | unknown function | unknown function | 1 | 30 | 473 |
| AGH25155.1 | KC579452_p13 | hypothetical protein | phrog_2919 | unknown function | unknown function | 1 | 3049 | 3198 |
| AGH25180.1 | KC579452_p38 | tail fiber protein | phrog_31 | central tail fiber J | tail | 1 | 21297 | 24722 |
| AGH25160.1 | KC579452_p18 | prohead protease | phrog_530 | head maturation protease | head and packaging | 1 | 7416 | 8525 |
| AGH25168.1 | KC579452_p26 | hypothetical protein | phrog_161 | head closure Hc1 | connector | 1 | 12849 | 13217 |
| AGH25191.1 | KC579452_p49 | alpha replication protein | phrog_510 | DNA primase | DNA, RNA and nucleotide metabolism | -1 | 32427 | 33356 |
| AGH25179.1 | KC579452_p37 | tail assembly protein | phrog_32 | tail assembly protein | tail | 1 | 20689 | 21255 |
| AGH25169.1 | KC579452_p27 | hypothetical protein | phrog_169 | tail completion or Neck1 protein | connector | 1 | 13210 | 13638 |
| AGH25171.1 | KC579452_p29 | major tail protein | phrog_584 | major tail protein | tail | 1 | 14041 | 14691 |
| AGH25154.1 | KC579452_p12 | hypothetical protein | singleton | unknown function | unknown function | -1 | 2704 | 2916 |
| AGH25157.1 | KC579452_p15 | terminase large subunit | phrog_38 | terminase large subunit | head and packaging | 1 | 3810 | 5378 |
| AGH25164.1 | KC579452_p22 | HNH endonuclease | singleton | unknown function | unknown function | -1 | 11544 | 11789 |
| AGH25181.1 | KC579452_p39 | hypothetical protein | phrog_1265 | membrane protein | moron, auxiliary metabolic gene and host takeover | -1 | 24684 | 25715 |
| AGH25149.1 | KC579452_p7 | hypothetical protein | phrog_1312 | unknown function | unknown function | 1 | 1649 | 1777 |
| AGH25201.1 | KC579452_p59 | hypothetical protein | phrog_704 | DNA repair exonuclease | DNA, RNA and nucleotide metabolism | 1 | 37811 | 38947 |
| AGH25170.1 | KC579452_p28 | hypothetical protein | phrog_179 | tail terminator | connector | 1 | 13640 | 14026 |
| AGH25144.1 | KC579452_p2 | hypothetical protein | phrog_13316 | unknown function | unknown function | 1 | 531 | 761 |
| AGH25215.1 | KC579452_p73 | hypothetical protein | phrog_4548 | unknown function | unknown function | -1 | 44435 | 44587 |
| AGH25173.1 | KC579452_p31 | hypothetical protein | phrog_680 | tail length tape measure protein | tail | 1 | 15142 | 15396 |
| AGH25186.1 | KC579452_p44 | exodeoxyribonuclease VIII | phrog_412 | exonuclease VIII | DNA, RNA and nucleotide metabolism | 1 | 27452 | 28420 |
| AGH25195.1 | KC579452_p53 | hypothetical protein | phrog_6031 | unknown function | unknown function | 1 | 36360 | 36554 |
| AGH25205.1 | KC579452_p63 | hypothetical protein | phrog_4788 | unknown function | unknown function | 1 | 39674 | 39847 |
| AGH25166.1 | KC579452_p24 | hypothetical protein | phrog_2716 | unknown function | unknown function | 1 | 12161 | 12406 |
| AGH25197.1 | KC579452_p55 | hypothetical protein | phrog_3249 | unknown function | unknown function | 1 | 36769 | 36969 |
| AGH25211.1 | KC579452_p69 | hypothetical protein | phrog_8121 | unknown function | unknown function | -1 | 43024 | 43203 |
| AGH25212.1 | KC579452_p70 | hypothetical protein | phrog_11986 | unknown function | unknown function | -1 | 43286 | 43468 |
| AGH25182.1 | KC579452_p40 | phage lipoprotein | phrog_4281 | unknown function | unknown function | -1 | 25715 | 26035 |
| AGH25198.1 | KC579452_p56 | hypothetical protein | phrog_2180 | unknown function | unknown function | 1 | 37044 | 37169 |
| AGH25152.1 | KC579452_p10 | fusion protein | phrog_303 | unknown function | unknown function | 1 | 2208 | 2447 |
| AGH25209.1 | KC579452_p67 | hypothetical protein | phrog_2794 | unknown function | unknown function | -1 | 41060 | 41395 |
| AGH25204.1 | KC579452_p62 | hypothetical protein | phrog_10052 | unknown function | unknown function | 1 | 39473 | 39661 |
| AGH25219.1 | KC579452_p77 | hypothetical protein | phrog_4841 | unknown function | unknown function | 1 | 45874 | 46389 |
| AGH25206.1 | KC579452_p64 | holin | phrog_2877 | holin | lysis | 1 | 39963 | 40178 |
| AGH25156.1 | KC579452_p14 | terminase small subunit | phrog_606 | terminase small subunit | head and packaging | 1 | 3298 | 3813 |
| AGH25145.1 | KC579452_p3 | hypothetical protein | phrog_8335 | unknown function | unknown function | 1 | 812 | 1045 |
| AGH25217.1 | KC579452_p75 | hypothetical protein | phrog_9053 | unknown function | unknown function | -1 | 44838 | 45017 |
| AGH25178.1 | KC579452_p36 | minor tail protein | phrog_30 | minor tail protein | tail | 1 | 19962 | 20708 |
| AGH25220.1 | KC579452_p78 | hypothetical protein | phrog_7327 | unknown function | unknown function | 1 | 46389 | 46961 |
| AGH25216.1 | KC579452_p74 | hypothetical protein | phrog_4448 | unknown function | unknown function | -1 | 44588 | 44827 |
| AGH25184.1 | KC579452_p42 | hypothetical protein | phrog_8235 | anti-repressor | transcription regulation | 1 | 26521 | 27180 |
| AGH25161.1 | KC579452_p19 | hypothetical protein | phrog_1989 | unknown function | unknown function | 1 | 8537 | 9004 |
| AGH25167.1 | KC579452_p25 | hypothetical protein | phrog_302 | virion structural protein | head and packaging | 1 | 12451 | 12852 |
| AGH25176.1 | KC579452_p34 | tailspike sialidase | phrog_29402 | unknown function | unknown function | 1 | 18939 | 19154 |
| AGH25165.1 | KC579452_p23 | hypothetical protein | singleton | unknown function | unknown function | 1 | 12008 | 12118 |
| AGH25185.1 | KC579452_p43 | hypothetical protein | phrog_5247 | unknown function | unknown function | 1 | 27254 | 27448 |