Genomic map of Pseudomonas phage LKO4 (KC758116)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
KC758116
Definition
Pseudomonas phage LKO4, complete genome.
Molecule type
DNA
Genome structure
circular
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Yuavirus; Pseudomonas virus LKO4.
DB of origin
PVOG
Length
61818
Host Name
Pseudomonas aeruginosa
Host domain
Bacteria
Is prophage?
undef
Number of proteins
89
%GC
64.42
Number of singletons
1
Number of paralogs
1

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
AGI11291.1 KC758116_p55 hypothetical protein phrog_21134 unknown function unknown function 1 33717 34115
AGI11240.1 KC758116_p4 hypothetical protein phrog_2378 unknown function unknown function 1 2955 3500
AGI11310.1 KC758116_p74 head-tail connector protein phrog_477 head-tail adaptor Ad1 connector 1 46721 47239
AGI11284.1 KC758116_p48 ribonuclease T phrog_255 exonuclease DNA, RNA and nucleotide metabolism 1 30286 30858
AGI11317.1 KC758116_p81 minor tail protein phrog_3336 tail length tape measure protein tail 1 50870 53695
AGI11273.1 KC758116_p37 hypothetical protein phrog_7569 unknown function unknown function 1 26853 27329
AGI11263.1 KC758116_p27 deoxycytidylate deaminase phrog_174 dCMP deaminase DNA, RNA and nucleotide metabolism 1 20066 20527
AGI11289.1 KC758116_p53 hypothetical protein phrog_10108 unknown function unknown function 1 33156 33485
AGI11286.1 KC758116_p50 hypothetical protein phrog_8776 unknown function unknown function 1 31131 31751
AGI11242.1 KC758116_p6 exodeoxyribonuclease V phrog_325 Dda-like helicase DNA, RNA and nucleotide metabolism 1 4583 5776
AGI11264.1 KC758116_p28 hypothetical protein phrog_2165 DNA helicase DNA, RNA and nucleotide metabolism 1 20520 20918
AGI11319.1 KC758116_p83 hypothetical protein phrog_687 structural protein head and packaging 1 55249 56250
AGI11307.1 KC758116_p71 Rz protein phrog_1327 Rz-like spanin lysis 1 45110 45679
AGI11254.1 KC758116_p18 hypothetical protein phrog_1965 unknown function unknown function 1 14630 15190
AGI11255.1 KC758116_p19 hypothetical protein phrog_19970 unknown function unknown function 1 15203 15316
AGI11320.1 KC758116_p84 hypothetical protein phrog_1082 tail assembly protein tail 1 56252 57922
AGI11265.1 KC758116_p29 repressor phrog_3 transcriptional repressor transcription regulation 1 20903 21229
AGI11274.1 KC758116_p39 hypothetical protein phrog_13330 unknown function unknown function 1 27326 27655
AGI11303.1 KC758116_p67 major capsid protein phrog_212 major head protein head and packaging 1 42659 43591
AGI11262.1 KC758116_p26 hypothetical protein phrog_20455 unknown function unknown function 1 19875 20069
AGI11279.1 KC758116_p43 hypothetical protein phrog_17285 unknown function unknown function 1 28530 28697
AGI11293.1 KC758116_p57 hypothetical protein phrog_6858 unknown function unknown function 1 34304 34555
AGI11299.1 KC758116_p63 hypothetical protein phrog_9943 unknown function unknown function 1 39712 39831
AGI11251.1 KC758116_p15 hypothetical protein phrog_9252 DNA repair photolyase DNA, RNA and nucleotide metabolism 1 11531 12973
AGI11237.1 KC758116_p1 hypothetical protein phrog_6420 unknown function unknown function 1 68 412
AGI11247.1 KC758116_p11 hypothetical protein phrog_4445 unknown function unknown function 1 9105 9368
AGI11300.1 KC758116_p64 GIY-YIG homing endonuclease phrog_314 homing endonuclease DNA, RNA and nucleotide metabolism 1 39831 40418
AGI11325.1 KC758116_p89 hypothetical protein phrog_5363 unknown function unknown function 1 61333 61818
AGI11278.1 KC758116_p42 hypothetical protein phrog_9190 unknown function unknown function 1 28264 28533
AGI11261.1 KC758116_p25 hypothetical protein phrog_8389 unknown function unknown function 1 19681 19878
AGI11285.1 KC758116_p49 RNA polymerase-binding protein phrog_54 DksA-like zinc-finger protein other 1 30851 31042
AGI11250.1 KC758116_p14 HNH endonuclease phrog_1872 endonuclease DNA, RNA and nucleotide metabolism 1 11088 11468
AGI11288.1 KC758116_p52 hypothetical protein phrog_3628 unknown function unknown function 1 32323 33075
AGI11283.1 KC758116_p47 hypothetical protein phrog_5016 unknown function unknown function 1 30003 30284
AGI11318.1 KC758116_p82 hypothetical protein phrog_687 structural protein head and packaging 1 53705 55234
AGI11294.1 KC758116_p58 hypothetical protein phrog_6596 unknown function unknown function 1 34555 34971
AGI11290.1 KC758116_p54 hypothetical protein phrog_8760 unknown function unknown function 1 33508 33720
AGI11276.1 KC758116_p40 hypothetical protein phrog_8020 unknown function unknown function 1 27673 27969
AGI11306.1 KC758116_p70 hypothetical protein phrog_8884 unknown function unknown function 1 44936 45106
AGI11269.1 KC758116_p33 hypothetical protein phrog_8203 unknown function unknown function 1 24395 25573
AGI11309.1 KC758116_p73 endolysin phrog_669 endolysin lysis 1 45996 46721
AGI11246.1 KC758116_p10 hypothetical protein phrog_7790 unknown function unknown function 1 8411 9094
AGI11248.1 KC758116_p12 hypothetical protein phrog_6364 unknown function unknown function 1 9378 10253
AGI11249.1 KC758116_p13 pyridoxal phosphate-dependent enzyme, D-cysteine desulfhydrase family phrog_7093 threonine dehydratase other 1 10255 11091
AGI11267.1 KC758116_p31 hypothetical protein phrog_2053 unknown function unknown function 1 23664 23879
AGI11314.1 KC758116_p78 hypothetical protein phrog_313 Tail assembly chaperone tail 1 49689 50147
AGI11297.1 KC758116_p61 terminase large subunit phrog_2 terminase large subunit head and packaging 1 36569 38116
AGI11287.1 KC758116_p51 hypothetical protein phrog_15793 unknown function unknown function 1 31876 32139
AGI11324.1 KC758116_p88 tail component phrog_1101 tail protein tail 1 59162 61333
AGI11305.1 KC758116_p69 hypothetical protein phrog_6213 unknown function unknown function 1 44303 44908
AGI11257.1 KC758116_p21 phosphohydrolase phrog_6047 unknown function unknown function 1 16381 17016
AGI11239.1 KC758116_p3 hypothetical protein phrog_5888 unknown function unknown function 1 2542 2895
AGI11256.1 KC758116_p20 thymidylate synthase/dCMP hydroxymethylase phrog_5131 thymidylate synthase DNA, RNA and nucleotide metabolism 1 15313 16368
AGI11308.1 KC758116_p72 holin phrog_8226 holin lysis 1 45676 46011
AGI11282.1 KC758116_p46 hypothetical protein phrog_35475 unknown function unknown function 1 29897 30157
AGI11311.1 KC758116_p75 tail attachment protein phrog_161 head closure Hc1 connector 1 47243 47611
AGI11323.1 KC758116_p87 hypothetical protein phrog_1196 tail assembly chaperone tail 1 58975 59178
AGI11270.1 KC758116_p34 hypothetical protein phrog_9297 unknown function unknown function 1 25570 25911
AGI11275.1 KC758116_p38 hypothetical protein singleton unknown function unknown function -1 27320 27532
AGI11302.1 KC758116_p66 hypothetical protein phrog_206 head scaffolding protein head and packaging 1 41682 42464
AGI11252.1 KC758116_p16 nucleoside triphosphate hydrolases phrog_800 terminase small subunit head and packaging 1 13028 13591
AGI11304.1 KC758116_p68 hypothetical protein phrog_15312 virion structural protein head and packaging 1 43697 44275
AGI11281.1 KC758116_p45 hypothetical protein phrog_16645 unknown function unknown function 1 29320 30003
AGI11312.1 KC758116_p76 hypothetical protein phrog_179 tail terminator connector 1 47608 48060
AGI11315.1 KC758116_p79 hypothetical protein phrog_3817 tail chaperonin tail 1 50171 50437
AGI11258.1 KC758116_p22 hypothetical protein phrog_14034 unknown function unknown function 1 16991 17218
AGI11253.1 KC758116_p17 hypothetical protein phrog_2396 unknown function unknown function 1 13603 14574
AGI11295.1 KC758116_p59 hypothetical protein phrog_7839 unknown function unknown function 1 34971 35336
AGI11313.1 KC758116_p77 hypothetical protein phrog_290 minor tail protein tail 1 48094 49626
AGI11280.1 KC758116_p44 hypothetical protein phrog_4301 unknown function unknown function 1 28676 29293
AGI11260.1 KC758116_p24 DNA polymerase I phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism 1 17573 19567
AGI11301.1 KC758116_p65 head morphogenesis protein phrog_241 head morphogenesis head and packaging 1 40405 41613
AGI11292.1 KC758116_p56 hypothetical protein phrog_11606 unknown function unknown function 1 34112 34300
AGI11316.1 KC758116_p80 phage morphogenesis protein phrog_169 tail completion or Neck1 protein connector 1 50421 50867
AGI11259.1 KC758116_p23 hypothetical protein phrog_5839 unknown function unknown function 1 17187 17573
AGI11322.1 KC758116_p86 tail assembly protein phrog_1180 tail assembly chaperone tail 1 58742 58975
AGI11272.1 KC758116_p36 pyrophosphatase phrog_9147 unknown function unknown function 1 26251 26856
AGI11268.1 KC758116_p32 hypothetical protein phrog_14626 unknown function unknown function 1 23991 24356
AGI11298.1 KC758116_p62 portal protein phrog_145 portal protein head and packaging 1 38174 39715
AGI11238.1 KC758116_p2 helicase phrog_62 DNA helicase DNA, RNA and nucleotide metabolism 1 840 2534
AGI11244.1 KC758116_p8 hypothetical protein phrog_17271 unknown function unknown function 1 7657 7845
AGI11266.1 KC758116_p30 primase phrog_1829 DNA primase DNA, RNA and nucleotide metabolism 1 21242 23653
AGI11277.1 KC758116_p41 hypothetical protein phrog_9341 unknown function unknown function 1 27972 28259
AGI11245.1 KC758116_p9 uracil-DNA glycosylase phrog_12275 unknown function unknown function 1 7805 8311
AGI11241.1 KC758116_p5 hypothetical protein phrog_2402 unknown function unknown function 1 3642 4481
AGI11321.1 KC758116_p85 minor tail protein phrog_778 tail assembly protein tail 1 57919 58728
AGI11243.1 KC758116_p7 ribonucleotide-diphosphate reductase subunit alpha phrog_84 ribonucleoside-diphosphate reductase large subunit DNA, RNA and nucleotide metabolism 1 5798 7660
AGI11296.1 KC758116_p60 terminase small subunit phrog_4044 terminase small subunit head and packaging 1 36042 36569
AGI11271.1 KC758116_p35 hypothetical protein phrog_8938 unknown function unknown function 1 25979 26248