| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
KC787108 |
Definition |
Mycobacterium phage DNAIII, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Liefievirus; unclassified Liefievirus. |
DB of origin |
PVOG |
Length |
39520 |
Host Name |
Mycobacterium tuberculosis |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
60 |
%GC |
66.82 |
Number of singletons |
2 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| AGK86232.1 | KC787108_p51 | protein of an unannotated phage | phrog_9043 | unknown function | unknown function | 1 | 36167 | 36586 |
| AGK86223.1 | KC787108_p42 | protein of an unannotated phage | phrog_4171 | RecT-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | 1 | 31644 | 33047 |
| AGK86225.1 | KC787108_p44 | protein of an unannotated phage | phrog_3926 | replication initiation protein | DNA, RNA and nucleotide metabolism | 1 | 33784 | 34155 |
| AGK86188.1 | KC787108_p7 | protein of an unannotated phage | phrog_10 | major head protein | head and packaging | 1 | 7112 | 8047 |
| AGK86238.1 | KC787108_p57 | protein of an unannotated phage | phrog_658 | unknown function | unknown function | 1 | 38054 | 38389 |
| AGK86210.1 | KC787108_p29 | protein of an unannotated phage | phrog_7198 | holin | lysis | 1 | 26186 | 26536 |
| AGK86190.1 | KC787108_p9 | protein of an unannotated phage | phrog_1290 | head-tail adaptor | connector | 1 | 8323 | 8820 |
| AGK86204.1 | KC787108_p23 | protein of an unannotated phage | phrog_7598 | unknown function | unknown function | 1 | 22601 | 22921 |
| AGK86230.1 | KC787108_p49 | protein of an unannotated phage | phrog_159 | RuvC-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 35449 | 36039 |
| AGK86222.1 | KC787108_p41 | protein of an unannotated phage | phrog_412 | exonuclease VIII | DNA, RNA and nucleotide metabolism | 1 | 30541 | 31626 |
| AGK86227.1 | KC787108_p46 | protein of an unannotated phage | phrog_7826 | unknown function | unknown function | 1 | 34354 | 34674 |
| AGK86198.1 | KC787108_p17 | protein of an unannotated phage | phrog_106 | minor tail protein | tail | 1 | 15486 | 16658 |
| AGK86239.1 | KC787108_p58 | protein of an unannotated phage | phrog_7328 | unknown function | unknown function | 1 | 38488 | 38730 |
| AGK86189.1 | KC787108_p8 | protein of an unannotated phage | phrog_3101 | unknown function | unknown function | 1 | 8084 | 8311 |
| AGK86207.1 | KC787108_p26 | protein of an unannotated phage | phrog_8517 | unknown function | unknown function | 1 | 23381 | 23575 |
| AGK86235.1 | KC787108_p55 | protein of an unannotated phage | phrog_5935 | unknown function | unknown function | 1 | 37555 | 37839 |
| AGK86202.1 | KC787108_p21 | protein of an unannotated phage | phrog_1736 | minor tail protein | tail | 1 | 20017 | 20451 |
| AGK86186.1 | KC787108_p5 | protein of an unannotated phage | phrog_1757 | unknown function | unknown function | 1 | 6198 | 6404 |
| AGK86196.1 | KC787108_p15 | protein of an unannotated phage | phrog_3656 | tail assembly chaperone | tail | 1 | 11096 | 11473 |
| AGK86233.1 | KC787108_p52 | protein of an unannotated phage | phrog_10006 | unknown function | unknown function | 1 | 36583 | 36741 |
| AGK86203.1 | KC787108_p22 | protein of an unannotated phage | phrog_7565 | minor tail protein | tail | 1 | 20451 | 22586 |
| AGK86234.1 | KC787108_p53 | protein of an unannotated phage | phrog_11054 | unknown function | unknown function | 1 | 36794 | 37045 |
| AGK86217.1 | KC787108_p36 | protein of an unannotated phage | phrog_10116 | unknown function | unknown function | 1 | 29383 | 29565 |
| AGK86229.1 | KC787108_p48 | protein of an unannotated phage | phrog_7576 | unknown function | unknown function | 1 | 35012 | 35452 |
| AGK86224.1 | KC787108_p43 | protein of an unannotated phage | phrog_7227 | unknown function | unknown function | 1 | 33050 | 33583 |
| AGK86200.1 | KC787108_p19 | protein of an unannotated phage | phrog_1697 | minor tail protein | tail | 1 | 18412 | 18873 |
| AGK86191.1 | KC787108_p10 | protein of an unannotated phage | phrog_763 | head-tail adaptor | connector | 1 | 8820 | 9176 |
| AGK86199.1 | KC787108_p18 | protein of an unannotated phage | phrog_110 | minor tail protein | tail | 1 | 16649 | 18412 |
| AGK86205.1 | KC787108_p24 | protein of an unannotated phage | phrog_8923 | unknown function | unknown function | 1 | 22924 | 23106 |
| AGK86228.1 | KC787108_p47 | protein of an unannotated phage | phrog_2247 | unknown function | unknown function | 1 | 34671 | 35015 |
| AGK86220.1 | KC787108_p39 | protein of an unannotated phage | phrog_7392 | unknown function | unknown function | 1 | 30058 | 30408 |
| AGK86182.1 | KC787108_p1 | protein of an unannotated phage | phrog_1459 | terminase small subunit | head and packaging | 1 | 52 | 396 |
| AGK86201.1 | KC787108_p20 | protein of an unannotated phage | phrog_1565 | minor tail protein | tail | 1 | 18870 | 20006 |
| AGK86208.1 | KC787108_p27 | protein of an unannotated phage | phrog_880 | endolysin | lysis | 1 | 23636 | 24952 |
| AGK86214.1 | KC787108_p33 | protein of an unannotated phage | phrog_7506 | recombination directionality factor | integration and excision | 1 | 28132 | 28389 |
| AGK86219.1 | KC787108_p38 | protein of an unannotated phage | phrog_7486 | unknown function | unknown function | 1 | 29909 | 30058 |
| AGK86240.1 | KC787108_p59 | protein of an unannotated phage | phrog_338 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 38754 | 39080 |
| AGK86226.1 | KC787108_p45 | protein of an unannotated phage | phrog_21970 | unknown function | unknown function | 1 | 34175 | 34357 |
| AGK86212.1 | KC787108_p31 | protein of an unannotated phage | phrog_798 | unknown function | unknown function | 1 | 26858 | 27475 |
| AGK86236.1 | KC787108_p54 | protein of an unannotated phage | singleton | unknown function | unknown function | -1 | 37090 | 37578 |
| AGK86215.1 | KC787108_p34 | protein of an unannotated phage | phrog_5081 | unknown function | unknown function | 1 | 28386 | 28784 |
| AGK86216.1 | KC787108_p35 | protein of an unannotated phage | phrog_549 | unknown function | unknown function | 1 | 28847 | 29383 |
| AGK86218.1 | KC787108_p37 | protein of an unannotated phage | phrog_986 | RNA-binding protein | DNA, RNA and nucleotide metabolism | 1 | 29562 | 29912 |
| AGK86237.1 | KC787108_p56 | protein of an unannotated phage | singleton | unknown function | unknown function | 1 | 37839 | 38057 |
| AGK86194.1 | KC787108_p13 | protein of an unannotated phage | phrog_117 | major tail protein | tail | 1 | 9863 | 10477 |
| AGK86195.1 | KC787108_p14 | protein of an unannotated phage | phrog_1861 | unknown function | unknown function | 1 | 10503 | 11087 |
| AGK86192.1 | KC787108_p11 | protein of an unannotated phage | phrog_387 | neck protein | connector | 1 | 9163 | 9426 |
| AGK86197.1 | KC787108_p16 | protein of an unannotated phage | phrog_971 | endolysin | lysis | 1 | 11473 | 15486 |
| AGK86241.1 | KC787108_p60 | protein of an unannotated phage | phrog_3468 | unknown function | unknown function | 1 | 39174 | 39395 |
| AGK86206.1 | KC787108_p25 | protein of an unannotated phage | phrog_9511 | unknown function | unknown function | 1 | 23106 | 23381 |
| AGK86221.1 | KC787108_p40 | protein of an unannotated phage | phrog_6734 | unknown function | unknown function | 1 | 30392 | 30544 |
| AGK86184.1 | KC787108_p3 | protein of an unannotated phage | phrog_104 | portal protein | head and packaging | 1 | 1897 | 3411 |
| AGK86213.1 | KC787108_p32 | protein of an unannotated phage | phrog_216 | integrase | integration and excision | -1 | 27472 | 28113 |
| AGK86185.1 | KC787108_p4 | protein of an unannotated phage | phrog_1752 | head maturation protease | head and packaging | 1 | 3412 | 6201 |
| AGK86209.1 | KC787108_p28 | protein of an unannotated phage | phrog_102 | endolysin | lysis | 1 | 24952 | 26160 |
| AGK86231.1 | KC787108_p50 | protein of an unannotated phage | phrog_13172 | HTH DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 36012 | 36146 |
| AGK86211.1 | KC787108_p30 | protein of an unannotated phage | phrog_1177 | unknown function | unknown function | 1 | 26604 | 26861 |
| AGK86193.1 | KC787108_p12 | protein of an unannotated phage | phrog_123 | tail terminator | connector | 1 | 9423 | 9866 |
| AGK86187.1 | KC787108_p6 | protein of an unannotated phage | phrog_233 | head scaffolding protein | head and packaging | 1 | 6523 | 7065 |
| AGK86183.1 | KC787108_p2 | protein of an unannotated phage | phrog_2 | terminase large subunit | head and packaging | 1 | 368 | 1900 |