| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
KC821616 |
Definition |
Cellulophaga phage phiSM, complete genome. |
Molecule type |
DNA |
Genome structure |
circular |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; unclassified Myoviridae. |
DB of origin |
NUCCORE |
Length |
54566 |
Host Name |
Cellulophaga baltica |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
81 |
%GC |
33.46 |
Number of singletons |
0 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| AGO48229.1 | KC821616_p34 | structural protein | phrog_5226 | unknown function | unknown function | 1 | 29324 | 29827 |
| AGO48228.1 | KC821616_p33 | tail protein | phrog_177 | baseplate hub | tail | 1 | 28303 | 29322 |
| AGO48270.1 | KC821616_p75 | hypothetical protein | phrog_18392 | unknown function | unknown function | -1 | 51761 | 52291 |
| AGO48205.1 | KC821616_p10 | hypothetical protein | phrog_15401 | unknown function | unknown function | 1 | 10540 | 10914 |
| AGO48259.1 | KC821616_p64 | hypothetical protein | phrog_17826 | unknown function | unknown function | -1 | 48106 | 48288 |
| AGO48208.1 | KC821616_p13 | hypothetical protein | phrog_10423 | unknown function | unknown function | 1 | 12244 | 12525 |
| AGO48200.1 | KC821616_p5 | structural protein | phrog_5196 | unknown function | unknown function | 1 | 3671 | 3958 |
| AGO48204.1 | KC821616_p9 | pectate lyase | phrog_10327 | hydrolase | other | 1 | 7154 | 10438 |
| AGO48245.1 | KC821616_p50 | queuosine biosynthesis QueC ATPase | phrog_1550 | QueC-like queuosine biosynthesis | moron, auxiliary metabolic gene and host takeover | -1 | 39477 | 40187 |
| AGO48214.1 | KC821616_p19 | structural protein | phrog_4598 | head closure Hc1 | connector | 1 | 16128 | 16523 |
| AGO48256.1 | KC821616_p61 | hypothetical protein | phrog_18387 | unknown function | unknown function | -1 | 45640 | 45834 |
| AGO48210.1 | KC821616_p15 | Clp protease | phrog_53 | head maturation protease | head and packaging | 1 | 12863 | 14128 |
| AGO48221.1 | KC821616_p26 | structural protein | phrog_180 | baseplate wedge subunit | tail | 1 | 21708 | 22190 |
| AGO48233.1 | KC821616_p38 | hypothetical protein | phrog_18029 | unknown function | unknown function | -1 | 31337 | 32002 |
| AGO48250.1 | KC821616_p55 | hypothetical protein | phrog_15829 | unknown function | unknown function | -1 | 42490 | 43098 |
| AGO48268.1 | KC821616_p73 | hypothetical protein | phrog_17685 | unknown function | unknown function | -1 | 51225 | 51386 |
| AGO48197.1 | KC821616_p2 | hypothetical protein | phrog_6645 | unknown function | unknown function | 1 | 819 | 1337 |
| AGO48251.1 | KC821616_p56 | hypothetical protein | phrog_8580 | unknown function | unknown function | -1 | 43188 | 43373 |
| AGO48212.1 | KC821616_p17 | major capsid protein | phrog_29 | major head protein | head and packaging | 1 | 14541 | 15650 |
| AGO48237.1 | KC821616_p42 | hypothetical protein | phrog_15115 | unknown function | unknown function | -1 | 35413 | 35772 |
| AGO48227.1 | KC821616_p32 | structural protein | phrog_184 | baseplate hub | tail | 1 | 27092 | 28303 |
| AGO48262.1 | KC821616_p67 | hypothetical protein | phrog_18193 | unknown function | unknown function | -1 | 48755 | 49123 |
| AGO48258.1 | KC821616_p63 | hypothetical protein | phrog_17367 | unknown function | unknown function | -1 | 47052 | 48053 |
| AGO48196.1 | KC821616_p1 | hypothetical protein | phrog_5193 | unknown function | unknown function | 1 | 100 | 777 |
| AGO48273.1 | KC821616_p78 | hypothetical protein | phrog_17076 | unknown function | unknown function | -1 | 53012 | 53602 |
| AGO48203.1 | KC821616_p8 | structural protein | phrog_16388 | virion structural protein | head and packaging | 1 | 5907 | 7130 |
| AGO48261.1 | KC821616_p66 | hypothetical protein | phrog_18391 | unknown function | unknown function | -1 | 48577 | 48828 |
| AGO48217.1 | KC821616_p22 | structural protein | phrog_4699 | tail tube protein | tail | 1 | 18672 | 19082 |
| AGO48230.1 | KC821616_p35 | hypothetical protein | phrog_3628 | unknown function | unknown function | -1 | 29814 | 30578 |
| AGO48267.1 | KC821616_p72 | hypothetical protein | phrog_15121 | unknown function | unknown function | -1 | 50896 | 51225 |
| AGO48264.1 | KC821616_p69 | hypothetical protein | phrog_18118 | unknown function | unknown function | -1 | 49281 | 49733 |
| AGO48247.1 | KC821616_p52 | queuosine tRNA-ribosyltransferase | phrog_887 | queuine tRNA-ribosyltransferase | moron, auxiliary metabolic gene and host takeover | -1 | 40649 | 41371 |
| AGO48272.1 | KC821616_p77 | hypothetical protein | phrog_17668 | unknown function | unknown function | -1 | 52540 | 53007 |
| AGO48231.1 | KC821616_p36 | hypothetical protein | phrog_15903 | unknown function | unknown function | -1 | 30651 | 30920 |
| AGO48219.1 | KC821616_p24 | hypothetical protein | phrog_5697 | unknown function | unknown function | 1 | 19561 | 19746 |
| AGO48199.1 | KC821616_p4 | phage terminase large subunit | phrog_15 | terminase large subunit | head and packaging | 1 | 1480 | 3525 |
| AGO48238.1 | KC821616_p43 | hypothetical protein | phrog_18335 | unknown function | unknown function | -1 | 35633 | 35977 |
| AGO48215.1 | KC821616_p20 | structural protein | phrog_4671 | unknown function | unknown function | 1 | 16507 | 17103 |
| AGO48271.1 | KC821616_p76 | hypothetical protein | phrog_16831 | unknown function | unknown function | -1 | 52295 | 52450 |
| AGO48202.1 | KC821616_p7 | structural protein | phrog_15569 | unknown function | unknown function | 1 | 5541 | 5903 |
| AGO48248.1 | KC821616_p53 | hypothetical protein | phrog_16018 | unknown function | unknown function | -1 | 41381 | 42034 |
| AGO48234.1 | KC821616_p39 | helicase | phrog_16 | DNA helicase | DNA, RNA and nucleotide metabolism | -1 | 32002 | 33654 |
| AGO48236.1 | KC821616_p41 | hypothetical protein | phrog_15333 | unknown function | unknown function | -1 | 34866 | 35420 |
| AGO48269.1 | KC821616_p74 | hypothetical protein | phrog_18150 | unknown function | unknown function | -1 | 51356 | 51670 |
| AGO48276.1 | KC821616_p81 | hypothetical protein | phrog_17066 | unknown function | unknown function | -1 | 54416 | 54520 |
| AGO48206.1 | KC821616_p11 | hypothetical protein | phrog_10199 | unknown function | unknown function | 1 | 10999 | 11634 |
| AGO48239.1 | KC821616_p44 | hypothetical protein | phrog_16181 | unknown function | unknown function | -1 | 35913 | 36086 |
| AGO48242.1 | KC821616_p47 | hypothetical protein | phrog_15235 | unknown function | unknown function | -1 | 38117 | 38293 |
| AGO48240.1 | KC821616_p45 | Vir E/ primase domain containing protein | phrog_14787 | unknown function | unknown function | -1 | 36159 | 37058 |
| AGO48255.1 | KC821616_p60 | VirE | phrog_1313 | DNA helicase | DNA, RNA and nucleotide metabolism | -1 | 44413 | 45639 |
| AGO48218.1 | KC821616_p23 | hypothetical protein | phrog_4648 | unknown function | unknown function | 1 | 19148 | 19576 |
| AGO48263.1 | KC821616_p68 | hypothetical protein | phrog_16898 | unknown function | unknown function | -1 | 49104 | 49277 |
| AGO48220.1 | KC821616_p25 | tail length tape-measure protein | phrog_28 | tail length tape measure protein | tail | 1 | 19747 | 21693 |
| AGO48223.1 | KC821616_p28 | tail protein | phrog_4920 | unknown function | unknown function | 1 | 23365 | 24126 |
| AGO48246.1 | KC821616_p51 | ParB-like nuclease domain containing protein | phrog_16545 | ParB-like partition protein | DNA, RNA and nucleotide metabolism | -1 | 40197 | 40661 |
| AGO48216.1 | KC821616_p21 | tail sheat protein | phrog_165 | tail sheath | tail | 1 | 17123 | 18649 |
| AGO48225.1 | KC821616_p30 | structural protein | phrog_5221 | unknown function | unknown function | 1 | 25173 | 26351 |
| AGO48224.1 | KC821616_p29 | structural protein | phrog_5194 | unknown function | unknown function | 1 | 24131 | 25162 |
| AGO48249.1 | KC821616_p54 | Que F, NADPH-dependent 7-cyano-7-deazaguanine reductase | phrog_5949 | GTP cyclohydrolase | other | -1 | 42087 | 42488 |
| AGO48211.1 | KC821616_p16 | structural protein | phrog_5204 | head decoration | head and packaging | 1 | 14132 | 14572 |
| AGO48201.1 | KC821616_p6 | phage portal protein | phrog_21 | portal protein | head and packaging | 1 | 3962 | 5572 |
| AGO48198.1 | KC821616_p3 | hypothetical protein | phrog_16634 | unknown function | unknown function | 1 | 1340 | 1483 |
| AGO48241.1 | KC821616_p46 | DNA polymerase III subunit beta | phrog_947 | DNA polymerase processivity factor | DNA, RNA and nucleotide metabolism | -1 | 37045 | 38127 |
| AGO48222.1 | KC821616_p27 | baseplate J-like protein | phrog_6 | baseplate wedge subunit | tail | 1 | 22190 | 23365 |
| AGO48207.1 | KC821616_p12 | L-alanoyl-D-glutamate peptidase | phrog_465 | endolysin | lysis | 1 | 11621 | 12247 |
| AGO48209.1 | KC821616_p14 | hypothetical protein | phrog_10645 | unknown function | unknown function | 1 | 12428 | 12796 |
| AGO48260.1 | KC821616_p65 | hypothetical protein | phrog_17543 | unknown function | unknown function | -1 | 48290 | 48580 |
| AGO48244.1 | KC821616_p49 | queuosine biosynthesis QueD, PTPS-I | phrog_2389 | QueD-like 6-pyruvoyl-tetrahydropterin synthase | moron, auxiliary metabolic gene and host takeover | -1 | 38993 | 39484 |
| AGO48243.1 | KC821616_p48 | queuosine biosynthesis QueE radical SAM | phrog_2076 | QueE-like radical SAM domain | moron, auxiliary metabolic gene and host takeover | -1 | 38293 | 39009 |
| AGO48275.1 | KC821616_p80 | hypothetical protein | phrog_18410 | unknown function | unknown function | -1 | 53910 | 54086 |
| AGO48235.1 | KC821616_p40 | exonuclease | phrog_149 | exonuclease | DNA, RNA and nucleotide metabolism | -1 | 33846 | 34865 |
| AGO48213.1 | KC821616_p18 | hypothetical protein | phrog_15308 | unknown function | unknown function | 1 | 15702 | 16127 |
| AGO48232.1 | KC821616_p37 | hypothetical protein | phrog_14845 | unknown function | unknown function | -1 | 30902 | 31330 |
| AGO48226.1 | KC821616_p31 | structural protein | phrog_4688 | minor tail protein | tail | 1 | 26352 | 27095 |
| AGO48257.1 | KC821616_p62 | hypothetical protein | phrog_6247 | DNA topoisomerase | DNA, RNA and nucleotide metabolism | -1 | 45858 | 46880 |
| AGO48254.1 | KC821616_p59 | hypothetical protein | phrog_10144 | unknown function | unknown function | -1 | 44167 | 44322 |
| AGO48265.1 | KC821616_p70 | hypothetical protein | phrog_36750 | unknown function | unknown function | -1 | 49820 | 50137 |
| AGO48252.1 | KC821616_p57 | GTP cyclohydrolase I | phrog_2197 | GTP cyclohydrolase | other | -1 | 43373 | 44032 |
| AGO48274.1 | KC821616_p79 | hypothetical protein | phrog_16656 | unknown function | unknown function | -1 | 53607 | 53888 |
| AGO48253.1 | KC821616_p58 | hypothetical protein | phrog_18234 | unknown function | unknown function | -1 | 44038 | 44154 |
| AGO48266.1 | KC821616_p71 | hypothetical protein | phrog_17332 | unknown function | unknown function | -1 | 50244 | 50909 |