Genomic map of Cellulophaga phage phiSM (KC821616)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
KC821616
Definition
Cellulophaga phage phiSM, complete genome.
Molecule type
DNA
Genome structure
circular
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; unclassified Myoviridae.
DB of origin
NUCCORE
Length
54566
Host Name
Cellulophaga baltica
Host domain
Bacteria
Is prophage?
undef
Number of proteins
81
%GC
33.46
Number of singletons
0
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
AGO48229.1 KC821616_p34 structural protein phrog_5226 unknown function unknown function 1 29324 29827
AGO48228.1 KC821616_p33 tail protein phrog_177 baseplate hub tail 1 28303 29322
AGO48270.1 KC821616_p75 hypothetical protein phrog_18392 unknown function unknown function -1 51761 52291
AGO48205.1 KC821616_p10 hypothetical protein phrog_15401 unknown function unknown function 1 10540 10914
AGO48259.1 KC821616_p64 hypothetical protein phrog_17826 unknown function unknown function -1 48106 48288
AGO48208.1 KC821616_p13 hypothetical protein phrog_10423 unknown function unknown function 1 12244 12525
AGO48200.1 KC821616_p5 structural protein phrog_5196 unknown function unknown function 1 3671 3958
AGO48204.1 KC821616_p9 pectate lyase phrog_10327 hydrolase other 1 7154 10438
AGO48245.1 KC821616_p50 queuosine biosynthesis QueC ATPase phrog_1550 QueC-like queuosine biosynthesis moron, auxiliary metabolic gene and host takeover -1 39477 40187
AGO48214.1 KC821616_p19 structural protein phrog_4598 head closure Hc1 connector 1 16128 16523
AGO48256.1 KC821616_p61 hypothetical protein phrog_18387 unknown function unknown function -1 45640 45834
AGO48210.1 KC821616_p15 Clp protease phrog_53 head maturation protease head and packaging 1 12863 14128
AGO48221.1 KC821616_p26 structural protein phrog_180 baseplate wedge subunit tail 1 21708 22190
AGO48233.1 KC821616_p38 hypothetical protein phrog_18029 unknown function unknown function -1 31337 32002
AGO48250.1 KC821616_p55 hypothetical protein phrog_15829 unknown function unknown function -1 42490 43098
AGO48268.1 KC821616_p73 hypothetical protein phrog_17685 unknown function unknown function -1 51225 51386
AGO48197.1 KC821616_p2 hypothetical protein phrog_6645 unknown function unknown function 1 819 1337
AGO48251.1 KC821616_p56 hypothetical protein phrog_8580 unknown function unknown function -1 43188 43373
AGO48212.1 KC821616_p17 major capsid protein phrog_29 major head protein head and packaging 1 14541 15650
AGO48237.1 KC821616_p42 hypothetical protein phrog_15115 unknown function unknown function -1 35413 35772
AGO48227.1 KC821616_p32 structural protein phrog_184 baseplate hub tail 1 27092 28303
AGO48262.1 KC821616_p67 hypothetical protein phrog_18193 unknown function unknown function -1 48755 49123
AGO48258.1 KC821616_p63 hypothetical protein phrog_17367 unknown function unknown function -1 47052 48053
AGO48196.1 KC821616_p1 hypothetical protein phrog_5193 unknown function unknown function 1 100 777
AGO48273.1 KC821616_p78 hypothetical protein phrog_17076 unknown function unknown function -1 53012 53602
AGO48203.1 KC821616_p8 structural protein phrog_16388 virion structural protein head and packaging 1 5907 7130
AGO48261.1 KC821616_p66 hypothetical protein phrog_18391 unknown function unknown function -1 48577 48828
AGO48217.1 KC821616_p22 structural protein phrog_4699 tail tube protein tail 1 18672 19082
AGO48230.1 KC821616_p35 hypothetical protein phrog_3628 unknown function unknown function -1 29814 30578
AGO48267.1 KC821616_p72 hypothetical protein phrog_15121 unknown function unknown function -1 50896 51225
AGO48264.1 KC821616_p69 hypothetical protein phrog_18118 unknown function unknown function -1 49281 49733
AGO48247.1 KC821616_p52 queuosine tRNA-ribosyltransferase phrog_887 queuine tRNA-ribosyltransferase moron, auxiliary metabolic gene and host takeover -1 40649 41371
AGO48272.1 KC821616_p77 hypothetical protein phrog_17668 unknown function unknown function -1 52540 53007
AGO48231.1 KC821616_p36 hypothetical protein phrog_15903 unknown function unknown function -1 30651 30920
AGO48219.1 KC821616_p24 hypothetical protein phrog_5697 unknown function unknown function 1 19561 19746
AGO48199.1 KC821616_p4 phage terminase large subunit phrog_15 terminase large subunit head and packaging 1 1480 3525
AGO48238.1 KC821616_p43 hypothetical protein phrog_18335 unknown function unknown function -1 35633 35977
AGO48215.1 KC821616_p20 structural protein phrog_4671 unknown function unknown function 1 16507 17103
AGO48271.1 KC821616_p76 hypothetical protein phrog_16831 unknown function unknown function -1 52295 52450
AGO48202.1 KC821616_p7 structural protein phrog_15569 unknown function unknown function 1 5541 5903
AGO48248.1 KC821616_p53 hypothetical protein phrog_16018 unknown function unknown function -1 41381 42034
AGO48234.1 KC821616_p39 helicase phrog_16 DNA helicase DNA, RNA and nucleotide metabolism -1 32002 33654
AGO48236.1 KC821616_p41 hypothetical protein phrog_15333 unknown function unknown function -1 34866 35420
AGO48269.1 KC821616_p74 hypothetical protein phrog_18150 unknown function unknown function -1 51356 51670
AGO48276.1 KC821616_p81 hypothetical protein phrog_17066 unknown function unknown function -1 54416 54520
AGO48206.1 KC821616_p11 hypothetical protein phrog_10199 unknown function unknown function 1 10999 11634
AGO48239.1 KC821616_p44 hypothetical protein phrog_16181 unknown function unknown function -1 35913 36086
AGO48242.1 KC821616_p47 hypothetical protein phrog_15235 unknown function unknown function -1 38117 38293
AGO48240.1 KC821616_p45 Vir E/ primase domain containing protein phrog_14787 unknown function unknown function -1 36159 37058
AGO48255.1 KC821616_p60 VirE phrog_1313 DNA helicase DNA, RNA and nucleotide metabolism -1 44413 45639
AGO48218.1 KC821616_p23 hypothetical protein phrog_4648 unknown function unknown function 1 19148 19576
AGO48263.1 KC821616_p68 hypothetical protein phrog_16898 unknown function unknown function -1 49104 49277
AGO48220.1 KC821616_p25 tail length tape-measure protein phrog_28 tail length tape measure protein tail 1 19747 21693
AGO48223.1 KC821616_p28 tail protein phrog_4920 unknown function unknown function 1 23365 24126
AGO48246.1 KC821616_p51 ParB-like nuclease domain containing protein phrog_16545 ParB-like partition protein DNA, RNA and nucleotide metabolism -1 40197 40661
AGO48216.1 KC821616_p21 tail sheat protein phrog_165 tail sheath tail 1 17123 18649
AGO48225.1 KC821616_p30 structural protein phrog_5221 unknown function unknown function 1 25173 26351
AGO48224.1 KC821616_p29 structural protein phrog_5194 unknown function unknown function 1 24131 25162
AGO48249.1 KC821616_p54 Que F, NADPH-dependent 7-cyano-7-deazaguanine reductase phrog_5949 GTP cyclohydrolase other -1 42087 42488
AGO48211.1 KC821616_p16 structural protein phrog_5204 head decoration head and packaging 1 14132 14572
AGO48201.1 KC821616_p6 phage portal protein phrog_21 portal protein head and packaging 1 3962 5572
AGO48198.1 KC821616_p3 hypothetical protein phrog_16634 unknown function unknown function 1 1340 1483
AGO48241.1 KC821616_p46 DNA polymerase III subunit beta phrog_947 DNA polymerase processivity factor DNA, RNA and nucleotide metabolism -1 37045 38127
AGO48222.1 KC821616_p27 baseplate J-like protein phrog_6 baseplate wedge subunit tail 1 22190 23365
AGO48207.1 KC821616_p12 L-alanoyl-D-glutamate peptidase phrog_465 endolysin lysis 1 11621 12247
AGO48209.1 KC821616_p14 hypothetical protein phrog_10645 unknown function unknown function 1 12428 12796
AGO48260.1 KC821616_p65 hypothetical protein phrog_17543 unknown function unknown function -1 48290 48580
AGO48244.1 KC821616_p49 queuosine biosynthesis QueD, PTPS-I phrog_2389 QueD-like 6-pyruvoyl-tetrahydropterin synthase moron, auxiliary metabolic gene and host takeover -1 38993 39484
AGO48243.1 KC821616_p48 queuosine biosynthesis QueE radical SAM phrog_2076 QueE-like radical SAM domain moron, auxiliary metabolic gene and host takeover -1 38293 39009
AGO48275.1 KC821616_p80 hypothetical protein phrog_18410 unknown function unknown function -1 53910 54086
AGO48235.1 KC821616_p40 exonuclease phrog_149 exonuclease DNA, RNA and nucleotide metabolism -1 33846 34865
AGO48213.1 KC821616_p18 hypothetical protein phrog_15308 unknown function unknown function 1 15702 16127
AGO48232.1 KC821616_p37 hypothetical protein phrog_14845 unknown function unknown function -1 30902 31330
AGO48226.1 KC821616_p31 structural protein phrog_4688 minor tail protein tail 1 26352 27095
AGO48257.1 KC821616_p62 hypothetical protein phrog_6247 DNA topoisomerase DNA, RNA and nucleotide metabolism -1 45858 46880
AGO48254.1 KC821616_p59 hypothetical protein phrog_10144 unknown function unknown function -1 44167 44322
AGO48265.1 KC821616_p70 hypothetical protein phrog_36750 unknown function unknown function -1 49820 50137
AGO48252.1 KC821616_p57 GTP cyclohydrolase I phrog_2197 GTP cyclohydrolase other -1 43373 44032
AGO48274.1 KC821616_p79 hypothetical protein phrog_16656 unknown function unknown function -1 53607 53888
AGO48253.1 KC821616_p58 hypothetical protein phrog_18234 unknown function unknown function -1 44038 44154
AGO48266.1 KC821616_p71 hypothetical protein phrog_17332 unknown function unknown function -1 50244 50909