Genomic map of Cellulophaga phage phi13:1 (KC821625)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
KC821625
Definition
Cellulophaga phage phi13:1, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Cbastvirus; Cellulophaga virus ST; Cellulophaga phage phiST.
DB of origin
PVOG
Length
76666
Host Name
Cellulophaga baltica
Host domain
Bacteria
Is prophage?
undef
Number of proteins
104
%GC
30.22
Number of singletons
3
Number of paralogs
2

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
AGO49091.1 KC821625_p80 structural protein phrog_11226 portal protein head and packaging 1 65382 66545
AGO49032.1 KC821625_p21 structural protein phrog_20525 virion structural protein head and packaging 1 18174 19160
AGO49080.1 KC821625_p69 DNA primase/helicase/ VirE phrog_18375 DNA primase/helicase DNA, RNA and nucleotide metabolism 1 56463 58397
AGO49067.1 KC821625_p56 hypothetical protein phrog_21574 unknown function unknown function 1 47056 47433
AGO49049.1 KC821625_p38 DNA polymerase III alpha subunit phrog_13169 DNA polymerase DNA, RNA and nucleotide metabolism 1 31606 33183
AGO49039.1 KC821625_p28 hypothetical protein phrog_20279 unknown function unknown function 1 25465 25953
AGO49072.1 KC821625_p61 ribonucleoside-diphosphate reductase large subunit phrog_84 ribonucleoside-diphosphate reductase large subunit DNA, RNA and nucleotide metabolism 1 49917 52286
AGO49073.1 KC821625_p62 DNA binding protein phrog_379 DNA binding protein DNA, RNA and nucleotide metabolism 1 52337 52717
AGO49045.1 KC821625_p34 hypothetical protein phrog_17812 unknown function unknown function 1 29650 29997
AGO49070.1 KC821625_p59 hypothetical protein phrog_139 deoxynucleoside monophosphate kinase other 1 48626 49234
AGO49020.1 KC821625_p9 hypothetical protein phrog_21560 unknown function unknown function 1 4496 5017
AGO49092.1 KC821625_p81 structural protein phrog_21325 virion structural protein head and packaging 1 66538 67038
AGO49038.1 KC821625_p27 D-alanyl-D-alanine carboxypeptidase phrog_465 endolysin lysis 1 24959 25378
AGO49061.1 KC821625_p50 structural protein phrog_21065 virion structural protein head and packaging 1 41754 42032
AGO49029.1 KC821625_p18 structural protein phrog_19401 virion structural protein head and packaging 1 11507 13990
AGO49062.1 KC821625_p51 hypothetical protein phrog_20145 unknown function unknown function 1 42025 42321
AGO49053.1 KC821625_p42 hypothetical protein phrog_21329 unknown function unknown function 1 36577 36801
AGO49027.1 KC821625_p16 structural protein phrog_12067 virion structural protein head and packaging 1 9477 10529
AGO49065.1 KC821625_p54 hypothetical protein phrog_20292 unknown function unknown function 1 45068 45370
AGO49098.1 KC821625_p87 hypothetical protein phrog_19052 unknown function unknown function 1 69444 69602
AGO49100.1 KC821625_p89 hypothetical protein singleton unknown function unknown function 1 70083 70244
AGO49058.1 KC821625_p47 metallophosphatase phrog_100 SbcD-like subunit of palindrome specific endonuclease DNA, RNA and nucleotide metabolism 1 39139 40164
AGO49055.1 KC821625_p44 hypothetical protein phrog_19869 unknown function unknown function 1 37361 37687
AGO49084.1 KC821625_p73 hypothetical protein phrog_21120 unknown function unknown function 1 59924 60352
AGO49112.1 KC821625_p101 hypothetical protein phrog_21272 unknown function unknown function 1 75480 75635
AGO49114.1 KC821625_p103 hypothetical protein phrog_19240 unknown function unknown function -1 76019 76216
AGO49087.1 KC821625_p76 hypothetical protein phrog_26637 unknown function unknown function 1 63447 63590
AGO49064.1 KC821625_p53 hypothetical protein phrog_1770 Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 44481 45065
AGO49115.1 KC821625_p104 hypothetical protein phrog_20997 unknown function unknown function -1 76293 76511
AGO49035.1 KC821625_p24 SGNH hydrolase phrog_10327 hydrolase other 1 20439 24176
AGO49103.1 KC821625_p92 hypothetical protein phrog_20459 unknown function unknown function 1 70767 70958
AGO49043.1 KC821625_p32 GTP cyclohydrolase I phrog_2197 GTP cyclohydrolase other 1 28406 29110
AGO49044.1 KC821625_p33 nucleoside triphosphate pyrophosphohydrolase phrog_229 MazG-like pyrophosphatase other 1 29073 29660
AGO49082.1 KC821625_p71 hypothetical protein phrog_21601 unknown function unknown function 1 58667 59092
AGO49026.1 KC821625_p15 structural protein phrog_19691 virion structural protein head and packaging 1 7573 9453
AGO49048.1 KC821625_p37 hypothetical protein phrog_21571 unknown function unknown function 1 31285 31488
AGO49034.1 KC821625_p23 structural protein phrog_21447 virion structural protein head and packaging 1 19940 20428
AGO49110.1 KC821625_p99 hypothetical protein phrog_13655 unknown function unknown function 1 73914 74081
AGO49013.1 KC821625_p2 hypothetical protein phrog_21684 unknown function unknown function -1 940 1560
AGO49017.1 KC821625_p6 hypothetical protein phrog_21895 unknown function unknown function -1 2926 3099
AGO49088.1 KC821625_p77 thymidylate synthase complementing protein phrog_85 thymidylate synthase DNA, RNA and nucleotide metabolism 1 63605 64609
AGO49021.1 KC821625_p10 hypothetical protein phrog_19423 unknown function unknown function 1 5312 6055
AGO49056.1 KC821625_p45 hypothetical protein phrog_19605 unknown function unknown function 1 37767 38681
AGO49066.1 KC821625_p55 helicase phrog_62 DNA helicase DNA, RNA and nucleotide metabolism 1 45372 47051
AGO49096.1 KC821625_p85 hypothetical protein phrog_11666 unknown function unknown function 1 68976 69134
AGO49047.1 KC821625_p36 hypothetical protein phrog_20335 unknown function unknown function 1 30456 31235
AGO49106.1 KC821625_p95 hypothetical protein phrog_21048 unknown function unknown function 1 71956 72165
AGO49071.1 KC821625_p60 hypothetical protein phrog_21104 unknown function unknown function 1 49266 49913
AGO49097.1 KC821625_p86 hypothetical protein phrog_21228 unknown function unknown function 1 69121 69270
AGO49012.1 KC821625_p1 hypothetical protein phrog_10144 unknown function unknown function -1 680 835
AGO49016.1 KC821625_p5 hypothetical protein phrog_20185 unknown function unknown function -1 2549 2845
AGO49028.1 KC821625_p17 structural protein phrog_12067 virion structural protein head and packaging 1 10526 11506
AGO49051.1 KC821625_p40 ATP dependent DNA ligase phrog_114 ATP-dependent DNA ligase DNA, RNA and nucleotide metabolism 1 35311 36375
AGO49069.1 KC821625_p58 phosphoribosyl transferase phrog_8995 phosphoribosyl transferase other 1 48190 48618
AGO49074.1 KC821625_p63 A1-like protein phrog_1745 DNA transfer protein other 1 52717 54342
AGO49076.1 KC821625_p65 hypothetical protein phrog_20056 unknown function unknown function 1 54894 55046
AGO49083.1 KC821625_p72 hypothetical protein phrog_20924 unknown function unknown function 1 59188 59748
AGO49077.1 KC821625_p66 hypothetical protein phrog_19356 unknown function unknown function 1 55103 55321
AGO49054.1 KC821625_p43 hypothetical protein phrog_20212 unknown function unknown function 1 36820 37359
AGO49014.1 KC821625_p3 hypothetical protein phrog_19671 unknown function unknown function -1 1517 1822
AGO49102.1 KC821625_p91 hypothetical protein phrog_18929 unknown function unknown function 1 70434 70709
AGO49022.1 KC821625_p11 hypothetical protein phrog_20921 unknown function unknown function 1 6073 6522
AGO49095.1 KC821625_p84 phage terminase large subunit phrog_2 terminase large subunit head and packaging 1 67641 68897
AGO49042.1 KC821625_p31 queuosine biosynthesis QueE radical SAM phrog_2076 QueE-like radical SAM domain moron, auxiliary metabolic gene and host takeover 1 27593 28390
AGO49033.1 KC821625_p22 structural protein phrog_19979 virion structural protein head and packaging 1 19231 19803
AGO49037.1 KC821625_p26 cupin domain containing protein phrog_19130 unknown function unknown function 1 24513 24944
AGO49018.1 KC821625_p7 hypothetical protein phrog_3032 unknown function unknown function -1 3677 4003
AGO49050.1 KC821625_p39 DNA polymerase III alpha subunit phrog_12219 DNA polymerase DNA, RNA and nucleotide metabolism 1 33185 35206
AGO49024.1 KC821625_p13 hypothetical protein phrog_21534 unknown function unknown function 1 6962 7411
AGO49041.1 KC821625_p30 queuosine biosynthesis QueD, PTPS-I phrog_2389 QueD-like 6-pyruvoyl-tetrahydropterin synthase moron, auxiliary metabolic gene and host takeover 1 26995 27624
AGO49111.1 KC821625_p100 hypothetical protein phrog_19092 unknown function unknown function 1 74243 74524
AGO49081.1 KC821625_p70 hypothetical protein phrog_20977 unknown function unknown function 1 58467 58667
AGO49025.1 KC821625_p14 hypothetical protein phrog_27568 unknown function unknown function 1 7424 7567
AGO49052.1 KC821625_p41 hypothetical protein singleton unknown function unknown function 1 36415 36561
AGO49023.1 KC821625_p12 structural protein phrog_20013 virion structural protein head and packaging 1 6519 6965
AGO49104.1 KC821625_p93 hypothetical protein phrog_12560 unknown function unknown function 1 70984 71409
AGO49108.1 KC821625_p97 hypothetical protein phrog_10841 unknown function unknown function 1 72748 73134
AGO49109.1 KC821625_p98 hypothetical protein phrog_10841 unknown function unknown function 1 73127 73705
AGO49015.1 KC821625_p4 hypothetical protein phrog_20063 unknown function unknown function -1 1846 2217
AGO49075.1 KC821625_p64 hypothetical protein phrog_20338 unknown function unknown function 1 54461 54889
AGO49085.1 KC821625_p74 hypothetical protein phrog_21476 unknown function unknown function 1 60378 60833
AGO49113.1 KC821625_p102 hypothetical protein phrog_19986 unknown function unknown function -1 75819 75947
AGO49079.1 KC821625_p68 hypothetical protein phrog_355 nucleoside 2-deoxyribosyltransferase DNA, RNA and nucleotide metabolism 1 56136 56456
AGO49031.1 KC821625_p20 tail protein phrog_20705 virion structural protein head and packaging 1 16044 18110
AGO49060.1 KC821625_p49 hypothetical protein phrog_20748 unknown function unknown function 1 41175 41654
AGO49068.1 KC821625_p57 Rnase H phrog_531 Rnase H DNA, RNA and nucleotide metabolism 1 47660 48193
AGO49040.1 KC821625_p29 DEDDh exonuclease phrog_192 DNA polymerase exonuclease subunit DNA, RNA and nucleotide metabolism 1 26060 26983
AGO49101.1 KC821625_p90 hypothetical protein singleton unknown function unknown function 1 70183 70437
AGO49078.1 KC821625_p67 hypothetical protein phrog_20827 unknown function unknown function 1 55338 56096
AGO49030.1 KC821625_p19 structural protein phrog_21537 virion structural protein head and packaging 1 13993 16041
AGO49046.1 KC821625_p35 ATPase containing protein phrog_19196 unknown function unknown function 1 29957 30454
AGO49094.1 KC821625_p83 hypothetical protein phrog_19451 unknown function unknown function 1 67222 67629
AGO49086.1 KC821625_p75 DNA-dependent RNA polymerase phrog_414 RNA polymerase DNA, RNA and nucleotide metabolism 1 60941 63310
AGO49019.1 KC821625_p8 hypothetical protein phrog_19176 unknown function unknown function -1 4013 4267
AGO49063.1 KC821625_p52 nucleoside triphosphate hydrolase phrog_77 SbcC-like subunit of palindrome specific endonuclease DNA, RNA and nucleotide metabolism 1 42318 44480
AGO49059.1 KC821625_p48 recombinase A phrog_97 UvsX-like recombinase other 1 40165 41136
AGO49090.1 KC821625_p79 hypothetical protein phrog_19317 unknown function unknown function 1 65072 65332
AGO49099.1 KC821625_p88 hypothetical protein phrog_21778 unknown function unknown function 1 69825 69992
AGO49107.1 KC821625_p96 hypothetical protein phrog_18931 unknown function unknown function 1 72218 72367
AGO49089.1 KC821625_p78 hypothetical protein phrog_21237 unknown function unknown function 1 64599 64880
AGO49093.1 KC821625_p82 hypothetical protein phrog_20967 unknown function unknown function 1 67044 67244
AGO49105.1 KC821625_p94 hypothetical protein phrog_6645 unknown function unknown function 1 71411 71803
AGO49057.1 KC821625_p46 hypothetical protein phrog_20089 unknown function unknown function 1 38738 39139
AGO49036.1 KC821625_p25 hypothetical protein phrog_18940 unknown function unknown function 1 24221 24529