Genomic map of Alteromonas phage vB_AmaP_AD45-P3 (KF005318)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
KF005318
Definition
Alteromonas phage vB_AmaP_AD45-P3, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae; unclassified Podoviridae.
DB of origin
PVOG
Length
101724
Host Name
Alteromonas macleodii
Host domain
Bacteria
Is prophage?
undef
Number of proteins
117
%GC
43.15
Number of singletons
2
Number of paralogs
1

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
AGM46977.1 KF005318_p39 hypothetical protein phrog_23064 unknown function unknown function 1 38980 39279
AGM46949.1 KF005318_p11 hypothetical protein phrog_26806 unknown function unknown function -1 15435 15728
AGM46987.1 KF005318_p49 hypothetical protein phrog_289 GTP-binding domain other 1 44496 44924
AGM47038.1 KF005318_p100 hypothetical protein phrog_2872 Sak4-like ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 75942 76403
AGM47004.1 KF005318_p66 hypothetical protein phrog_23166 unknown function unknown function 1 55732 55944
AGM46940.1 KF005318_p2 hypothetical protein phrog_26112 unknown function unknown function -1 1127 1627
AGM47036.1 KF005318_p98 hypothetical protein phrog_31418 unknown function unknown function 1 74745 75122
AGM46970.1 KF005318_p32 hypothetical protein phrog_27018 unknown function unknown function 1 36220 36438
AGM47039.1 KF005318_p101 hypothetical protein phrog_26880 unknown function unknown function 1 76517 76717
AGM46965.1 KF005318_p27 hypothetical protein phrog_26392 unknown function unknown function -1 33153 33848
AGM47050.1 KF005318_p112 hypothetical protein phrog_474 phosphofructokinase other 1 86569 86865
AGM47052.1 KF005318_p114 hypothetical protein phrog_26883 unknown function unknown function 1 87444 88016
AGM47007.1 KF005318_p69 hypothetical protein phrog_27906 unknown function unknown function 1 56378 56662
AGM46944.1 KF005318_p6 tail protein Pb4 phrog_23593 tail protein tail -1 5296 11901
AGM46986.1 KF005318_p48 hypothetical protein phrog_22720 unknown function unknown function 1 44115 44438
AGM47000.1 KF005318_p62 hypothetical protein phrog_2638 unknown function unknown function 1 54006 54335
AGM46989.1 KF005318_p51 hypothetical protein phrog_1314 HNH endonuclease DNA, RNA and nucleotide metabolism 1 45739 47061
AGM47051.1 KF005318_p113 hypothetical protein phrog_94 head maturation protease head and packaging 1 86858 87451
AGM46956.1 KF005318_p18 hypothetical protein phrog_26746 unknown function unknown function -1 20020 20763
AGM47003.1 KF005318_p65 hypothetical protein phrog_24049 unknown function unknown function 1 55166 55615
AGM46957.1 KF005318_p19 hypothetical protein phrog_27370 unknown function unknown function -1 20763 25400
AGM47010.1 KF005318_p72 hypothetical protein phrog_35568 unknown function unknown function 1 57210 57512
AGM47055.1 KF005318_p117 hypothetical protein phrog_24526 unknown function unknown function -1 100761 101724
AGM46980.1 KF005318_p42 hypothetical protein phrog_22408 unknown function unknown function 1 40571 40795
AGM46968.1 KF005318_p30 hypothetical protein phrog_23019 unknown function unknown function 1 35232 35465
AGM46963.1 KF005318_p25 hypothetical protein phrog_25400 unknown function unknown function -1 32399 32785
AGM46955.1 KF005318_p17 hypothetical protein phrog_24079 unknown function unknown function -1 19567 19962
AGM46992.1 KF005318_p54 hypothetical protein phrog_2018 unknown function unknown function 1 50413 50796
AGM47029.1 KF005318_p91 hypothetical protein phrog_25077 unknown function unknown function 1 67596 67862
AGM47025.1 KF005318_p87 hypothetical protein phrog_19902 HNH endonuclease DNA, RNA and nucleotide metabolism 1 64895 65560
AGM47024.1 KF005318_p86 thymidylate synthase phrog_23580 thymidylate synthase DNA, RNA and nucleotide metabolism 1 64292 64828
AGM46972.1 KF005318_p34 hypothetical protein phrog_22828 unknown function unknown function 1 36722 36988
AGM46985.1 KF005318_p47 hypothetical protein phrog_314 homing endonuclease DNA, RNA and nucleotide metabolism 1 43349 44125
AGM46941.1 KF005318_p3 hypothetical protein phrog_25216 unknown function unknown function -1 1691 3601
AGM47032.1 KF005318_p94 hypothetical protein phrog_3108 unknown function unknown function 1 69636 70124
AGM46983.1 KF005318_p45 hypothetical protein phrog_25881 unknown function unknown function 1 41833 42087
AGM46948.1 KF005318_p10 hypothetical protein phrog_2120 tail length tape measure protein tail -1 14179 15423
AGM47034.1 KF005318_p96 hypothetical protein phrog_2135 DNA primase DNA, RNA and nucleotide metabolism 1 70406 72667
AGM47037.1 KF005318_p99 hypothetical protein phrog_69 exonuclease DNA, RNA and nucleotide metabolism 1 75101 75937
AGM46969.1 KF005318_p31 hypothetical protein phrog_22287 unknown function unknown function 1 35648 35878
AGM47002.1 KF005318_p64 hypothetical protein phrog_26801 unknown function unknown function 1 54841 55206
AGM46971.1 KF005318_p33 hypothetical protein phrog_26513 unknown function unknown function 1 36429 36719
AGM47006.1 KF005318_p68 hypothetical protein phrog_28284 unknown function unknown function 1 56182 56394
AGM47042.1 KF005318_p104 hypothetical protein phrog_743 single strand DNA binding protein DNA, RNA and nucleotide metabolism 1 77717 78412
AGM47031.1 KF005318_p93 hypothetical protein phrog_7111 unknown function unknown function 1 69049 69636
AGM47015.1 KF005318_p77 hypothetical protein phrog_23300 unknown function unknown function 1 59532 59993
AGM46958.1 KF005318_p20 tail fiber phrog_22284 tail fiber protein tail -1 25409 29119
AGM47035.1 KF005318_p97 rIIA protein phrog_24904 RIIA lysis inhibitor lysis 1 72683 74770
AGM46962.1 KF005318_p24 hypothetical protein phrog_23425 unknown function unknown function -1 32200 32409
AGM47040.1 KF005318_p102 hypothetical protein phrog_24910 unknown function unknown function 1 76836 77345
AGM46998.1 KF005318_p60 hypothetical protein phrog_26871 unknown function unknown function 1 53116 53361
AGM46959.1 KF005318_p21 30 kDa protein phrog_2125 virion structural protein head and packaging -1 29119 29736
AGM46979.1 KF005318_p41 hypothetical protein phrog_22535 unknown function unknown function 1 39875 40525
AGM47053.1 KF005318_p115 hypothetical protein phrog_26075 unknown function unknown function 1 88020 88295
AGM47047.1 KF005318_p109 hypothetical protein phrog_1682 RusA-like Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 83436 83846
AGM46966.1 KF005318_p28 hypothetical protein phrog_26839 unknown function unknown function -1 33913 34248
AGM47048.1 KF005318_p110 ribonucleotide-diphosphate reductase subunit alpha phrog_84 ribonucleoside-diphosphate reductase large subunit DNA, RNA and nucleotide metabolism 1 83840 85561
AGM46964.1 KF005318_p26 hypothetical protein phrog_23395 unknown function unknown function -1 32971 33177
AGM47018.1 KF005318_p80 hypothetical protein phrog_13761 unknown function unknown function 1 61608 62060
AGM46939.1 KF005318_p1 hypothetical protein phrog_22860 unknown function unknown function -1 1 1117
AGM46953.1 KF005318_p15 hypothetical protein phrog_25886 unknown function unknown function -1 18766 19098
AGM47028.1 KF005318_p90 HflC/HflK family inner membrane lipoprotein phrog_200 lipoprotein other 1 66675 67529
AGM46954.1 KF005318_p16 hypothetical protein phrog_21153 unknown function unknown function 1 19260 19514
AGM46943.1 KF005318_p5 hypothetical protein phrog_2050 virion structural protein head and packaging -1 4488 5243
AGM46993.1 KF005318_p55 hypothetical protein phrog_27645 unknown function unknown function 1 50804 51091
AGM47054.1 KF005318_p116 hypothetical protein phrog_22790 unknown function unknown function -1 100219 100548
AGM46978.1 KF005318_p40 hypothetical protein phrog_23958 unknown function unknown function 1 39358 39717
AGM47041.1 KF005318_p103 hypothetical protein phrog_22761 unknown function unknown function 1 77423 77647
AGM47017.1 KF005318_p79 hypothetical protein phrog_22822 unknown function unknown function 1 61394 61639
AGM46994.1 KF005318_p56 hypothetical protein phrog_1048 unknown function unknown function 1 51084 51356
AGM47044.1 KF005318_p106 UvrD-type helicase phrog_1967 DNA helicase DNA, RNA and nucleotide metabolism 1 79387 80814
AGM46981.1 KF005318_p43 hypothetical protein phrog_25911 unknown function unknown function 1 40800 41051
AGM46950.1 KF005318_p12 hypothetical protein phrog_22442 unknown function unknown function -1 15987 16262
AGM47027.1 KF005318_p89 RP thymidylate synthase phrog_10644 thymidylate synthase DNA, RNA and nucleotide metabolism 1 66141 66557
AGM47011.1 KF005318_p73 hypothetical protein phrog_24319 unknown function unknown function 1 57512 57790
AGM47046.1 KF005318_p108 DNA polymerase phrog_23226 DNA polymerase DNA, RNA and nucleotide metabolism 1 81469 83304
AGM47049.1 KF005318_p111 hypothetical protein phrog_86 ribonucleoside diphosphate reductase small subunit DNA, RNA and nucleotide metabolism 1 85568 86497
AGM47045.1 KF005318_p107 hypothetical protein phrog_25155 unknown function unknown function 1 80817 81488
AGM46967.1 KF005318_p29 hypothetical protein singleton unknown function unknown function -1 34342 34923
AGM47014.1 KF005318_p76 hypothetical protein phrog_23483 unknown function unknown function 1 59317 59532
AGM46995.1 KF005318_p57 hypothetical protein phrog_24749 unknown function unknown function 1 51375 51875
AGM46988.1 KF005318_p50 hypothetical protein phrog_24473 unknown function unknown function 1 45200 45727
AGM46982.1 KF005318_p44 hypothetical protein phrog_27203 unknown function unknown function 1 41075 41818
AGM46974.1 KF005318_p36 hypothetical protein phrog_22654 unknown function unknown function 1 37347 37979
AGM47030.1 KF005318_p92 DNA ligase phrog_114 ATP-dependent DNA ligase DNA, RNA and nucleotide metabolism 1 67846 68976
AGM47020.1 KF005318_p82 hypothetical protein phrog_139 deoxynucleoside monophosphate kinase other 1 62548 63132
AGM46946.1 KF005318_p8 hypothetical protein phrog_2130 unknown function unknown function -1 12322 12843
AGM47021.1 KF005318_p83 hypothetical protein phrog_18067 unknown function unknown function 1 63132 63497
AGM46997.1 KF005318_p59 hypothetical protein singleton unknown function unknown function 1 52663 52926
AGM46991.1 KF005318_p53 hypothetical protein phrog_1735 unknown function unknown function 1 48394 50403
AGM46999.1 KF005318_p61 hypothetical protein phrog_16814 unknown function unknown function 1 53354 53572
AGM47019.1 KF005318_p81 hypothetical protein phrog_3427 holin lysis -1 62038 62487
AGM46984.1 KF005318_p46 hypothetical protein phrog_22493 unknown function unknown function 1 42145 42975
AGM46947.1 KF005318_p9 major coat protein phrog_1357 major head protein head and packaging -1 12980 14125
AGM46976.1 KF005318_p38 hypothetical protein phrog_25708 unknown function unknown function 1 38403 38696
AGM47033.1 KF005318_p95 thioredoxin phrog_22 thioredoxin domain DNA, RNA and nucleotide metabolism 1 70139 70384
AGM47008.1 KF005318_p70 hypothetical protein phrog_22712 unknown function unknown function 1 56659 56973
AGM46960.1 KF005318_p22 hypothetical protein phrog_38 terminase large subunit head and packaging -1 29794 31356
AGM47026.1 KF005318_p88 homing endonuclease phrog_314 homing endonuclease DNA, RNA and nucleotide metabolism 1 65625 66092
AGM46973.1 KF005318_p35 hypothetical protein phrog_25439 unknown function unknown function 1 36988 37317
AGM46975.1 KF005318_p37 hypothetical protein phrog_24443 unknown function unknown function 1 38063 38440
AGM47001.1 KF005318_p63 hypothetical protein phrog_26229 unknown function unknown function 1 54346 54795
AGM46996.1 KF005318_p58 hypothetical protein phrog_1761 unknown function unknown function 1 52269 52451
AGM47013.1 KF005318_p75 hypothetical protein phrog_8828 HNH endonuclease DNA, RNA and nucleotide metabolism 1 58793 59068
AGM46990.1 KF005318_p52 hypothetical protein phrog_1297 ATPase other 1 47058 48365
AGM47023.1 KF005318_p85 hypothetical protein phrog_27004 unknown function unknown function 1 64045 64302
AGM46945.1 KF005318_p7 hypothetical protein phrog_1084 unknown function unknown function -1 11891 12262
AGM46961.1 KF005318_p23 hypothetical protein phrog_2109 unknown function unknown function -1 31349 32074
AGM47043.1 KF005318_p105 hypothetical protein phrog_25666 unknown function unknown function 1 78497 79390
AGM46951.1 KF005318_p13 hypothetical protein phrog_27798 unknown function unknown function -1 16262 16732
AGM47022.1 KF005318_p84 hypothetical protein phrog_3205 unknown function unknown function 1 63484 64035
AGM47016.1 KF005318_p78 hypothetical protein phrog_25350 unknown function unknown function 1 60533 61006
AGM47012.1 KF005318_p74 hypothetical protein phrog_19342 unknown function unknown function 1 57783 58553
AGM46952.1 KF005318_p14 hypothetical protein phrog_1216 portal protein head and packaging -1 16732 18723
AGM47009.1 KF005318_p71 hypothetical protein phrog_22854 unknown function unknown function 1 56976 57164
AGM46942.1 KF005318_p4 hypothetical protein phrog_22937 unknown function unknown function -1 3601 4479
AGM47005.1 KF005318_p67 hypothetical protein phrog_27788 unknown function unknown function 1 55941 56207