| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
KF005318 |
Definition |
Alteromonas phage vB_AmaP_AD45-P3, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae; unclassified Podoviridae. |
DB of origin |
PVOG |
Length |
101724 |
Host Name |
Alteromonas macleodii |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
117 |
%GC |
43.15 |
Number of singletons |
2 |
Number of paralogs |
1 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| AGM46977.1 | KF005318_p39 | hypothetical protein | phrog_23064 | unknown function | unknown function | 1 | 38980 | 39279 |
| AGM46949.1 | KF005318_p11 | hypothetical protein | phrog_26806 | unknown function | unknown function | -1 | 15435 | 15728 |
| AGM46987.1 | KF005318_p49 | hypothetical protein | phrog_289 | GTP-binding domain | other | 1 | 44496 | 44924 |
| AGM47038.1 | KF005318_p100 | hypothetical protein | phrog_2872 | Sak4-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | 1 | 75942 | 76403 |
| AGM47004.1 | KF005318_p66 | hypothetical protein | phrog_23166 | unknown function | unknown function | 1 | 55732 | 55944 |
| AGM46940.1 | KF005318_p2 | hypothetical protein | phrog_26112 | unknown function | unknown function | -1 | 1127 | 1627 |
| AGM47036.1 | KF005318_p98 | hypothetical protein | phrog_31418 | unknown function | unknown function | 1 | 74745 | 75122 |
| AGM46970.1 | KF005318_p32 | hypothetical protein | phrog_27018 | unknown function | unknown function | 1 | 36220 | 36438 |
| AGM47039.1 | KF005318_p101 | hypothetical protein | phrog_26880 | unknown function | unknown function | 1 | 76517 | 76717 |
| AGM46965.1 | KF005318_p27 | hypothetical protein | phrog_26392 | unknown function | unknown function | -1 | 33153 | 33848 |
| AGM47050.1 | KF005318_p112 | hypothetical protein | phrog_474 | phosphofructokinase | other | 1 | 86569 | 86865 |
| AGM47052.1 | KF005318_p114 | hypothetical protein | phrog_26883 | unknown function | unknown function | 1 | 87444 | 88016 |
| AGM47007.1 | KF005318_p69 | hypothetical protein | phrog_27906 | unknown function | unknown function | 1 | 56378 | 56662 |
| AGM46944.1 | KF005318_p6 | tail protein Pb4 | phrog_23593 | tail protein | tail | -1 | 5296 | 11901 |
| AGM46986.1 | KF005318_p48 | hypothetical protein | phrog_22720 | unknown function | unknown function | 1 | 44115 | 44438 |
| AGM47000.1 | KF005318_p62 | hypothetical protein | phrog_2638 | unknown function | unknown function | 1 | 54006 | 54335 |
| AGM46989.1 | KF005318_p51 | hypothetical protein | phrog_1314 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 45739 | 47061 |
| AGM47051.1 | KF005318_p113 | hypothetical protein | phrog_94 | head maturation protease | head and packaging | 1 | 86858 | 87451 |
| AGM46956.1 | KF005318_p18 | hypothetical protein | phrog_26746 | unknown function | unknown function | -1 | 20020 | 20763 |
| AGM47003.1 | KF005318_p65 | hypothetical protein | phrog_24049 | unknown function | unknown function | 1 | 55166 | 55615 |
| AGM46957.1 | KF005318_p19 | hypothetical protein | phrog_27370 | unknown function | unknown function | -1 | 20763 | 25400 |
| AGM47010.1 | KF005318_p72 | hypothetical protein | phrog_35568 | unknown function | unknown function | 1 | 57210 | 57512 |
| AGM47055.1 | KF005318_p117 | hypothetical protein | phrog_24526 | unknown function | unknown function | -1 | 100761 | 101724 |
| AGM46980.1 | KF005318_p42 | hypothetical protein | phrog_22408 | unknown function | unknown function | 1 | 40571 | 40795 |
| AGM46968.1 | KF005318_p30 | hypothetical protein | phrog_23019 | unknown function | unknown function | 1 | 35232 | 35465 |
| AGM46963.1 | KF005318_p25 | hypothetical protein | phrog_25400 | unknown function | unknown function | -1 | 32399 | 32785 |
| AGM46955.1 | KF005318_p17 | hypothetical protein | phrog_24079 | unknown function | unknown function | -1 | 19567 | 19962 |
| AGM46992.1 | KF005318_p54 | hypothetical protein | phrog_2018 | unknown function | unknown function | 1 | 50413 | 50796 |
| AGM47029.1 | KF005318_p91 | hypothetical protein | phrog_25077 | unknown function | unknown function | 1 | 67596 | 67862 |
| AGM47025.1 | KF005318_p87 | hypothetical protein | phrog_19902 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 64895 | 65560 |
| AGM47024.1 | KF005318_p86 | thymidylate synthase | phrog_23580 | thymidylate synthase | DNA, RNA and nucleotide metabolism | 1 | 64292 | 64828 |
| AGM46972.1 | KF005318_p34 | hypothetical protein | phrog_22828 | unknown function | unknown function | 1 | 36722 | 36988 |
| AGM46985.1 | KF005318_p47 | hypothetical protein | phrog_314 | homing endonuclease | DNA, RNA and nucleotide metabolism | 1 | 43349 | 44125 |
| AGM46941.1 | KF005318_p3 | hypothetical protein | phrog_25216 | unknown function | unknown function | -1 | 1691 | 3601 |
| AGM47032.1 | KF005318_p94 | hypothetical protein | phrog_3108 | unknown function | unknown function | 1 | 69636 | 70124 |
| AGM46983.1 | KF005318_p45 | hypothetical protein | phrog_25881 | unknown function | unknown function | 1 | 41833 | 42087 |
| AGM46948.1 | KF005318_p10 | hypothetical protein | phrog_2120 | tail length tape measure protein | tail | -1 | 14179 | 15423 |
| AGM47034.1 | KF005318_p96 | hypothetical protein | phrog_2135 | DNA primase | DNA, RNA and nucleotide metabolism | 1 | 70406 | 72667 |
| AGM47037.1 | KF005318_p99 | hypothetical protein | phrog_69 | exonuclease | DNA, RNA and nucleotide metabolism | 1 | 75101 | 75937 |
| AGM46969.1 | KF005318_p31 | hypothetical protein | phrog_22287 | unknown function | unknown function | 1 | 35648 | 35878 |
| AGM47002.1 | KF005318_p64 | hypothetical protein | phrog_26801 | unknown function | unknown function | 1 | 54841 | 55206 |
| AGM46971.1 | KF005318_p33 | hypothetical protein | phrog_26513 | unknown function | unknown function | 1 | 36429 | 36719 |
| AGM47006.1 | KF005318_p68 | hypothetical protein | phrog_28284 | unknown function | unknown function | 1 | 56182 | 56394 |
| AGM47042.1 | KF005318_p104 | hypothetical protein | phrog_743 | single strand DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 77717 | 78412 |
| AGM47031.1 | KF005318_p93 | hypothetical protein | phrog_7111 | unknown function | unknown function | 1 | 69049 | 69636 |
| AGM47015.1 | KF005318_p77 | hypothetical protein | phrog_23300 | unknown function | unknown function | 1 | 59532 | 59993 |
| AGM46958.1 | KF005318_p20 | tail fiber | phrog_22284 | tail fiber protein | tail | -1 | 25409 | 29119 |
| AGM47035.1 | KF005318_p97 | rIIA protein | phrog_24904 | RIIA lysis inhibitor | lysis | 1 | 72683 | 74770 |
| AGM46962.1 | KF005318_p24 | hypothetical protein | phrog_23425 | unknown function | unknown function | -1 | 32200 | 32409 |
| AGM47040.1 | KF005318_p102 | hypothetical protein | phrog_24910 | unknown function | unknown function | 1 | 76836 | 77345 |
| AGM46998.1 | KF005318_p60 | hypothetical protein | phrog_26871 | unknown function | unknown function | 1 | 53116 | 53361 |
| AGM46959.1 | KF005318_p21 | 30 kDa protein | phrog_2125 | virion structural protein | head and packaging | -1 | 29119 | 29736 |
| AGM46979.1 | KF005318_p41 | hypothetical protein | phrog_22535 | unknown function | unknown function | 1 | 39875 | 40525 |
| AGM47053.1 | KF005318_p115 | hypothetical protein | phrog_26075 | unknown function | unknown function | 1 | 88020 | 88295 |
| AGM47047.1 | KF005318_p109 | hypothetical protein | phrog_1682 | RusA-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 83436 | 83846 |
| AGM46966.1 | KF005318_p28 | hypothetical protein | phrog_26839 | unknown function | unknown function | -1 | 33913 | 34248 |
| AGM47048.1 | KF005318_p110 | ribonucleotide-diphosphate reductase subunit alpha | phrog_84 | ribonucleoside-diphosphate reductase large subunit | DNA, RNA and nucleotide metabolism | 1 | 83840 | 85561 |
| AGM46964.1 | KF005318_p26 | hypothetical protein | phrog_23395 | unknown function | unknown function | -1 | 32971 | 33177 |
| AGM47018.1 | KF005318_p80 | hypothetical protein | phrog_13761 | unknown function | unknown function | 1 | 61608 | 62060 |
| AGM46939.1 | KF005318_p1 | hypothetical protein | phrog_22860 | unknown function | unknown function | -1 | 1 | 1117 |
| AGM46953.1 | KF005318_p15 | hypothetical protein | phrog_25886 | unknown function | unknown function | -1 | 18766 | 19098 |
| AGM47028.1 | KF005318_p90 | HflC/HflK family inner membrane lipoprotein | phrog_200 | lipoprotein | other | 1 | 66675 | 67529 |
| AGM46954.1 | KF005318_p16 | hypothetical protein | phrog_21153 | unknown function | unknown function | 1 | 19260 | 19514 |
| AGM46943.1 | KF005318_p5 | hypothetical protein | phrog_2050 | virion structural protein | head and packaging | -1 | 4488 | 5243 |
| AGM46993.1 | KF005318_p55 | hypothetical protein | phrog_27645 | unknown function | unknown function | 1 | 50804 | 51091 |
| AGM47054.1 | KF005318_p116 | hypothetical protein | phrog_22790 | unknown function | unknown function | -1 | 100219 | 100548 |
| AGM46978.1 | KF005318_p40 | hypothetical protein | phrog_23958 | unknown function | unknown function | 1 | 39358 | 39717 |
| AGM47041.1 | KF005318_p103 | hypothetical protein | phrog_22761 | unknown function | unknown function | 1 | 77423 | 77647 |
| AGM47017.1 | KF005318_p79 | hypothetical protein | phrog_22822 | unknown function | unknown function | 1 | 61394 | 61639 |
| AGM46994.1 | KF005318_p56 | hypothetical protein | phrog_1048 | unknown function | unknown function | 1 | 51084 | 51356 |
| AGM47044.1 | KF005318_p106 | UvrD-type helicase | phrog_1967 | DNA helicase | DNA, RNA and nucleotide metabolism | 1 | 79387 | 80814 |
| AGM46981.1 | KF005318_p43 | hypothetical protein | phrog_25911 | unknown function | unknown function | 1 | 40800 | 41051 |
| AGM46950.1 | KF005318_p12 | hypothetical protein | phrog_22442 | unknown function | unknown function | -1 | 15987 | 16262 |
| AGM47027.1 | KF005318_p89 | RP thymidylate synthase | phrog_10644 | thymidylate synthase | DNA, RNA and nucleotide metabolism | 1 | 66141 | 66557 |
| AGM47011.1 | KF005318_p73 | hypothetical protein | phrog_24319 | unknown function | unknown function | 1 | 57512 | 57790 |
| AGM47046.1 | KF005318_p108 | DNA polymerase | phrog_23226 | DNA polymerase | DNA, RNA and nucleotide metabolism | 1 | 81469 | 83304 |
| AGM47049.1 | KF005318_p111 | hypothetical protein | phrog_86 | ribonucleoside diphosphate reductase small subunit | DNA, RNA and nucleotide metabolism | 1 | 85568 | 86497 |
| AGM47045.1 | KF005318_p107 | hypothetical protein | phrog_25155 | unknown function | unknown function | 1 | 80817 | 81488 |
| AGM46967.1 | KF005318_p29 | hypothetical protein | singleton | unknown function | unknown function | -1 | 34342 | 34923 |
| AGM47014.1 | KF005318_p76 | hypothetical protein | phrog_23483 | unknown function | unknown function | 1 | 59317 | 59532 |
| AGM46995.1 | KF005318_p57 | hypothetical protein | phrog_24749 | unknown function | unknown function | 1 | 51375 | 51875 |
| AGM46988.1 | KF005318_p50 | hypothetical protein | phrog_24473 | unknown function | unknown function | 1 | 45200 | 45727 |
| AGM46982.1 | KF005318_p44 | hypothetical protein | phrog_27203 | unknown function | unknown function | 1 | 41075 | 41818 |
| AGM46974.1 | KF005318_p36 | hypothetical protein | phrog_22654 | unknown function | unknown function | 1 | 37347 | 37979 |
| AGM47030.1 | KF005318_p92 | DNA ligase | phrog_114 | ATP-dependent DNA ligase | DNA, RNA and nucleotide metabolism | 1 | 67846 | 68976 |
| AGM47020.1 | KF005318_p82 | hypothetical protein | phrog_139 | deoxynucleoside monophosphate kinase | other | 1 | 62548 | 63132 |
| AGM46946.1 | KF005318_p8 | hypothetical protein | phrog_2130 | unknown function | unknown function | -1 | 12322 | 12843 |
| AGM47021.1 | KF005318_p83 | hypothetical protein | phrog_18067 | unknown function | unknown function | 1 | 63132 | 63497 |
| AGM46997.1 | KF005318_p59 | hypothetical protein | singleton | unknown function | unknown function | 1 | 52663 | 52926 |
| AGM46991.1 | KF005318_p53 | hypothetical protein | phrog_1735 | unknown function | unknown function | 1 | 48394 | 50403 |
| AGM46999.1 | KF005318_p61 | hypothetical protein | phrog_16814 | unknown function | unknown function | 1 | 53354 | 53572 |
| AGM47019.1 | KF005318_p81 | hypothetical protein | phrog_3427 | holin | lysis | -1 | 62038 | 62487 |
| AGM46984.1 | KF005318_p46 | hypothetical protein | phrog_22493 | unknown function | unknown function | 1 | 42145 | 42975 |
| AGM46947.1 | KF005318_p9 | major coat protein | phrog_1357 | major head protein | head and packaging | -1 | 12980 | 14125 |
| AGM46976.1 | KF005318_p38 | hypothetical protein | phrog_25708 | unknown function | unknown function | 1 | 38403 | 38696 |
| AGM47033.1 | KF005318_p95 | thioredoxin | phrog_22 | thioredoxin domain | DNA, RNA and nucleotide metabolism | 1 | 70139 | 70384 |
| AGM47008.1 | KF005318_p70 | hypothetical protein | phrog_22712 | unknown function | unknown function | 1 | 56659 | 56973 |
| AGM46960.1 | KF005318_p22 | hypothetical protein | phrog_38 | terminase large subunit | head and packaging | -1 | 29794 | 31356 |
| AGM47026.1 | KF005318_p88 | homing endonuclease | phrog_314 | homing endonuclease | DNA, RNA and nucleotide metabolism | 1 | 65625 | 66092 |
| AGM46973.1 | KF005318_p35 | hypothetical protein | phrog_25439 | unknown function | unknown function | 1 | 36988 | 37317 |
| AGM46975.1 | KF005318_p37 | hypothetical protein | phrog_24443 | unknown function | unknown function | 1 | 38063 | 38440 |
| AGM47001.1 | KF005318_p63 | hypothetical protein | phrog_26229 | unknown function | unknown function | 1 | 54346 | 54795 |
| AGM46996.1 | KF005318_p58 | hypothetical protein | phrog_1761 | unknown function | unknown function | 1 | 52269 | 52451 |
| AGM47013.1 | KF005318_p75 | hypothetical protein | phrog_8828 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 58793 | 59068 |
| AGM46990.1 | KF005318_p52 | hypothetical protein | phrog_1297 | ATPase | other | 1 | 47058 | 48365 |
| AGM47023.1 | KF005318_p85 | hypothetical protein | phrog_27004 | unknown function | unknown function | 1 | 64045 | 64302 |
| AGM46945.1 | KF005318_p7 | hypothetical protein | phrog_1084 | unknown function | unknown function | -1 | 11891 | 12262 |
| AGM46961.1 | KF005318_p23 | hypothetical protein | phrog_2109 | unknown function | unknown function | -1 | 31349 | 32074 |
| AGM47043.1 | KF005318_p105 | hypothetical protein | phrog_25666 | unknown function | unknown function | 1 | 78497 | 79390 |
| AGM46951.1 | KF005318_p13 | hypothetical protein | phrog_27798 | unknown function | unknown function | -1 | 16262 | 16732 |
| AGM47022.1 | KF005318_p84 | hypothetical protein | phrog_3205 | unknown function | unknown function | 1 | 63484 | 64035 |
| AGM47016.1 | KF005318_p78 | hypothetical protein | phrog_25350 | unknown function | unknown function | 1 | 60533 | 61006 |
| AGM47012.1 | KF005318_p74 | hypothetical protein | phrog_19342 | unknown function | unknown function | 1 | 57783 | 58553 |
| AGM46952.1 | KF005318_p14 | hypothetical protein | phrog_1216 | portal protein | head and packaging | -1 | 16732 | 18723 |
| AGM47009.1 | KF005318_p71 | hypothetical protein | phrog_22854 | unknown function | unknown function | 1 | 56976 | 57164 |
| AGM46942.1 | KF005318_p4 | hypothetical protein | phrog_22937 | unknown function | unknown function | -1 | 3601 | 4479 |
| AGM47005.1 | KF005318_p67 | hypothetical protein | phrog_27788 | unknown function | unknown function | 1 | 55941 | 56207 |