Genomic map of Alteromonas phage vB_AmaP_AD45-P4 (KF005319)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
KF005319
Definition
Alteromonas phage vB_AmaP_AD45-P4, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae; unclassified Podoviridae.
DB of origin
PVOG
Length
100619
Host Name
Alteromonas macleodii
Host domain
Bacteria
Is prophage?
undef
Number of proteins
116
%GC
43.19
Number of singletons
1
Number of paralogs
1

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
AGM47076.1 KF005319_p21 30 kDa protein phrog_2125 virion structural protein head and packaging -1 29091 29708
AGM47102.1 KF005319_p47 hypothetical protein phrog_314 homing endonuclease DNA, RNA and nucleotide metabolism 1 42723 43322
AGM47062.1 KF005319_p7 hypothetical protein phrog_1084 unknown function unknown function -1 11863 12234
AGM47089.1 KF005319_p34 hypothetical protein phrog_22828 unknown function unknown function 1 36096 36362
AGM47135.1 KF005319_p80 hypothetical protein phrog_3427 holin lysis -1 60933 61382
AGM47094.1 KF005319_p39 hypothetical protein phrog_23064 unknown function unknown function 1 38354 38653
AGM47142.1 KF005319_p87 homing endonuclease phrog_314 homing endonuclease DNA, RNA and nucleotide metabolism 1 64520 64987
AGM47168.1 KF005319_p113 hypothetical protein phrog_26883 unknown function unknown function 1 86339 86911
AGM47126.1 KF005319_p71 hypothetical protein phrog_35568 unknown function unknown function 1 56105 56407
AGM47160.1 KF005319_p105 UvrD-type helicase phrog_1967 DNA helicase DNA, RNA and nucleotide metabolism 1 78282 79709
AGM47169.1 KF005319_p114 hypothetical protein phrog_26075 unknown function unknown function 1 86915 87190
AGM47149.1 KF005319_p94 thioredoxin phrog_22 thioredoxin domain DNA, RNA and nucleotide metabolism 1 69034 69279
AGM47077.1 KF005319_p22 hypothetical protein phrog_38 terminase large subunit head and packaging -1 29766 31328
AGM47080.1 KF005319_p25 hypothetical protein phrog_25400 unknown function unknown function -1 32371 32757
AGM47107.1 KF005319_p52 hypothetical protein phrog_1297 ATPase other 1 46232 47539
AGM47170.1 KF005319_p115 hypothetical protein phrog_22790 unknown function unknown function -1 99114 99443
AGM47088.1 KF005319_p33 hypothetical protein phrog_26513 unknown function unknown function 1 35803 36093
AGM47127.1 KF005319_p72 hypothetical protein phrog_24319 unknown function unknown function 1 56407 56685
AGM47152.1 KF005319_p97 hypothetical protein phrog_31418 unknown function unknown function 1 73640 74017
AGM47100.1 KF005319_p45 hypothetical protein phrog_25881 unknown function unknown function 1 41207 41461
AGM47118.1 KF005319_p63 hypothetical protein phrog_26801 unknown function unknown function 1 53736 54101
AGM47165.1 KF005319_p110 hypothetical protein phrog_86 ribonucleoside diphosphate reductase small subunit DNA, RNA and nucleotide metabolism 1 84463 85392
AGM47136.1 KF005319_p81 hypothetical protein phrog_139 deoxynucleoside monophosphate kinase other 1 61443 62027
AGM47095.1 KF005319_p40 hypothetical protein phrog_23958 unknown function unknown function 1 38732 39091
AGM47108.1 KF005319_p53 hypothetical protein phrog_1735 unknown function unknown function 1 47568 49577
AGM47145.1 KF005319_p90 hypothetical protein phrog_25077 unknown function unknown function 1 66491 66757
AGM47072.1 KF005319_p17 hypothetical protein phrog_24079 unknown function unknown function -1 19539 19934
AGM47151.1 KF005319_p96 rIIA protein phrog_24904 RIIA lysis inhibitor lysis 1 71578 73665
AGM47113.1 KF005319_p58 hypothetical protein phrog_1761 unknown function unknown function 1 51443 51625
AGM47099.1 KF005319_p44 hypothetical protein phrog_27203 unknown function unknown function 1 40449 41192
AGM47064.1 KF005319_p9 major coat protein phrog_1357 major head protein head and packaging -1 12952 14097
AGM47066.1 KF005319_p11 hypothetical protein phrog_26806 unknown function unknown function -1 15407 15700
AGM47059.1 KF005319_p4 hypothetical protein phrog_22937 unknown function unknown function -1 3573 4451
AGM47131.1 KF005319_p76 hypothetical protein phrog_23300 unknown function unknown function 1 58427 58888
AGM47079.1 KF005319_p24 hypothetical protein phrog_23425 unknown function unknown function -1 32172 32381
AGM47154.1 KF005319_p99 hypothetical protein phrog_2872 Sak4-like ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 74837 75298
AGM47065.1 KF005319_p10 hypothetical protein phrog_2120 tail length tape measure protein tail -1 14151 15395
AGM47150.1 KF005319_p95 hypothetical protein phrog_2135 DNA primase DNA, RNA and nucleotide metabolism 1 69301 71562
AGM47091.1 KF005319_p36 hypothetical protein phrog_22654 unknown function unknown function 1 36721 37353
AGM47068.1 KF005319_p13 hypothetical protein phrog_27798 unknown function unknown function -1 16234 16704
AGM47093.1 KF005319_p38 hypothetical protein phrog_25708 unknown function unknown function 1 37777 38070
AGM47122.1 KF005319_p67 hypothetical protein phrog_28284 unknown function unknown function 1 55077 55289
AGM47139.1 KF005319_p84 hypothetical protein phrog_27004 unknown function unknown function 1 62940 63197
AGM47143.1 KF005319_p88 RP thymidylate synthase phrog_10644 thymidylate synthase DNA, RNA and nucleotide metabolism 1 65036 65452
AGM47163.1 KF005319_p108 hypothetical protein phrog_1682 RusA-like Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 82331 82741
AGM47096.1 KF005319_p41 hypothetical protein phrog_22535 unknown function unknown function 1 39249 39899
AGM47083.1 KF005319_p28 hypothetical protein phrog_26839 unknown function unknown function -1 33885 34220
AGM47153.1 KF005319_p98 hypothetical protein phrog_69 exonuclease DNA, RNA and nucleotide metabolism 1 74026 74832
AGM47078.1 KF005319_p23 hypothetical protein phrog_2109 unknown function unknown function -1 31321 32046
AGM47161.1 KF005319_p106 hypothetical protein phrog_25155 unknown function unknown function 1 79712 80383
AGM47121.1 KF005319_p66 hypothetical protein phrog_27788 unknown function unknown function 1 54836 55102
AGM47110.1 KF005319_p55 hypothetical protein phrog_27645 unknown function unknown function 1 49978 50265
AGM47090.1 KF005319_p35 hypothetical protein phrog_25439 unknown function unknown function 1 36362 36691
AGM47070.1 KF005319_p15 hypothetical protein phrog_25886 unknown function unknown function -1 18738 19070
AGM47137.1 KF005319_p82 hypothetical protein phrog_18067 unknown function unknown function 1 62027 62392
AGM47159.1 KF005319_p104 hypothetical protein phrog_25666 unknown function unknown function 1 77392 78285
AGM47125.1 KF005319_p70 hypothetical protein phrog_22854 unknown function unknown function 1 55871 56059
AGM47057.1 KF005319_p2 hypothetical protein phrog_26112 unknown function unknown function -1 1127 1600
AGM47075.1 KF005319_p20 tail fiber phrog_22284 tail fiber protein tail -1 25381 29091
AGM47071.1 KF005319_p16 hypothetical protein phrog_21153 unknown function unknown function 1 19232 19486
AGM47157.1 KF005319_p102 hypothetical protein phrog_22761 unknown function unknown function 1 76318 76542
AGM47103.1 KF005319_p48 hypothetical protein phrog_22720 unknown function unknown function 1 43319 43612
AGM47092.1 KF005319_p37 hypothetical protein phrog_24443 unknown function unknown function 1 37437 37814
AGM47156.1 KF005319_p101 hypothetical protein phrog_24910 unknown function unknown function 1 75731 76240
AGM47101.1 KF005319_p46 hypothetical protein phrog_22493 unknown function unknown function 1 41519 42349
AGM47167.1 KF005319_p112 hypothetical protein phrog_94 head maturation protease head and packaging 1 85753 86346
AGM47133.1 KF005319_p78 hypothetical protein phrog_22822 unknown function unknown function 1 60289 60534
AGM47144.1 KF005319_p89 HflC/HflK family inner membrane lipoprotein phrog_200 lipoprotein other 1 65570 66424
AGM47119.1 KF005319_p64 hypothetical protein phrog_24049 unknown function unknown function 1 54061 54510
AGM47106.1 KF005319_p51 hypothetical protein phrog_1314 HNH endonuclease DNA, RNA and nucleotide metabolism 1 44913 46235
AGM47166.1 KF005319_p111 hypothetical protein phrog_474 phosphofructokinase other 1 85464 85760
AGM47140.1 KF005319_p85 thymidylate synthase phrog_23580 thymidylate synthase DNA, RNA and nucleotide metabolism 1 63187 63723
AGM47081.1 KF005319_p26 hypothetical protein phrog_23395 unknown function unknown function -1 32943 33149
AGM47109.1 KF005319_p54 hypothetical protein phrog_2018 unknown function unknown function 1 49587 49970
AGM47082.1 KF005319_p27 hypothetical protein phrog_26392 unknown function unknown function -1 33125 33820
AGM47067.1 KF005319_p12 hypothetical protein phrog_22442 unknown function unknown function -1 15959 16234
AGM47115.1 KF005319_p60 hypothetical protein phrog_16814 unknown function unknown function 1 52249 52467
AGM47114.1 KF005319_p59 hypothetical protein phrog_26871 unknown function unknown function 1 52011 52256
AGM47073.1 KF005319_p18 hypothetical protein phrog_26746 unknown function unknown function -1 19992 20735
AGM47123.1 KF005319_p68 hypothetical protein phrog_27906 unknown function unknown function 1 55273 55557
AGM47105.1 KF005319_p50 hypothetical protein phrog_24473 unknown function unknown function 1 44374 44901
AGM47087.1 KF005319_p32 hypothetical protein phrog_27018 unknown function unknown function 1 35594 35812
AGM47097.1 KF005319_p42 hypothetical protein phrog_22408 unknown function unknown function 1 39945 40169
AGM47069.1 KF005319_p14 hypothetical protein phrog_1216 portal protein head and packaging -1 16704 18695
AGM47148.1 KF005319_p93 hypothetical protein phrog_3108 unknown function unknown function 1 68531 69019
AGM47063.1 KF005319_p8 hypothetical protein phrog_2130 unknown function unknown function -1 12294 12815
AGM47129.1 KF005319_p74 hypothetical protein phrog_8828 HNH endonuclease DNA, RNA and nucleotide metabolism 1 57688 57963
AGM47086.1 KF005319_p31 hypothetical protein phrog_22287 unknown function unknown function 1 35022 35252
AGM47074.1 KF005319_p19 hypothetical protein phrog_27370 unknown function unknown function -1 20735 25372
AGM47158.1 KF005319_p103 hypothetical protein phrog_743 single strand DNA binding protein DNA, RNA and nucleotide metabolism 1 76612 77307
AGM47085.1 KF005319_p30 hypothetical protein phrog_23019 unknown function unknown function 1 34606 34839
AGM47147.1 KF005319_p92 hypothetical protein phrog_7111 unknown function unknown function 1 67944 68531
AGM47084.1 KF005319_p29 hypothetical protein singleton unknown function unknown function -1 34384 34581
AGM47130.1 KF005319_p75 hypothetical protein phrog_23483 unknown function unknown function 1 58212 58427
AGM47111.1 KF005319_p56 hypothetical protein phrog_1048 unknown function unknown function 1 50258 50530
AGM47060.1 KF005319_p5 hypothetical protein phrog_2050 virion structural protein head and packaging -1 4460 5215
AGM47128.1 KF005319_p73 hypothetical protein phrog_19342 unknown function unknown function 1 56678 57448
AGM47155.1 KF005319_p100 hypothetical protein phrog_26880 unknown function unknown function 1 75412 75612
AGM47134.1 KF005319_p79 hypothetical protein phrog_13761 unknown function unknown function 1 60503 60955
AGM47162.1 KF005319_p107 DNA polymerase phrog_23226 DNA polymerase DNA, RNA and nucleotide metabolism 1 80364 82199
AGM47146.1 KF005319_p91 DNA ligase phrog_114 ATP-dependent DNA ligase DNA, RNA and nucleotide metabolism 1 66741 67871
AGM47058.1 KF005319_p3 hypothetical protein phrog_25216 unknown function unknown function -1 1747 3573
AGM47120.1 KF005319_p65 hypothetical protein phrog_23166 unknown function unknown function 1 54627 54839
AGM47104.1 KF005319_p49 hypothetical protein phrog_289 GTP-binding domain other 1 43670 44098
AGM47141.1 KF005319_p86 hypothetical protein phrog_19902 HNH endonuclease DNA, RNA and nucleotide metabolism 1 63790 64455
AGM47061.1 KF005319_p6 tail protein Pb4 phrog_23593 tail protein tail -1 5268 11873
AGM47124.1 KF005319_p69 hypothetical protein phrog_22712 unknown function unknown function 1 55554 55868
AGM47138.1 KF005319_p83 hypothetical protein phrog_3205 unknown function unknown function 1 62379 62930
AGM47112.1 KF005319_p57 hypothetical protein phrog_24749 unknown function unknown function 1 50549 51049
AGM47171.1 KF005319_p116 hypothetical protein phrog_24526 unknown function unknown function -1 99656 100619
AGM47164.1 KF005319_p109 ribonucleotide-diphosphate reductase subunit alpha phrog_84 ribonucleoside-diphosphate reductase large subunit DNA, RNA and nucleotide metabolism 1 82735 84456
AGM47132.1 KF005319_p77 hypothetical protein phrog_25350 unknown function unknown function 1 59428 59901
AGM47098.1 KF005319_p43 hypothetical protein phrog_25911 unknown function unknown function 1 40174 40425
AGM47056.1 KF005319_p1 hypothetical protein phrog_22860 unknown function unknown function -1 1 1117
AGM47117.1 KF005319_p62 hypothetical protein phrog_26229 unknown function unknown function 1 53241 53690
AGM47116.1 KF005319_p61 hypothetical protein phrog_2638 unknown function unknown function 1 52901 53230