| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
KF005319 |
Definition |
Alteromonas phage vB_AmaP_AD45-P4, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae; unclassified Podoviridae. |
DB of origin |
PVOG |
Length |
100619 |
Host Name |
Alteromonas macleodii |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
116 |
%GC |
43.19 |
Number of singletons |
1 |
Number of paralogs |
1 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| AGM47076.1 | KF005319_p21 | 30 kDa protein | phrog_2125 | virion structural protein | head and packaging | -1 | 29091 | 29708 |
| AGM47102.1 | KF005319_p47 | hypothetical protein | phrog_314 | homing endonuclease | DNA, RNA and nucleotide metabolism | 1 | 42723 | 43322 |
| AGM47062.1 | KF005319_p7 | hypothetical protein | phrog_1084 | unknown function | unknown function | -1 | 11863 | 12234 |
| AGM47089.1 | KF005319_p34 | hypothetical protein | phrog_22828 | unknown function | unknown function | 1 | 36096 | 36362 |
| AGM47135.1 | KF005319_p80 | hypothetical protein | phrog_3427 | holin | lysis | -1 | 60933 | 61382 |
| AGM47094.1 | KF005319_p39 | hypothetical protein | phrog_23064 | unknown function | unknown function | 1 | 38354 | 38653 |
| AGM47142.1 | KF005319_p87 | homing endonuclease | phrog_314 | homing endonuclease | DNA, RNA and nucleotide metabolism | 1 | 64520 | 64987 |
| AGM47168.1 | KF005319_p113 | hypothetical protein | phrog_26883 | unknown function | unknown function | 1 | 86339 | 86911 |
| AGM47126.1 | KF005319_p71 | hypothetical protein | phrog_35568 | unknown function | unknown function | 1 | 56105 | 56407 |
| AGM47160.1 | KF005319_p105 | UvrD-type helicase | phrog_1967 | DNA helicase | DNA, RNA and nucleotide metabolism | 1 | 78282 | 79709 |
| AGM47169.1 | KF005319_p114 | hypothetical protein | phrog_26075 | unknown function | unknown function | 1 | 86915 | 87190 |
| AGM47149.1 | KF005319_p94 | thioredoxin | phrog_22 | thioredoxin domain | DNA, RNA and nucleotide metabolism | 1 | 69034 | 69279 |
| AGM47077.1 | KF005319_p22 | hypothetical protein | phrog_38 | terminase large subunit | head and packaging | -1 | 29766 | 31328 |
| AGM47080.1 | KF005319_p25 | hypothetical protein | phrog_25400 | unknown function | unknown function | -1 | 32371 | 32757 |
| AGM47107.1 | KF005319_p52 | hypothetical protein | phrog_1297 | ATPase | other | 1 | 46232 | 47539 |
| AGM47170.1 | KF005319_p115 | hypothetical protein | phrog_22790 | unknown function | unknown function | -1 | 99114 | 99443 |
| AGM47088.1 | KF005319_p33 | hypothetical protein | phrog_26513 | unknown function | unknown function | 1 | 35803 | 36093 |
| AGM47127.1 | KF005319_p72 | hypothetical protein | phrog_24319 | unknown function | unknown function | 1 | 56407 | 56685 |
| AGM47152.1 | KF005319_p97 | hypothetical protein | phrog_31418 | unknown function | unknown function | 1 | 73640 | 74017 |
| AGM47100.1 | KF005319_p45 | hypothetical protein | phrog_25881 | unknown function | unknown function | 1 | 41207 | 41461 |
| AGM47118.1 | KF005319_p63 | hypothetical protein | phrog_26801 | unknown function | unknown function | 1 | 53736 | 54101 |
| AGM47165.1 | KF005319_p110 | hypothetical protein | phrog_86 | ribonucleoside diphosphate reductase small subunit | DNA, RNA and nucleotide metabolism | 1 | 84463 | 85392 |
| AGM47136.1 | KF005319_p81 | hypothetical protein | phrog_139 | deoxynucleoside monophosphate kinase | other | 1 | 61443 | 62027 |
| AGM47095.1 | KF005319_p40 | hypothetical protein | phrog_23958 | unknown function | unknown function | 1 | 38732 | 39091 |
| AGM47108.1 | KF005319_p53 | hypothetical protein | phrog_1735 | unknown function | unknown function | 1 | 47568 | 49577 |
| AGM47145.1 | KF005319_p90 | hypothetical protein | phrog_25077 | unknown function | unknown function | 1 | 66491 | 66757 |
| AGM47072.1 | KF005319_p17 | hypothetical protein | phrog_24079 | unknown function | unknown function | -1 | 19539 | 19934 |
| AGM47151.1 | KF005319_p96 | rIIA protein | phrog_24904 | RIIA lysis inhibitor | lysis | 1 | 71578 | 73665 |
| AGM47113.1 | KF005319_p58 | hypothetical protein | phrog_1761 | unknown function | unknown function | 1 | 51443 | 51625 |
| AGM47099.1 | KF005319_p44 | hypothetical protein | phrog_27203 | unknown function | unknown function | 1 | 40449 | 41192 |
| AGM47064.1 | KF005319_p9 | major coat protein | phrog_1357 | major head protein | head and packaging | -1 | 12952 | 14097 |
| AGM47066.1 | KF005319_p11 | hypothetical protein | phrog_26806 | unknown function | unknown function | -1 | 15407 | 15700 |
| AGM47059.1 | KF005319_p4 | hypothetical protein | phrog_22937 | unknown function | unknown function | -1 | 3573 | 4451 |
| AGM47131.1 | KF005319_p76 | hypothetical protein | phrog_23300 | unknown function | unknown function | 1 | 58427 | 58888 |
| AGM47079.1 | KF005319_p24 | hypothetical protein | phrog_23425 | unknown function | unknown function | -1 | 32172 | 32381 |
| AGM47154.1 | KF005319_p99 | hypothetical protein | phrog_2872 | Sak4-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | 1 | 74837 | 75298 |
| AGM47065.1 | KF005319_p10 | hypothetical protein | phrog_2120 | tail length tape measure protein | tail | -1 | 14151 | 15395 |
| AGM47150.1 | KF005319_p95 | hypothetical protein | phrog_2135 | DNA primase | DNA, RNA and nucleotide metabolism | 1 | 69301 | 71562 |
| AGM47091.1 | KF005319_p36 | hypothetical protein | phrog_22654 | unknown function | unknown function | 1 | 36721 | 37353 |
| AGM47068.1 | KF005319_p13 | hypothetical protein | phrog_27798 | unknown function | unknown function | -1 | 16234 | 16704 |
| AGM47093.1 | KF005319_p38 | hypothetical protein | phrog_25708 | unknown function | unknown function | 1 | 37777 | 38070 |
| AGM47122.1 | KF005319_p67 | hypothetical protein | phrog_28284 | unknown function | unknown function | 1 | 55077 | 55289 |
| AGM47139.1 | KF005319_p84 | hypothetical protein | phrog_27004 | unknown function | unknown function | 1 | 62940 | 63197 |
| AGM47143.1 | KF005319_p88 | RP thymidylate synthase | phrog_10644 | thymidylate synthase | DNA, RNA and nucleotide metabolism | 1 | 65036 | 65452 |
| AGM47163.1 | KF005319_p108 | hypothetical protein | phrog_1682 | RusA-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 82331 | 82741 |
| AGM47096.1 | KF005319_p41 | hypothetical protein | phrog_22535 | unknown function | unknown function | 1 | 39249 | 39899 |
| AGM47083.1 | KF005319_p28 | hypothetical protein | phrog_26839 | unknown function | unknown function | -1 | 33885 | 34220 |
| AGM47153.1 | KF005319_p98 | hypothetical protein | phrog_69 | exonuclease | DNA, RNA and nucleotide metabolism | 1 | 74026 | 74832 |
| AGM47078.1 | KF005319_p23 | hypothetical protein | phrog_2109 | unknown function | unknown function | -1 | 31321 | 32046 |
| AGM47161.1 | KF005319_p106 | hypothetical protein | phrog_25155 | unknown function | unknown function | 1 | 79712 | 80383 |
| AGM47121.1 | KF005319_p66 | hypothetical protein | phrog_27788 | unknown function | unknown function | 1 | 54836 | 55102 |
| AGM47110.1 | KF005319_p55 | hypothetical protein | phrog_27645 | unknown function | unknown function | 1 | 49978 | 50265 |
| AGM47090.1 | KF005319_p35 | hypothetical protein | phrog_25439 | unknown function | unknown function | 1 | 36362 | 36691 |
| AGM47070.1 | KF005319_p15 | hypothetical protein | phrog_25886 | unknown function | unknown function | -1 | 18738 | 19070 |
| AGM47137.1 | KF005319_p82 | hypothetical protein | phrog_18067 | unknown function | unknown function | 1 | 62027 | 62392 |
| AGM47159.1 | KF005319_p104 | hypothetical protein | phrog_25666 | unknown function | unknown function | 1 | 77392 | 78285 |
| AGM47125.1 | KF005319_p70 | hypothetical protein | phrog_22854 | unknown function | unknown function | 1 | 55871 | 56059 |
| AGM47057.1 | KF005319_p2 | hypothetical protein | phrog_26112 | unknown function | unknown function | -1 | 1127 | 1600 |
| AGM47075.1 | KF005319_p20 | tail fiber | phrog_22284 | tail fiber protein | tail | -1 | 25381 | 29091 |
| AGM47071.1 | KF005319_p16 | hypothetical protein | phrog_21153 | unknown function | unknown function | 1 | 19232 | 19486 |
| AGM47157.1 | KF005319_p102 | hypothetical protein | phrog_22761 | unknown function | unknown function | 1 | 76318 | 76542 |
| AGM47103.1 | KF005319_p48 | hypothetical protein | phrog_22720 | unknown function | unknown function | 1 | 43319 | 43612 |
| AGM47092.1 | KF005319_p37 | hypothetical protein | phrog_24443 | unknown function | unknown function | 1 | 37437 | 37814 |
| AGM47156.1 | KF005319_p101 | hypothetical protein | phrog_24910 | unknown function | unknown function | 1 | 75731 | 76240 |
| AGM47101.1 | KF005319_p46 | hypothetical protein | phrog_22493 | unknown function | unknown function | 1 | 41519 | 42349 |
| AGM47167.1 | KF005319_p112 | hypothetical protein | phrog_94 | head maturation protease | head and packaging | 1 | 85753 | 86346 |
| AGM47133.1 | KF005319_p78 | hypothetical protein | phrog_22822 | unknown function | unknown function | 1 | 60289 | 60534 |
| AGM47144.1 | KF005319_p89 | HflC/HflK family inner membrane lipoprotein | phrog_200 | lipoprotein | other | 1 | 65570 | 66424 |
| AGM47119.1 | KF005319_p64 | hypothetical protein | phrog_24049 | unknown function | unknown function | 1 | 54061 | 54510 |
| AGM47106.1 | KF005319_p51 | hypothetical protein | phrog_1314 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 44913 | 46235 |
| AGM47166.1 | KF005319_p111 | hypothetical protein | phrog_474 | phosphofructokinase | other | 1 | 85464 | 85760 |
| AGM47140.1 | KF005319_p85 | thymidylate synthase | phrog_23580 | thymidylate synthase | DNA, RNA and nucleotide metabolism | 1 | 63187 | 63723 |
| AGM47081.1 | KF005319_p26 | hypothetical protein | phrog_23395 | unknown function | unknown function | -1 | 32943 | 33149 |
| AGM47109.1 | KF005319_p54 | hypothetical protein | phrog_2018 | unknown function | unknown function | 1 | 49587 | 49970 |
| AGM47082.1 | KF005319_p27 | hypothetical protein | phrog_26392 | unknown function | unknown function | -1 | 33125 | 33820 |
| AGM47067.1 | KF005319_p12 | hypothetical protein | phrog_22442 | unknown function | unknown function | -1 | 15959 | 16234 |
| AGM47115.1 | KF005319_p60 | hypothetical protein | phrog_16814 | unknown function | unknown function | 1 | 52249 | 52467 |
| AGM47114.1 | KF005319_p59 | hypothetical protein | phrog_26871 | unknown function | unknown function | 1 | 52011 | 52256 |
| AGM47073.1 | KF005319_p18 | hypothetical protein | phrog_26746 | unknown function | unknown function | -1 | 19992 | 20735 |
| AGM47123.1 | KF005319_p68 | hypothetical protein | phrog_27906 | unknown function | unknown function | 1 | 55273 | 55557 |
| AGM47105.1 | KF005319_p50 | hypothetical protein | phrog_24473 | unknown function | unknown function | 1 | 44374 | 44901 |
| AGM47087.1 | KF005319_p32 | hypothetical protein | phrog_27018 | unknown function | unknown function | 1 | 35594 | 35812 |
| AGM47097.1 | KF005319_p42 | hypothetical protein | phrog_22408 | unknown function | unknown function | 1 | 39945 | 40169 |
| AGM47069.1 | KF005319_p14 | hypothetical protein | phrog_1216 | portal protein | head and packaging | -1 | 16704 | 18695 |
| AGM47148.1 | KF005319_p93 | hypothetical protein | phrog_3108 | unknown function | unknown function | 1 | 68531 | 69019 |
| AGM47063.1 | KF005319_p8 | hypothetical protein | phrog_2130 | unknown function | unknown function | -1 | 12294 | 12815 |
| AGM47129.1 | KF005319_p74 | hypothetical protein | phrog_8828 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 57688 | 57963 |
| AGM47086.1 | KF005319_p31 | hypothetical protein | phrog_22287 | unknown function | unknown function | 1 | 35022 | 35252 |
| AGM47074.1 | KF005319_p19 | hypothetical protein | phrog_27370 | unknown function | unknown function | -1 | 20735 | 25372 |
| AGM47158.1 | KF005319_p103 | hypothetical protein | phrog_743 | single strand DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 76612 | 77307 |
| AGM47085.1 | KF005319_p30 | hypothetical protein | phrog_23019 | unknown function | unknown function | 1 | 34606 | 34839 |
| AGM47147.1 | KF005319_p92 | hypothetical protein | phrog_7111 | unknown function | unknown function | 1 | 67944 | 68531 |
| AGM47084.1 | KF005319_p29 | hypothetical protein | singleton | unknown function | unknown function | -1 | 34384 | 34581 |
| AGM47130.1 | KF005319_p75 | hypothetical protein | phrog_23483 | unknown function | unknown function | 1 | 58212 | 58427 |
| AGM47111.1 | KF005319_p56 | hypothetical protein | phrog_1048 | unknown function | unknown function | 1 | 50258 | 50530 |
| AGM47060.1 | KF005319_p5 | hypothetical protein | phrog_2050 | virion structural protein | head and packaging | -1 | 4460 | 5215 |
| AGM47128.1 | KF005319_p73 | hypothetical protein | phrog_19342 | unknown function | unknown function | 1 | 56678 | 57448 |
| AGM47155.1 | KF005319_p100 | hypothetical protein | phrog_26880 | unknown function | unknown function | 1 | 75412 | 75612 |
| AGM47134.1 | KF005319_p79 | hypothetical protein | phrog_13761 | unknown function | unknown function | 1 | 60503 | 60955 |
| AGM47162.1 | KF005319_p107 | DNA polymerase | phrog_23226 | DNA polymerase | DNA, RNA and nucleotide metabolism | 1 | 80364 | 82199 |
| AGM47146.1 | KF005319_p91 | DNA ligase | phrog_114 | ATP-dependent DNA ligase | DNA, RNA and nucleotide metabolism | 1 | 66741 | 67871 |
| AGM47058.1 | KF005319_p3 | hypothetical protein | phrog_25216 | unknown function | unknown function | -1 | 1747 | 3573 |
| AGM47120.1 | KF005319_p65 | hypothetical protein | phrog_23166 | unknown function | unknown function | 1 | 54627 | 54839 |
| AGM47104.1 | KF005319_p49 | hypothetical protein | phrog_289 | GTP-binding domain | other | 1 | 43670 | 44098 |
| AGM47141.1 | KF005319_p86 | hypothetical protein | phrog_19902 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 63790 | 64455 |
| AGM47061.1 | KF005319_p6 | tail protein Pb4 | phrog_23593 | tail protein | tail | -1 | 5268 | 11873 |
| AGM47124.1 | KF005319_p69 | hypothetical protein | phrog_22712 | unknown function | unknown function | 1 | 55554 | 55868 |
| AGM47138.1 | KF005319_p83 | hypothetical protein | phrog_3205 | unknown function | unknown function | 1 | 62379 | 62930 |
| AGM47112.1 | KF005319_p57 | hypothetical protein | phrog_24749 | unknown function | unknown function | 1 | 50549 | 51049 |
| AGM47171.1 | KF005319_p116 | hypothetical protein | phrog_24526 | unknown function | unknown function | -1 | 99656 | 100619 |
| AGM47164.1 | KF005319_p109 | ribonucleotide-diphosphate reductase subunit alpha | phrog_84 | ribonucleoside-diphosphate reductase large subunit | DNA, RNA and nucleotide metabolism | 1 | 82735 | 84456 |
| AGM47132.1 | KF005319_p77 | hypothetical protein | phrog_25350 | unknown function | unknown function | 1 | 59428 | 59901 |
| AGM47098.1 | KF005319_p43 | hypothetical protein | phrog_25911 | unknown function | unknown function | 1 | 40174 | 40425 |
| AGM47056.1 | KF005319_p1 | hypothetical protein | phrog_22860 | unknown function | unknown function | -1 | 1 | 1117 |
| AGM47117.1 | KF005319_p62 | hypothetical protein | phrog_26229 | unknown function | unknown function | 1 | 53241 | 53690 |
| AGM47116.1 | KF005319_p61 | hypothetical protein | phrog_2638 | unknown function | unknown function | 1 | 52901 | 53230 |