Genomic map of Mycobacterium phage ABCat (KF188414)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
KF188414
Definition
Mycobacterium phage ABCat, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Kostyavirus; unclassified Kostyavirus.
DB of origin
PVOG
Length
76131
Host Name
Mycobacterium smegmatis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
143
%GC
63.04
Number of singletons
0
Number of paralogs
4

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
AGR48864.1 KF188414_p24 minor tail protein phrog_732 minor tail protein tail 1 21445 22266
AGR48963.1 KF188414_p123 hypothetical protein phrog_2925 unknown function unknown function 1 69374 69553
AGR48899.1 KF188414_p59 hypothetical protein phrog_2744 unknown function unknown function 1 43160 43465
AGR48888.1 KF188414_p48 hypothetical protein phrog_2759 unknown function unknown function -1 37122 37517
AGR48927.1 KF188414_p87 hypothetical protein phrog_2844 unknown function unknown function 1 54829 54951
AGR48968.1 KF188414_p128 hypothetical protein phrog_2942 unknown function unknown function -1 70976 71230
AGR48856.1 KF188414_p16 hypothetical protein phrog_2805 minor tail protein tail 1 10589 10969
AGR48960.1 KF188414_p120 hypothetical protein phrog_2764 unknown function unknown function 1 68892 69059
AGR48965.1 KF188414_p125 hypothetical protein phrog_3016 unknown function unknown function 1 69668 69829
AGR48866.1 KF188414_p26 D-ala-D-ala carboxypeptidase phrog_382 minor tail protein with lysin activity tail 1 24676 27516
AGR48970.1 KF188414_p130 hypothetical protein phrog_3034 unknown function unknown function -1 71298 71666
AGR48911.1 KF188414_p71 hypothetical protein phrog_1622 unknown function unknown function 1 48146 48319
AGR48847.1 KF188414_p7 hypothetical protein phrog_2202 unknown function unknown function -1 1956 2267
AGR48975.1 KF188414_p135 hypothetical protein phrog_2287 unknown function unknown function -1 72984 73220
AGR48906.1 KF188414_p66 Erf protein phrog_155 Erf-like ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 45908 46630
AGR48978.1 KF188414_p138 hypothetical protein phrog_1438 unknown function unknown function -1 74185 74358
AGR48884.1 KF188414_p44 hypothetical protein phrog_861 site-specific recombination directionality factor RDF integration and excision -1 36349 36516
AGR48929.1 KF188414_p89 hypothetical protein phrog_1590 unknown function unknown function 1 56328 57131
AGR48917.1 KF188414_p77 hypothetical protein phrog_572 unknown function unknown function 1 50134 50484
AGR48974.1 KF188414_p134 hypothetical protein phrog_3730 unknown function unknown function -1 72869 72994
AGR48977.1 KF188414_p137 hypothetical protein phrog_3174 unknown function unknown function -1 73788 74180
AGR48865.1 KF188414_p25 minor tail protein phrog_346 minor tail protein tail 1 22283 24679
AGR48959.1 KF188414_p119 hypothetical protein phrog_2174 unknown function unknown function 1 68482 68895
AGR48868.1 KF188414_p28 hypothetical protein phrog_644 unknown function unknown function 1 28541 28969
AGR48859.1 KF188414_p19 tail assembly chaperone phrog_621 tail assembly chaperone tail 1 12469 12930
AGR48945.1 KF188414_p105 hypothetical protein phrog_1042 unknown function unknown function 1 63757 64020
AGR48948.1 KF188414_p108 hypothetical protein phrog_801 dATP / dGTP pyrophosphohydrolase DNA, RNA and nucleotide metabolism 1 64712 65305
AGR48877.1 KF188414_p37 HNH endonuclease phrog_1492 HNH endonuclease DNA, RNA and nucleotide metabolism -1 33534 34121
AGR48914.1 KF188414_p74 HNH endonuclease domain protein phrog_740 HNH endonuclease DNA, RNA and nucleotide metabolism 1 48962 49279
AGR48881.1 KF188414_p41 hypothetical protein phrog_722 unknown function unknown function -1 35336 35824
AGR48852.1 KF188414_p12 major capsid protein phrog_10 major head protein head and packaging 1 7927 9420
AGR48854.1 KF188414_p14 hypothetical protein phrog_442 head-tail adaptor connector 1 9678 10244
AGR48892.1 KF188414_p52 hypothetical protein phrog_950 unknown function unknown function -1 39594 40367
AGR48949.1 KF188414_p109 DnaQ-like exonuclease phrog_403 DNA polymerase exonuclease subunit DNA, RNA and nucleotide metabolism 1 65316 66101
AGR48895.1 KF188414_p55 hypothetical protein phrog_2852 unknown function unknown function 1 41214 41351
AGR48926.1 KF188414_p86 hypothetical protein phrog_2495 unknown function unknown function 1 54488 54856
AGR48880.1 KF188414_p40 hypothetical protein phrog_647 unknown function unknown function -1 34872 35339
AGR48981.1 KF188414_p141 hypothetical protein phrog_2904 unknown function unknown function 1 74917 75264
AGR48918.1 KF188414_p78 DnaB-like helicase phrog_19 DnaB-like replicative helicase DNA, RNA and nucleotide metabolism 1 50477 51739
AGR48932.1 KF188414_p92 hypothetical protein phrog_889 unknown function unknown function 1 57560 58012
AGR48871.1 KF188414_p31 lysin A phrog_317 endolysin lysis 1 29702 31135
AGR48972.1 KF188414_p132 hypothetical protein phrog_1587 unknown function unknown function -1 72136 72465
AGR48841.1 KF188414_p1 hypothetical protein phrog_4110 unknown function unknown function 1 267 449
AGR48950.1 KF188414_p110 hypothetical protein phrog_3647 unknown function unknown function 1 66098 66250
AGR48858.1 KF188414_p18 major tail subunit phrog_476 major tail protein tail 1 11378 12349
AGR48912.1 KF188414_p72 hypothetical protein phrog_2793 unknown function unknown function 1 48322 48555
AGR48922.1 KF188414_p82 hypothetical protein phrog_3836 unknown function unknown function 1 52370 52735
AGR48860.1 KF188414_p20 tail assembly chaperone phrog_5940 tail assembly chaperone tail 1 13062 13340
AGR48938.1 KF188414_p98 Clp protease phrog_94 head maturation protease head and packaging 1 60753 61559
AGR48896.1 KF188414_p56 pentapeptide repeat family protein phrog_923 unknown function unknown function 1 41348 42193
AGR48980.1 KF188414_p140 hypothetical protein phrog_2795 unknown function unknown function -1 74597 74881
AGR48870.1 KF188414_p30 hypothetical protein phrog_411 unknown function unknown function 1 29275 29559
AGR48872.1 KF188414_p32 holin phrog_526 holin lysis 1 31139 31522
AGR48900.1 KF188414_p60 hypothetical protein phrog_3463 unknown function unknown function 1 43484 43591
AGR48933.1 KF188414_p93 hypothetical protein phrog_7833 unknown function unknown function 1 58016 58138
AGR48903.1 KF188414_p63 hypothetical protein phrog_762 unknown function unknown function 1 44214 44543
AGR48902.1 KF188414_p62 hypothetical protein phrog_2221 unknown function unknown function 1 43832 43993
AGR48848.1 KF188414_p8 terminase large subunit phrog_9 terminase large subunit head and packaging 1 2303 4966
AGR48908.1 KF188414_p68 hypothetical protein phrog_2771 unknown function unknown function 1 46934 47404
AGR48979.1 KF188414_p139 hypothetical protein phrog_2772 unknown function unknown function -1 74355 74591
AGR48850.1 KF188414_p10 portal protein phrog_12 portal protein head and packaging 1 5183 6742
AGR48893.1 KF188414_p53 immunity repressor phrog_2745 transcriptional repressor transcription regulation -1 40462 40893
AGR48924.1 KF188414_p84 hypothetical protein phrog_2894 unknown function unknown function 1 53091 53285
AGR48952.1 KF188414_p112 hypothetical protein phrog_6210 unknown function unknown function 1 66453 66542
AGR48928.1 KF188414_p88 RNA ligase phrog_968 RNA ligase DNA, RNA and nucleotide metabolism 1 54948 56273
AGR48890.1 KF188414_p50 integrase phrog_1 integrase integration and excision 1 38357 39238
AGR48931.1 KF188414_p91 hypothetical protein phrog_2853 unknown function unknown function 1 57405 57563
AGR48946.1 KF188414_p106 hypothetical protein phrog_355 nucleoside 2-deoxyribosyltransferase DNA, RNA and nucleotide metabolism 1 64031 64405
AGR48867.1 KF188414_p27 hypothetical protein phrog_553 minor tail protein tail 1 27517 28461
AGR48944.1 KF188414_p104 hypothetical protein phrog_2846 unknown function unknown function 1 63536 63760
AGR48907.1 KF188414_p67 hypothetical protein phrog_2750 unknown function unknown function 1 46623 46934
AGR48956.1 KF188414_p116 hypothetical protein phrog_2755 unknown function unknown function 1 67872 68045
AGR48920.1 KF188414_p80 hypothetical protein phrog_1821 transcriptional regulator WhiB-like transcription regulation 1 51906 52181
AGR48973.1 KF188414_p133 hypothetical protein phrog_21747 unknown function unknown function -1 72477 72863
AGR48901.1 KF188414_p61 hypothetical protein phrog_2147 unknown function unknown function 1 43599 43832
AGR48844.1 KF188414_p4 hypothetical protein phrog_3858 unknown function unknown function 1 783 1064
AGR48887.1 KF188414_p47 hypothetical protein phrog_2815 unknown function unknown function -1 36976 37122
AGR48964.1 KF188414_p124 hypothetical protein phrog_2897 unknown function unknown function 1 69553 69684
AGR48913.1 KF188414_p73 hypothetical protein phrog_289 GTP-binding domain other 1 48552 48965
AGR48875.1 KF188414_p35 hypothetical protein phrog_726 unknown function unknown function 1 32704 33120
AGR48939.1 KF188414_p99 hypothetical protein phrog_1454 unknown function unknown function 1 61561 61758
AGR48851.1 KF188414_p11 capsid maturation protease phrog_2753 head maturation protease head and packaging 1 6745 7839
AGR48855.1 KF188414_p15 hypothetical protein phrog_1531 head closure connector 1 10257 10592
AGR48930.1 KF188414_p90 WhiB phrog_472 WhiB transcriptional factor transcription regulation 1 57128 57388
AGR48861.1 KF188414_p21 tapemeasure phrog_2723 tail length tape measure protein tail 1 13333 18066
AGR48878.1 KF188414_p38 Lsr2 phrog_1223 nucloid associated Lsr2-like DNA, RNA and nucleotide metabolism -1 34244 34630
AGR48876.1 KF188414_p36 NrdH-like protein phrog_22 thioredoxin domain DNA, RNA and nucleotide metabolism 1 33127 33372
AGR48869.1 KF188414_p29 hypothetical protein phrog_686 HTH DNA binding protein DNA, RNA and nucleotide metabolism -1 28966 29142
AGR48863.1 KF188414_p23 minor tail protein phrog_110 minor tail protein tail 1 19745 21424
AGR48966.1 KF188414_p126 hypothetical protein phrog_686 HTH DNA binding protein DNA, RNA and nucleotide metabolism -1 70208 70471
AGR48923.1 KF188414_p83 hypothetical protein phrog_244 RusA-like Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 52732 53094
AGR48905.1 KF188414_p65 hypothetical protein phrog_572 unknown function unknown function 1 45505 45915
AGR48909.1 KF188414_p69 hypothetical protein phrog_1389 unknown function unknown function 1 47404 47772
AGR48936.1 KF188414_p96 DNA methylase phrog_67 DNA methyltransferase other 1 59011 60231
AGR48971.1 KF188414_p131 hypothetical protein phrog_1915 unknown function unknown function -1 71663 72121
AGR48951.1 KF188414_p111 hypothetical protein phrog_8804 unknown function unknown function 1 66247 66456
AGR48976.1 KF188414_p136 hypothetical protein phrog_2883 unknown function unknown function -1 73236 73784
AGR48916.1 KF188414_p76 hypothetical protein phrog_1882 unknown function unknown function 1 49502 50152
AGR48846.1 KF188414_p6 terminase small subunit phrog_2142 unknown function unknown function 1 1511 1855
AGR48857.1 KF188414_p17 hypothetical protein phrog_813 head-tail adaptor connector 1 10947 11351
AGR48962.1 KF188414_p122 hypothetical protein phrog_2296 unknown function unknown function 1 69240 69377
AGR48940.1 KF188414_p100 hypothetical protein phrog_2785 unknown function unknown function 1 61755 62111
AGR48883.1 KF188414_p43 hypothetical protein phrog_4396 unknown function unknown function -1 36221 36349
AGR48947.1 KF188414_p107 hypothetical protein phrog_4826 unknown function unknown function 1 64405 64722
AGR48934.1 KF188414_p94 hypothetical protein phrog_2788 unknown function unknown function 1 58140 58475
AGR48915.1 KF188414_p75 hypothetical protein phrog_1673 unknown function unknown function 1 49269 49505
AGR48891.1 KF188414_p51 hypothetical protein phrog_2842 unknown function unknown function 1 39377 39616
AGR48862.1 KF188414_p22 minor tail protein phrog_106 minor tail protein tail 1 18096 19757
AGR48983.1 KF188414_p143 HNH endonuclease domain protein phrog_589 HNH endonuclease DNA, RNA and nucleotide metabolism 1 75550 75897
AGR48897.1 KF188414_p57 hypothetical protein phrog_2463 unknown function unknown function 1 42195 42341
AGR48967.1 KF188414_p127 hypothetical protein phrog_2579 ParB C-terminal domain DNA, RNA and nucleotide metabolism -1 70468 70857
AGR48921.1 KF188414_p81 hypothetical protein phrog_2747 unknown function unknown function 1 52156 52377
AGR48898.1 KF188414_p58 hypothetical protein phrog_2800 unknown function unknown function 1 42338 42616
AGR48882.1 KF188414_p42 hypothetical protein phrog_647 unknown function unknown function -1 35817 36113
AGR48910.1 KF188414_p70 hypothetical protein phrog_572 unknown function unknown function 1 47769 48146
AGR48942.1 KF188414_p102 hypothetical protein phrog_1969 unknown function unknown function 1 62428 62739
AGR48919.1 KF188414_p79 hypothetical protein phrog_1091 unknown function unknown function 1 51736 51924
AGR48943.1 KF188414_p103 hypothetical protein phrog_959 HNH endonuclease DNA, RNA and nucleotide metabolism 1 62792 63082
AGR48885.1 KF188414_p45 hypothetical protein phrog_2893 unknown function unknown function -1 36513 36683
AGR48879.1 KF188414_p39 hypothetical protein phrog_3481 unknown function unknown function -1 34678 34869
AGR48982.1 KF188414_p142 hypothetical protein phrog_2762 unknown function unknown function 1 75339 75560
AGR48842.1 KF188414_p2 hypothetical protein phrog_2829 unknown function unknown function 1 446 604
AGR48941.1 KF188414_p101 hypothetical protein phrog_2757 unknown function unknown function 1 62112 62423
AGR48954.1 KF188414_p114 RecA phrog_97 UvsX-like recombinase other 1 66789 67751
AGR48925.1 KF188414_p85 Pnk phrog_505 polynucleotide kinase other 1 53440 54381
AGR48958.1 KF188414_p118 hypothetical protein phrog_3062 unknown function unknown function 1 68231 68485
AGR48953.1 KF188414_p113 hypothetical protein phrog_1941 unknown function unknown function 1 66539 66781
AGR48853.1 KF188414_p13 hypothetical protein phrog_2796 head-tail connector protein connector 1 9487 9678
AGR48969.1 KF188414_p129 hypothetical protein phrog_8201 unknown function unknown function -1 71227 71301
AGR48843.1 KF188414_p3 hypothetical protein phrog_2775 unknown function unknown function 1 601 786
AGR48874.1 KF188414_p34 lysin B phrog_102 endolysin lysis 1 31850 32707
AGR48955.1 KF188414_p115 hypothetical protein phrog_2965 unknown function unknown function 1 67748 67885
AGR48873.1 KF188414_p33 hypothetical protein phrog_2424 unknown function unknown function 1 31515 31853
AGR48849.1 KF188414_p9 hypothetical protein phrog_2845 unknown function unknown function 1 4978 5199
AGR48957.1 KF188414_p117 hypothetical protein phrog_2279 unknown function unknown function 1 68038 68250
AGR48889.1 KF188414_p49 hypothetical protein phrog_2847 unknown function unknown function -1 37804 38106
AGR48961.1 KF188414_p121 hypothetical protein phrog_2823 unknown function unknown function 1 69043 69243
AGR48937.1 KF188414_p97 ssDNA binding protein phrog_44 single strand DNA binding protein DNA, RNA and nucleotide metabolism 1 60224 60664
AGR48935.1 KF188414_p95 hypothetical protein phrog_1568 DNA binding protein DNA, RNA and nucleotide metabolism 1 58508 59014
AGR48894.1 KF188414_p54 hypothetical protein phrog_3071 unknown function unknown function 1 41119 41217
AGR48886.1 KF188414_p46 hypothetical protein phrog_2702 unknown function unknown function -1 36742 36957
AGR48904.1 KF188414_p64 hypothetical protein phrog_466 exonuclease DNA, RNA and nucleotide metabolism 1 44540 45508
AGR48845.1 KF188414_p5 hypothetical protein phrog_83 terminase small subunit head and packaging 1 1057 1518