Genomic map of Mycobacterium phage SargentShorty9 (KF279416)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
KF279416
Definition
Mycobacterium phage SargentShorty9, complete genome.
Molecule type
DNA
Genome structure
circular
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Fromanvirus; unclassified Fromanvirus.
DB of origin
PVOG
Length
53693
Host Name
Mycobacterium smegmatis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
100
%GC
63.68
Number of singletons
4
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
AGU92373.1 KF279416_p73 hypothetical protein phrog_12594 unknown function unknown function -1 45436 45603
AGU92402.1 KF279416_p98 hypothetical protein phrog_17708 unknown function unknown function 1 52453 52614
AGU92361.1 KF279416_p56 metagenomic prevalent protein phrog_474 phosphofructokinase other -1 38207 38608
AGU92317.1 KF279416_p10 hypothetical protein phrog_747 unknown function unknown function 1 4174 4431
AGU92403.1 KF279416_p100 hypothetical protein phrog_15488 unknown function unknown function -1 53019 53636
AGU92339.1 KF279416_p33 hypothetical protein phrog_1397 unknown function unknown function 1 23817 24143
AGU92375.1 KF279416_p75 hypothetical protein phrog_11473 HTH DNA binding protein DNA, RNA and nucleotide metabolism -1 45900 46382
AGU92364.1 KF279416_p61 hypothetical protein phrog_397 unknown function unknown function -1 40437 40571
AGU92380.1 KF279416_p81 RDF protein phrog_439 site-specific recombination directionality factor RDF integration and excision -1 48430 48729
AGU92356.1 KF279416_p51 hypothetical protein phrog_499 unknown function unknown function -1 35214 35396
AGU92333.1 KF279416_p26 hypothetical protein phrog_3656 tail assembly chaperone tail 1 16024 16395
AGU92386.1 KF279416_p88 HNH endonuclease phrog_11336 HNH endonuclease DNA, RNA and nucleotide metabolism -1 50159 50353
AGU92331.1 KF279416_p24 structural protein phrog_117 major tail protein tail 1 14622 15473
AGU92374.1 KF279416_p74 hypothetical protein phrog_12774 unknown function unknown function -1 45615 45887
AGU92338.1 KF279416_p31 hypothetical protein phrog_352 minor tail protein tail 1 23009 23455
AGU92371.1 KF279416_p70 hypothetical protein phrog_1763 HTH DNA binding protein DNA, RNA and nucleotide metabolism -1 44179 44361
AGU92349.1 KF279416_p44 hypothetical protein phrog_2035 unknown function unknown function -1 31703 31873
AGU92313.1 KF279416_p5 hypothetical protein phrog_2830 unknown function unknown function 1 1539 1850
AGU92346.1 KF279416_p40 hypothetical protein phrog_411 unknown function unknown function 1 29184 29468
AGU92384.1 KF279416_p85 HNH endonuclease phrog_3447 unknown function unknown function -1 49565 49777
AGU92314.1 KF279416_p7 tail fiber-like protein phrog_1197 tail protein tail 1 2111 3181
AGU92330.1 KF279416_p23 hypothetical protein phrog_123 tail terminator connector 1 14167 14613
AGU92324.1 KF279416_p17 scaffold protein phrog_233 head scaffolding protein head and packaging 1 11115 11627
AGU92397.1 KF279416_p6 hypothetical protein singleton unknown function unknown function 1 1825 1992
AGU92401.1 KF279416_p92 hypothetical protein phrog_17684 unknown function unknown function -1 50953 51066
AGU92393.1 KF279416_p97 hypothetical protein phrog_828 unknown function unknown function 1 52199 52405
AGU92347.1 KF279416_p41 integrase phrog_95 integrase integration and excision 1 29531 31123
AGU92316.1 KF279416_p9 tail fiber-like protein phrog_1718 tail protein tail 1 3906 4166
AGU92322.1 KF279416_p15 portal protein phrog_104 portal protein head and packaging 1 8737 10179
AGU92400.1 KF279416_p76 hypothetical protein phrog_14169 zinc-finger domain protein other -1 46372 46581
AGU92391.1 KF279416_p95 hypothetical protein phrog_2212 unknown function unknown function -1 51726 51845
AGU92342.1 KF279416_p36 structural protein phrog_16290 minor tail protein tail 1 27074 27493
AGU92359.1 KF279416_p54 RDF protein phrog_221 metallo-phosphoesterase other -1 36316 38034
AGU92382.1 KF279416_p83 hypothetical protein phrog_1720 unknown function unknown function -1 49099 49368
AGU92336.1 KF279416_p29 RDF protein phrog_1543 minor tail protein tail 1 20987 21169
AGU92408.1 KF279416_p71 RecB phrog_69 exonuclease DNA, RNA and nucleotide metabolism -1 44388 45191
AGU92328.1 KF279416_p21 hypothetical protein phrog_320 head closure Hc1 connector 1 13406 13768
AGU92392.1 KF279416_p96 hypothetical protein phrog_2985 unknown function unknown function 1 51877 52116
AGU92348.1 KF279416_p43 hypothetical protein phrog_1966 unknown function unknown function -1 31380 31706
AGU92381.1 KF279416_p82 RDF protein phrog_16071 unknown function unknown function -1 48722 49102
AGU92344.1 KF279416_p38 hypothetical protein phrog_1560 unknown function unknown function 1 27916 28107
AGU92337.1 KF279416_p30 minor tail protein phrog_110 minor tail protein tail 1 21169 22971
AGU92369.1 KF279416_p68 hypothetical protein phrog_780 unknown function unknown function -1 43637 43882
AGU92358.1 KF279416_p53 RDF protein phrog_1782 site-specific recombination directionality factor RDF integration and excision -1 36171 36311
AGU92319.1 KF279416_p12 hypothetical protein phrog_21042 unknown function unknown function 1 5858 6064
AGU92372.1 KF279416_p72 hypothetical protein phrog_13492 unknown function unknown function -1 45188 45439
AGU92318.1 KF279416_p11 lysozyme phrog_317 endolysin lysis 1 4431 5858
AGU92334.1 KF279416_p27 tapemeasure protein phrog_305 tail length tape measure protein tail 1 16407 18887
AGU92379.1 KF279416_p80 repressor phrog_357 transcriptional repressor transcription regulation -1 47643 48329
AGU92383.1 KF279416_p84 hypothetical protein phrog_1387 unknown function unknown function -1 49365 49568
AGU92366.1 KF279416_p63 EndoVII phrog_307 endonuclease VII DNA, RNA and nucleotide metabolism -1 41820 42362
AGU92354.1 KF279416_p49 hypothetical protein phrog_1781 unknown function unknown function -1 34477 34707
AGU92406.1 KF279416_p65 glutaredoxin phrog_22 thioredoxin domain DNA, RNA and nucleotide metabolism -1 42432 42701
AGU92410.1 KF279416_p94 hypothetical protein phrog_5533 unknown function unknown function -1 51511 51729
AGU92385.1 KF279416_p86 hypothetical protein phrog_1155 unknown function unknown function -1 49774 49962
AGU92325.1 KF279416_p18 major head protein phrog_10 major head protein head and packaging 1 11637 12635
AGU92362.1 KF279416_p57 hypothetical protein phrog_5618 unknown function unknown function -1 38605 38931
AGU92320.1 KF279416_p13 lysin B phrog_102 endolysin lysis 1 6064 7032
AGU92360.1 KF279416_p55 metagenomic prevalent protein phrog_1503 unknown function unknown function -1 38031 38210
AGU92407.1 KF279416_p67 RDF protein phrog_1705 unknown function unknown function -1 43494 43640
AGU92357.1 KF279416_p52 hypothetical protein phrog_354 sigma-K factor transcription regulation -1 35393 36178
AGU92387.1 KF279416_p89 hypothetical protein phrog_8345 unknown function unknown function -1 50350 50556
AGU92311.1 KF279416_p3 WhiB/HNH protein phrog_333 HNH endonuclease DNA, RNA and nucleotide metabolism 1 533 892
AGU92345.1 KF279416_p39 structural protein phrog_754 minor tail protein tail 1 28104 29063
AGU92353.1 KF279416_p48 DNA polymerase I phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism -1 32614 34440
AGU92405.1 KF279416_p60 metagenomic prevalent protein phrog_1783 unknown function unknown function -1 40211 40375
AGU92367.1 KF279416_p64 hypothetical protein phrog_1019 unknown function unknown function -1 42349 42435
AGU92399.1 KF279416_p59 hypothetical protein phrog_4160 unknown function unknown function -1 39768 40232
AGU92312.1 KF279416_p4 tail protein phrog_226 minor tail protein tail 1 927 1367
AGU92355.1 KF279416_p50 hypothetical protein phrog_364 ribonucleoside reductase class II DNA, RNA and nucleotide metabolism -1 34738 35217
AGU92368.1 KF279416_p66 DnaB-like helicase phrog_243 DnaB-like replicative helicase DNA, RNA and nucleotide metabolism -1 42698 43507
AGU92329.1 KF279416_p22 hypothetical protein phrog_321 tail completion or Neck1 protein connector 1 13768 14163
AGU92340.1 KF279416_p34 structural protein phrog_346 minor tail protein tail 1 24168 26021
AGU92326.1 KF279416_p19 structural protein phrog_1857 head-tail connector protein connector 1 12721 12957
AGU92376.1 KF279416_p77 hypothetical protein phrog_1584 unknown function unknown function -1 46578 46895
AGU92378.1 KF279416_p79 hypothetical protein phrog_1809 unknown function unknown function -1 47206 47610
AGU92388.1 KF279416_p90 HNH endonuclease phrog_932 unknown function unknown function -1 50576 50725
AGU92409.1 KF279416_p87 RDF protein phrog_861 site-specific recombination directionality factor RDF integration and excision -1 49962 50162
AGU92323.1 KF279416_p16 protease phrog_193 head maturation protease head and packaging 1 10176 11057
AGU92341.1 KF279416_p35 structural protein phrog_382 minor tail protein with lysin activity tail 1 26014 27051
AGU92370.1 KF279416_p69 hypothetical protein phrog_520 unknown function unknown function -1 43882 44175
AGU92315.1 KF279416_p8 structural protein phrog_553 minor tail protein tail 1 3191 3892
AGU92394.1 KF279416_p99 hypothetical protein phrog_3574 unknown function unknown function 1 52640 52906
AGU92404.1 KF279416_p32 hypothetical protein phrog_981 minor tail protein tail 1 23452 23799
AGU92352.1 KF279416_p47 hypothetical protein phrog_383 unknown function unknown function -1 32228 32593
AGU92351.1 KF279416_p46 hypothetical protein phrog_1971 unknown function unknown function -1 31962 32231
AGU92332.1 KF279416_p25 hypothetical protein phrog_330 tail assembly chaperone tail 1 15533 15973
AGU92390.1 KF279416_p93 hypothetical protein phrog_5017 unknown function unknown function -1 51164 51511
AGU92398.1 KF279416_p42 hypothetical protein singleton unknown function unknown function -1 31198 31380
AGU92327.1 KF279416_p20 hypothetical protein phrog_137 head-tail adaptor Ad1 connector 1 12957 13406
AGU92389.1 KF279416_p91 hypothetical protein phrog_17848 unknown function unknown function -1 50722 50892
AGU92363.1 KF279416_p58 DNA primase phrog_47 DNA primase DNA, RNA and nucleotide metabolism -1 38928 39452
AGU92343.1 KF279416_p37 MuL-like protein phrog_644 unknown function unknown function 1 27586 27906
AGU92377.1 KF279416_p78 hypothetical protein phrog_3851 unknown function unknown function -1 46892 47209
AGU92335.1 KF279416_p28 tail protein phrog_106 minor tail protein tail 1 18911 20968
AGU92365.1 KF279416_p62 DNA methylase/helicase phrog_67 DNA methyltransferase other -1 40597 41823
AGU92396.1 KF279416_p2 hypothetical protein singleton unknown function unknown function 1 370 486
AGU92350.1 KF279416_p45 RDF protein phrog_1860 unknown function unknown function -1 31870 31965
AGU92395.1 KF279416_p1 hypothetical protein singleton unknown function unknown function 1 105 293
AGU92321.1 KF279416_p14 terminase phrog_9 terminase large subunit head and packaging 1 7052 8740