| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
KF279416 |
Definition |
Mycobacterium phage SargentShorty9, complete genome. |
Molecule type |
DNA |
Genome structure |
circular |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Fromanvirus; unclassified Fromanvirus. |
DB of origin |
PVOG |
Length |
53693 |
Host Name |
Mycobacterium smegmatis |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
100 |
%GC |
63.68 |
Number of singletons |
4 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| AGU92373.1 | KF279416_p73 | hypothetical protein | phrog_12594 | unknown function | unknown function | -1 | 45436 | 45603 |
| AGU92402.1 | KF279416_p98 | hypothetical protein | phrog_17708 | unknown function | unknown function | 1 | 52453 | 52614 |
| AGU92361.1 | KF279416_p56 | metagenomic prevalent protein | phrog_474 | phosphofructokinase | other | -1 | 38207 | 38608 |
| AGU92317.1 | KF279416_p10 | hypothetical protein | phrog_747 | unknown function | unknown function | 1 | 4174 | 4431 |
| AGU92403.1 | KF279416_p100 | hypothetical protein | phrog_15488 | unknown function | unknown function | -1 | 53019 | 53636 |
| AGU92339.1 | KF279416_p33 | hypothetical protein | phrog_1397 | unknown function | unknown function | 1 | 23817 | 24143 |
| AGU92375.1 | KF279416_p75 | hypothetical protein | phrog_11473 | HTH DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 45900 | 46382 |
| AGU92364.1 | KF279416_p61 | hypothetical protein | phrog_397 | unknown function | unknown function | -1 | 40437 | 40571 |
| AGU92380.1 | KF279416_p81 | RDF protein | phrog_439 | site-specific recombination directionality factor RDF | integration and excision | -1 | 48430 | 48729 |
| AGU92356.1 | KF279416_p51 | hypothetical protein | phrog_499 | unknown function | unknown function | -1 | 35214 | 35396 |
| AGU92333.1 | KF279416_p26 | hypothetical protein | phrog_3656 | tail assembly chaperone | tail | 1 | 16024 | 16395 |
| AGU92386.1 | KF279416_p88 | HNH endonuclease | phrog_11336 | HNH endonuclease | DNA, RNA and nucleotide metabolism | -1 | 50159 | 50353 |
| AGU92331.1 | KF279416_p24 | structural protein | phrog_117 | major tail protein | tail | 1 | 14622 | 15473 |
| AGU92374.1 | KF279416_p74 | hypothetical protein | phrog_12774 | unknown function | unknown function | -1 | 45615 | 45887 |
| AGU92338.1 | KF279416_p31 | hypothetical protein | phrog_352 | minor tail protein | tail | 1 | 23009 | 23455 |
| AGU92371.1 | KF279416_p70 | hypothetical protein | phrog_1763 | HTH DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 44179 | 44361 |
| AGU92349.1 | KF279416_p44 | hypothetical protein | phrog_2035 | unknown function | unknown function | -1 | 31703 | 31873 |
| AGU92313.1 | KF279416_p5 | hypothetical protein | phrog_2830 | unknown function | unknown function | 1 | 1539 | 1850 |
| AGU92346.1 | KF279416_p40 | hypothetical protein | phrog_411 | unknown function | unknown function | 1 | 29184 | 29468 |
| AGU92384.1 | KF279416_p85 | HNH endonuclease | phrog_3447 | unknown function | unknown function | -1 | 49565 | 49777 |
| AGU92314.1 | KF279416_p7 | tail fiber-like protein | phrog_1197 | tail protein | tail | 1 | 2111 | 3181 |
| AGU92330.1 | KF279416_p23 | hypothetical protein | phrog_123 | tail terminator | connector | 1 | 14167 | 14613 |
| AGU92324.1 | KF279416_p17 | scaffold protein | phrog_233 | head scaffolding protein | head and packaging | 1 | 11115 | 11627 |
| AGU92397.1 | KF279416_p6 | hypothetical protein | singleton | unknown function | unknown function | 1 | 1825 | 1992 |
| AGU92401.1 | KF279416_p92 | hypothetical protein | phrog_17684 | unknown function | unknown function | -1 | 50953 | 51066 |
| AGU92393.1 | KF279416_p97 | hypothetical protein | phrog_828 | unknown function | unknown function | 1 | 52199 | 52405 |
| AGU92347.1 | KF279416_p41 | integrase | phrog_95 | integrase | integration and excision | 1 | 29531 | 31123 |
| AGU92316.1 | KF279416_p9 | tail fiber-like protein | phrog_1718 | tail protein | tail | 1 | 3906 | 4166 |
| AGU92322.1 | KF279416_p15 | portal protein | phrog_104 | portal protein | head and packaging | 1 | 8737 | 10179 |
| AGU92400.1 | KF279416_p76 | hypothetical protein | phrog_14169 | zinc-finger domain protein | other | -1 | 46372 | 46581 |
| AGU92391.1 | KF279416_p95 | hypothetical protein | phrog_2212 | unknown function | unknown function | -1 | 51726 | 51845 |
| AGU92342.1 | KF279416_p36 | structural protein | phrog_16290 | minor tail protein | tail | 1 | 27074 | 27493 |
| AGU92359.1 | KF279416_p54 | RDF protein | phrog_221 | metallo-phosphoesterase | other | -1 | 36316 | 38034 |
| AGU92382.1 | KF279416_p83 | hypothetical protein | phrog_1720 | unknown function | unknown function | -1 | 49099 | 49368 |
| AGU92336.1 | KF279416_p29 | RDF protein | phrog_1543 | minor tail protein | tail | 1 | 20987 | 21169 |
| AGU92408.1 | KF279416_p71 | RecB | phrog_69 | exonuclease | DNA, RNA and nucleotide metabolism | -1 | 44388 | 45191 |
| AGU92328.1 | KF279416_p21 | hypothetical protein | phrog_320 | head closure Hc1 | connector | 1 | 13406 | 13768 |
| AGU92392.1 | KF279416_p96 | hypothetical protein | phrog_2985 | unknown function | unknown function | 1 | 51877 | 52116 |
| AGU92348.1 | KF279416_p43 | hypothetical protein | phrog_1966 | unknown function | unknown function | -1 | 31380 | 31706 |
| AGU92381.1 | KF279416_p82 | RDF protein | phrog_16071 | unknown function | unknown function | -1 | 48722 | 49102 |
| AGU92344.1 | KF279416_p38 | hypothetical protein | phrog_1560 | unknown function | unknown function | 1 | 27916 | 28107 |
| AGU92337.1 | KF279416_p30 | minor tail protein | phrog_110 | minor tail protein | tail | 1 | 21169 | 22971 |
| AGU92369.1 | KF279416_p68 | hypothetical protein | phrog_780 | unknown function | unknown function | -1 | 43637 | 43882 |
| AGU92358.1 | KF279416_p53 | RDF protein | phrog_1782 | site-specific recombination directionality factor RDF | integration and excision | -1 | 36171 | 36311 |
| AGU92319.1 | KF279416_p12 | hypothetical protein | phrog_21042 | unknown function | unknown function | 1 | 5858 | 6064 |
| AGU92372.1 | KF279416_p72 | hypothetical protein | phrog_13492 | unknown function | unknown function | -1 | 45188 | 45439 |
| AGU92318.1 | KF279416_p11 | lysozyme | phrog_317 | endolysin | lysis | 1 | 4431 | 5858 |
| AGU92334.1 | KF279416_p27 | tapemeasure protein | phrog_305 | tail length tape measure protein | tail | 1 | 16407 | 18887 |
| AGU92379.1 | KF279416_p80 | repressor | phrog_357 | transcriptional repressor | transcription regulation | -1 | 47643 | 48329 |
| AGU92383.1 | KF279416_p84 | hypothetical protein | phrog_1387 | unknown function | unknown function | -1 | 49365 | 49568 |
| AGU92366.1 | KF279416_p63 | EndoVII | phrog_307 | endonuclease VII | DNA, RNA and nucleotide metabolism | -1 | 41820 | 42362 |
| AGU92354.1 | KF279416_p49 | hypothetical protein | phrog_1781 | unknown function | unknown function | -1 | 34477 | 34707 |
| AGU92406.1 | KF279416_p65 | glutaredoxin | phrog_22 | thioredoxin domain | DNA, RNA and nucleotide metabolism | -1 | 42432 | 42701 |
| AGU92410.1 | KF279416_p94 | hypothetical protein | phrog_5533 | unknown function | unknown function | -1 | 51511 | 51729 |
| AGU92385.1 | KF279416_p86 | hypothetical protein | phrog_1155 | unknown function | unknown function | -1 | 49774 | 49962 |
| AGU92325.1 | KF279416_p18 | major head protein | phrog_10 | major head protein | head and packaging | 1 | 11637 | 12635 |
| AGU92362.1 | KF279416_p57 | hypothetical protein | phrog_5618 | unknown function | unknown function | -1 | 38605 | 38931 |
| AGU92320.1 | KF279416_p13 | lysin B | phrog_102 | endolysin | lysis | 1 | 6064 | 7032 |
| AGU92360.1 | KF279416_p55 | metagenomic prevalent protein | phrog_1503 | unknown function | unknown function | -1 | 38031 | 38210 |
| AGU92407.1 | KF279416_p67 | RDF protein | phrog_1705 | unknown function | unknown function | -1 | 43494 | 43640 |
| AGU92357.1 | KF279416_p52 | hypothetical protein | phrog_354 | sigma-K factor | transcription regulation | -1 | 35393 | 36178 |
| AGU92387.1 | KF279416_p89 | hypothetical protein | phrog_8345 | unknown function | unknown function | -1 | 50350 | 50556 |
| AGU92311.1 | KF279416_p3 | WhiB/HNH protein | phrog_333 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 533 | 892 |
| AGU92345.1 | KF279416_p39 | structural protein | phrog_754 | minor tail protein | tail | 1 | 28104 | 29063 |
| AGU92353.1 | KF279416_p48 | DNA polymerase I | phrog_17 | DNA polymerase | DNA, RNA and nucleotide metabolism | -1 | 32614 | 34440 |
| AGU92405.1 | KF279416_p60 | metagenomic prevalent protein | phrog_1783 | unknown function | unknown function | -1 | 40211 | 40375 |
| AGU92367.1 | KF279416_p64 | hypothetical protein | phrog_1019 | unknown function | unknown function | -1 | 42349 | 42435 |
| AGU92399.1 | KF279416_p59 | hypothetical protein | phrog_4160 | unknown function | unknown function | -1 | 39768 | 40232 |
| AGU92312.1 | KF279416_p4 | tail protein | phrog_226 | minor tail protein | tail | 1 | 927 | 1367 |
| AGU92355.1 | KF279416_p50 | hypothetical protein | phrog_364 | ribonucleoside reductase class II | DNA, RNA and nucleotide metabolism | -1 | 34738 | 35217 |
| AGU92368.1 | KF279416_p66 | DnaB-like helicase | phrog_243 | DnaB-like replicative helicase | DNA, RNA and nucleotide metabolism | -1 | 42698 | 43507 |
| AGU92329.1 | KF279416_p22 | hypothetical protein | phrog_321 | tail completion or Neck1 protein | connector | 1 | 13768 | 14163 |
| AGU92340.1 | KF279416_p34 | structural protein | phrog_346 | minor tail protein | tail | 1 | 24168 | 26021 |
| AGU92326.1 | KF279416_p19 | structural protein | phrog_1857 | head-tail connector protein | connector | 1 | 12721 | 12957 |
| AGU92376.1 | KF279416_p77 | hypothetical protein | phrog_1584 | unknown function | unknown function | -1 | 46578 | 46895 |
| AGU92378.1 | KF279416_p79 | hypothetical protein | phrog_1809 | unknown function | unknown function | -1 | 47206 | 47610 |
| AGU92388.1 | KF279416_p90 | HNH endonuclease | phrog_932 | unknown function | unknown function | -1 | 50576 | 50725 |
| AGU92409.1 | KF279416_p87 | RDF protein | phrog_861 | site-specific recombination directionality factor RDF | integration and excision | -1 | 49962 | 50162 |
| AGU92323.1 | KF279416_p16 | protease | phrog_193 | head maturation protease | head and packaging | 1 | 10176 | 11057 |
| AGU92341.1 | KF279416_p35 | structural protein | phrog_382 | minor tail protein with lysin activity | tail | 1 | 26014 | 27051 |
| AGU92370.1 | KF279416_p69 | hypothetical protein | phrog_520 | unknown function | unknown function | -1 | 43882 | 44175 |
| AGU92315.1 | KF279416_p8 | structural protein | phrog_553 | minor tail protein | tail | 1 | 3191 | 3892 |
| AGU92394.1 | KF279416_p99 | hypothetical protein | phrog_3574 | unknown function | unknown function | 1 | 52640 | 52906 |
| AGU92404.1 | KF279416_p32 | hypothetical protein | phrog_981 | minor tail protein | tail | 1 | 23452 | 23799 |
| AGU92352.1 | KF279416_p47 | hypothetical protein | phrog_383 | unknown function | unknown function | -1 | 32228 | 32593 |
| AGU92351.1 | KF279416_p46 | hypothetical protein | phrog_1971 | unknown function | unknown function | -1 | 31962 | 32231 |
| AGU92332.1 | KF279416_p25 | hypothetical protein | phrog_330 | tail assembly chaperone | tail | 1 | 15533 | 15973 |
| AGU92390.1 | KF279416_p93 | hypothetical protein | phrog_5017 | unknown function | unknown function | -1 | 51164 | 51511 |
| AGU92398.1 | KF279416_p42 | hypothetical protein | singleton | unknown function | unknown function | -1 | 31198 | 31380 |
| AGU92327.1 | KF279416_p20 | hypothetical protein | phrog_137 | head-tail adaptor Ad1 | connector | 1 | 12957 | 13406 |
| AGU92389.1 | KF279416_p91 | hypothetical protein | phrog_17848 | unknown function | unknown function | -1 | 50722 | 50892 |
| AGU92363.1 | KF279416_p58 | DNA primase | phrog_47 | DNA primase | DNA, RNA and nucleotide metabolism | -1 | 38928 | 39452 |
| AGU92343.1 | KF279416_p37 | MuL-like protein | phrog_644 | unknown function | unknown function | 1 | 27586 | 27906 |
| AGU92377.1 | KF279416_p78 | hypothetical protein | phrog_3851 | unknown function | unknown function | -1 | 46892 | 47209 |
| AGU92335.1 | KF279416_p28 | tail protein | phrog_106 | minor tail protein | tail | 1 | 18911 | 20968 |
| AGU92365.1 | KF279416_p62 | DNA methylase/helicase | phrog_67 | DNA methyltransferase | other | -1 | 40597 | 41823 |
| AGU92396.1 | KF279416_p2 | hypothetical protein | singleton | unknown function | unknown function | 1 | 370 | 486 |
| AGU92350.1 | KF279416_p45 | RDF protein | phrog_1860 | unknown function | unknown function | -1 | 31870 | 31965 |
| AGU92395.1 | KF279416_p1 | hypothetical protein | singleton | unknown function | unknown function | 1 | 105 | 293 |
| AGU92321.1 | KF279416_p14 | terminase | phrog_9 | terminase large subunit | head and packaging | 1 | 7052 | 8740 |