Genomic map of Xylella phage Salvo (KF626668)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
KF626668
Definition
Phage Salvo, complete genome.
Molecule type
DNA
Genome structure
circular
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Sanovirus; Xylella virus Salvo.
DB of origin
PVOG
Length
55601
Host Name
Xylella fastidiosa
Host domain
Bacteria
Is prophage?
undef
Number of proteins
72
%GC
63.04
Number of singletons
16
Number of paralogs
2

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
AHB12230.1 KF626668_p30 hypothetical protein phrog_1017 unknown function unknown function 1 14409 14852
AHB12215.1 KF626668_p15 hypothetical protein phrog_20256 unknown function unknown function 1 7635 7874
AHB12239.1 KF626668_p39 tail fiber protein phrog_24534 tail fiber protein tail -1 19888 20940
AHB12219.1 KF626668_p19 hypothetical protein phrog_28498 unknown function unknown function 1 8944 9276
AHB12258.1 KF626668_p58 prohead protease phrog_53 head maturation protease head and packaging -1 39244 40602
AHB12240.1 KF626668_p40 tail assembly protein phrog_9600 tail assembly protein tail -1 20947 21915
AHB12209.1 KF626668_p9 hypothetical protein singleton unknown function unknown function 1 4177 4326
AHB12210.1 KF626668_p10 hypothetical protein singleton unknown function unknown function 1 4323 4430
AHB12245.1 KF626668_p45 tail assembly protein phrog_1082 tail assembly protein tail -1 26165 27877
AHB12253.1 KF626668_p53 hypothetical protein phrog_27 tail completion or Neck1 protein connector -1 36311 36943
AHB12228.1 KF626668_p28 hypothetical protein singleton unknown function unknown function 1 13530 13820
AHB12256.1 KF626668_p56 major capsid protein phrog_29 major head protein head and packaging -1 37674 38699
AHB12262.1 KF626668_p62 terminase large subunit phrog_15 terminase large subunit head and packaging -1 42503 44590
AHB12222.1 KF626668_p22 hypothetical protein phrog_28977 unknown function unknown function 1 10231 10428
AHB12232.1 KF626668_p32 hypothetical protein phrog_10255 kinase other 1 15167 15913
AHB12238.1 KF626668_p38 holin-antiholin singleton unknown function unknown function -1 19118 19876
AHB12236.1 KF626668_p36 endolysin singleton unknown function unknown function -1 17879 18754
AHB12242.1 KF626668_p42 tail assembly protein phrog_19976 tail assembly protein tail -1 22098 22862
AHB12254.1 KF626668_p54 hypothetical protein phrog_4858 unknown function unknown function -1 36940 37278
AHB12221.1 KF626668_p21 hypothetical protein phrog_32201 unknown function unknown function 1 9884 10198
AHB12270.1 KF626668_p70 hypothetical protein phrog_31043 unknown function unknown function 1 51718 52035
AHB12223.1 KF626668_p23 hypothetical protein singleton unknown function unknown function 1 10521 10937
AHB12224.1 KF626668_p24 hypothetical protein phrog_4786 cysteine dioxygenase other 1 10970 11665
AHB12243.1 KF626668_p43 tail assembly protein phrog_1101 tail protein tail -1 22862 25342
AHB12252.1 KF626668_p52 virion associated protein phrog_5078 tail terminator connector -1 35815 36318
AHB12231.1 KF626668_p31 hypothetical protein singleton unknown function unknown function 1 14845 15174
AHB12227.1 KF626668_p27 hypothetical protein phrog_229 MazG-like pyrophosphatase other 1 12844 13533
AHB12216.1 KF626668_p16 hypothetical protein phrog_20256 unknown function unknown function 1 7861 8349
AHB12268.1 KF626668_p68 hypothetical protein phrog_69 exonuclease DNA, RNA and nucleotide metabolism -1 49884 51074
AHB12249.1 KF626668_p49 pre-tape measure frameshift protein GT phrog_11703 tail length tape measure protein tail -1 34177 34481
AHB12249.1 KF626668_p49 pre-tape measure frameshift protein GT phrog_11703 tail length tape measure protein tail -1 34481 34877
AHB12263.1 KF626668_p63 terminase small subunit phrog_141 terminase small subunit head and packaging -1 44583 45173
AHB12251.1 KF626668_p51 virion associated protein phrog_807 major tail protein with Ig-like domain tail -1 35001 35786
AHB12207.1 KF626668_p7 hypothetical protein singleton unknown function unknown function -1 3818 3967
AHB12246.1 KF626668_p46 tail assembly protein phrog_687 structural protein head and packaging -1 27881 28801
AHB12269.1 KF626668_p69 lipoprotein phrog_38176 unknown function unknown function -1 51138 51614
AHB12264.1 KF626668_p64 helicase phrog_62 DNA helicase DNA, RNA and nucleotide metabolism -1 45160 46566
AHB12201.1 KF626668_p1 hypothetical protein phrog_29730 unknown function unknown function -1 504 779
AHB12213.1 KF626668_p13 hypothetical protein phrog_36364 unknown function unknown function 1 5728 7368
AHB12272.1 KF626668_p72 hypothetical protein phrog_30366 unknown function unknown function 1 54625 54954
AHB12202.1 KF626668_p2 hypothetical protein singleton unknown function unknown function -1 776 1255
AHB12244.1 KF626668_p44 tail assembly protein phrog_778 tail assembly protein tail -1 25342 26163
AHB12237.1 KF626668_p37 holin-antiholin singleton unknown function unknown function -1 18751 19158
AHB12220.1 KF626668_p20 hypothetical protein phrog_29974 unknown function unknown function 1 9297 9887
AHB12265.1 KF626668_p65 Holliday-junction resolvase phrog_93 endonuclease DNA, RNA and nucleotide metabolism -1 46563 46910
AHB12259.1 KF626668_p59 scaffold protein phrog_17040 head maturation protease head and packaging -1 39244 39684
AHB12212.1 KF626668_p12 hypothetical protein phrog_32371 unknown function unknown function 1 5179 5706
AHB12257.1 KF626668_p57 decorator protein phrog_49 head decoration head and packaging -1 38760 39173
AHB12211.1 KF626668_p11 hypothetical protein phrog_31010 unknown function unknown function 1 4769 5182
AHB12235.1 KF626668_p35 i-spanin phrog_8821 Rz-like spanin lysis -1 17425 17868
AHB12241.1 KF626668_p41 tail assembly protein phrog_26999 tail assembly protein tail -1 21925 22095
AHB12208.1 KF626668_p8 hypothetical protein singleton unknown function unknown function -1 3981 4178
AHB12234.1 KF626668_p34 o-spanin singleton unknown function unknown function -1 17196 17561
AHB12218.1 KF626668_p18 hypothetical protein phrog_36834 unknown function unknown function 1 8648 8941
AHB12250.1 KF626668_p50 pre-tape measure frameshift protein G phrog_5260 tail protein tail -1 34362 34877
AHB12255.1 KF626668_p55 hypothetical protein singleton unknown function unknown function -1 37305 37592
AHB12226.1 KF626668_p26 hypothetical protein phrog_38512 unknown function unknown function 1 12359 12847
AHB12260.1 KF626668_p60 portal protein phrog_21 portal protein head and packaging -1 40595 42256
AHB12266.1 KF626668_p66 DNA polymerase I phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism -1 46907 48946
AHB12247.1 KF626668_p47 tail assembly protein phrog_687 structural protein head and packaging -1 28801 29826
AHB12217.1 KF626668_p17 hypothetical protein phrog_26100 unknown function unknown function 1 8346 8651
AHB12205.1 KF626668_p5 hypothetical protein phrog_24784 unknown function unknown function -1 2764 3192
AHB12271.1 KF626668_p71 DNA primase phrog_1156 DNA primase DNA, RNA and nucleotide metabolism 1 52039 54540
AHB12233.1 KF626668_p33 hypothetical protein phrog_6247 DNA topoisomerase DNA, RNA and nucleotide metabolism 1 15929 16810
AHB12214.1 KF626668_p14 hypothetical protein singleton unknown function unknown function 1 7372 7632
AHB12248.1 KF626668_p48 tape measure protein phrog_2335 tail length tape measure protein tail -1 29836 34173
AHB12261.1 KF626668_p61 head-to-tail joining protein phrog_75 head-tail adaptor Ad1 connector -1 42269 42499
AHB12204.1 KF626668_p4 hypothetical protein singleton unknown function unknown function -1 2261 2761
AHB12225.1 KF626668_p25 hypothetical protein phrog_28462 unknown function unknown function 1 11859 12278
AHB12206.1 KF626668_p6 hypothetical protein phrog_4273 unknown function unknown function -1 3194 3790
AHB12229.1 KF626668_p29 hypothetical protein phrog_38824 unknown function unknown function 1 13822 14400
AHB12267.1 KF626668_p67 ligase phrog_112 Gp2.5-like ssDNA binding protein and ssDNA annealing protein DNA, RNA and nucleotide metabolism -1 49019 49819
AHB12203.1 KF626668_p3 hypothetical protein singleton unknown function unknown function -1 1271 2224