| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
KF787094 |
Definition |
Achromobacter phage JWDelta, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae; Jwalphavirus; unclassified Jwalphavirus. |
DB of origin |
PVOG |
Length |
73659 |
Host Name |
Achromobacter xylosoxidans |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
89 |
%GC |
54.25 |
Number of singletons |
4 |
Number of paralogs |
2 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| AHC56584.1 | KF787094_p68 | hypothetical protein | phrog_2220 | unknown function | unknown function | -1 | 53617 | 56289 |
| AHC56594.1 | KF787094_p78 | hypothetical protein | phrog_5211 | unknown function | unknown function | -1 | 64642 | 64980 |
| AHC56587.1 | KF787094_p71 | hypothetical protein | phrog_1357 | major head protein | head and packaging | -1 | 58040 | 59263 |
| AHC56550.1 | KF787094_p34 | hypothetical protein | phrog_13631 | unknown function | unknown function | 1 | 15792 | 16160 |
| AHC56572.1 | KF787094_p56 | hypothetical protein | phrog_2139 | exonuclease | DNA, RNA and nucleotide metabolism | 1 | 33629 | 34621 |
| AHC56601.1 | KF787094_p85 | hypothetical protein | phrog_30381 | unknown function | unknown function | 1 | 71773 | 72096 |
| AHC56522.1 | KF787094_p6 | hypothetical protein | phrog_24111 | unknown function | unknown function | 1 | 1851 | 2198 |
| AHC56538.1 | KF787094_p22 | hypothetical protein | phrog_24167 | unknown function | unknown function | 1 | 10279 | 11052 |
| AHC56569.1 | KF787094_p53 | DNA polymerase I | phrog_17 | DNA polymerase | DNA, RNA and nucleotide metabolism | 1 | 30035 | 32695 |
| AHC56603.1 | KF787094_p87 | hypothetical protein | phrog_31930 | unknown function | unknown function | 1 | 72379 | 72792 |
| AHC56556.1 | KF787094_p40 | endonuclease | phrog_59 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 19185 | 19607 |
| AHC56528.1 | KF787094_p12 | hypothetical protein | phrog_2072 | unknown function | unknown function | 1 | 3415 | 3804 |
| AHC56541.1 | KF787094_p25 | hypothetical protein | phrog_20531 | unknown function | unknown function | 1 | 11938 | 12870 |
| AHC56533.1 | KF787094_p17 | hypothetical protein | phrog_2051 | RNA polymerase | DNA, RNA and nucleotide metabolism | 1 | 6122 | 6931 |
| AHC56557.1 | KF787094_p41 | hypothetical protein | phrog_22 | thioredoxin domain | DNA, RNA and nucleotide metabolism | 1 | 20410 | 20733 |
| AHC56564.1 | KF787094_p48 | hypothetical protein | phrog_2886 | RIIB lysis inhibitor | lysis | 1 | 25714 | 27318 |
| AHC56525.1 | KF787094_p9 | hypothetical protein | phrog_5005 | unknown function | unknown function | 1 | 2782 | 2994 |
| AHC56535.1 | KF787094_p19 | hypothetical protein | phrog_34947 | unknown function | unknown function | 1 | 8465 | 8953 |
| AHC56592.1 | KF787094_p76 | N-acetylmuramidase | phrog_315 | endolysin | lysis | -1 | 63805 | 64434 |
| AHC56591.1 | KF787094_p75 | hypothetical protein | phrog_6197 | Rz-like spanin | lysis | -1 | 63312 | 63824 |
| AHC56554.1 | KF787094_p38 | hypothetical protein | phrog_27287 | unknown function | unknown function | 1 | 18086 | 18244 |
| AHC56576.1 | KF787094_p60 | hypothetical protein | phrog_59 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 38380 | 38907 |
| AHC56571.1 | KF787094_p55 | hypothetical protein | phrog_9919 | unknown function | unknown function | 1 | 33117 | 33581 |
| AHC56562.1 | KF787094_p46 | thymidilate synthase | phrog_85 | thymidylate synthase | DNA, RNA and nucleotide metabolism | 1 | 22192 | 23103 |
| AHC56595.1 | KF787094_p79 | hypothetical protein | phrog_36697 | unknown function | unknown function | -1 | 65104 | 67557 |
| AHC56597.1 | KF787094_p81 | hypothetical protein | phrog_38 | terminase large subunit | head and packaging | -1 | 68274 | 69884 |
| AHC56568.1 | KF787094_p52 | hypothetical protein | phrog_4881 | unknown function | unknown function | 1 | 29502 | 30026 |
| AHC56599.1 | KF787094_p83 | hypothetical protein | phrog_3934 | unknown function | unknown function | -1 | 70600 | 71067 |
| AHC56551.1 | KF787094_p35 | hypothetical protein | phrog_1314 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 16133 | 17293 |
| AHC56590.1 | KF787094_p74 | portal protein | phrog_1216 | portal protein | head and packaging | -1 | 61015 | 63303 |
| AHC56596.1 | KF787094_p80 | hypothetical protein | phrog_2125 | virion structural protein | head and packaging | -1 | 67561 | 68265 |
| AHC56539.1 | KF787094_p23 | HNH endonuclease | phrog_1872 | endonuclease | DNA, RNA and nucleotide metabolism | 1 | 11054 | 11401 |
| AHC56543.1 | KF787094_p27 | hypothetical protein | phrog_17762 | unknown function | unknown function | 1 | 13276 | 13623 |
| AHC56540.1 | KF787094_p24 | hypothetical protein | singleton | unknown function | unknown function | 1 | 11398 | 11829 |
| AHC56530.1 | KF787094_p14 | hypothetical protein | phrog_2166 | N4-like RNA polymerase | DNA, RNA and nucleotide metabolism | 1 | 4047 | 4877 |
| AHC56552.1 | KF787094_p36 | dCTP deaminase | phrog_1663 | dCTP deaminase | DNA, RNA and nucleotide metabolism | 1 | 17323 | 17784 |
| AHC56529.1 | KF787094_p13 | hypothetical protein | phrog_35866 | unknown function | unknown function | 1 | 3804 | 4031 |
| AHC56555.1 | KF787094_p39 | hypothetical protein | phrog_30184 | unknown function | unknown function | 1 | 18452 | 18634 |
| AHC56521.1 | KF787094_p5 | hypothetical protein | phrog_28690 | unknown function | unknown function | 1 | 1569 | 1829 |
| AHC56586.1 | KF787094_p70 | hypothetical protein | phrog_2130 | unknown function | unknown function | -1 | 57271 | 57969 |
| AHC56547.1 | KF787094_p31 | hypothetical protein | phrog_21163 | unknown function | unknown function | 1 | 14327 | 14530 |
| AHC56593.1 | KF787094_p77 | hypothetical protein | phrog_1356 | holin | lysis | -1 | 64397 | 64663 |
| AHC56526.1 | KF787094_p10 | hypothetical protein | phrog_464 | unknown function | unknown function | 1 | 2998 | 3315 |
| AHC56549.1 | KF787094_p33 | hypothetical protein | phrog_19202 | unknown function | unknown function | 1 | 15587 | 15778 |
| AHC56534.1 | KF787094_p18 | hypothetical protein | singleton | unknown function | unknown function | 1 | 7006 | 8409 |
| AHC56519.1 | KF787094_p3 | hypothetical protein | phrog_36040 | unknown function | unknown function | 1 | 1223 | 1390 |
| AHC56532.1 | KF787094_p16 | hypothetical protein | phrog_1035 | endonuclease VII | DNA, RNA and nucleotide metabolism | 1 | 5424 | 5984 |
| AHC56582.1 | KF787094_p66 | hypothetical protein | phrog_6126 | virion structural protein | head and packaging | -1 | 51020 | 53071 |
| AHC56536.1 | KF787094_p20 | hypothetical protein | phrog_215 | structural protein with Ig domain | head and packaging | 1 | 8978 | 9970 |
| AHC56585.1 | KF787094_p69 | hypothetical protein | phrog_2050 | virion structural protein | head and packaging | -1 | 56293 | 57192 |
| AHC56602.1 | KF787094_p86 | hypothetical protein | phrog_23882 | unknown function | unknown function | 1 | 72093 | 72410 |
| AHC56542.1 | KF787094_p26 | hypothetical protein | phrog_17232 | unknown function | unknown function | 1 | 12941 | 13273 |
| AHC56565.1 | KF787094_p49 | hypothetical protein | phrog_6377 | unknown function | unknown function | 1 | 27354 | 27881 |
| AHC56546.1 | KF787094_p30 | hypothetical protein | singleton | unknown function | unknown function | 1 | 14176 | 14319 |
| AHC56527.1 | KF787094_p11 | hypothetical protein | phrog_36682 | unknown function | unknown function | 1 | 3305 | 3418 |
| AHC56548.1 | KF787094_p32 | hypothetical protein | phrog_1297 | ATPase | other | 1 | 14546 | 15583 |
| AHC56604.1 | KF787094_p88 | hypothetical protein | phrog_29119 | unknown function | unknown function | 1 | 72789 | 73106 |
| AHC56553.1 | KF787094_p37 | hypothetical protein | phrog_19749 | unknown function | unknown function | 1 | 17784 | 18023 |
| AHC56524.1 | KF787094_p8 | hypothetical protein | phrog_2510 | unknown function | unknown function | 1 | 2451 | 2780 |
| AHC56518.1 | KF787094_p2 | hypothetical protein | phrog_4099 | unknown function | unknown function | 1 | 655 | 1080 |
| AHC56598.1 | KF787094_p82 | hypothetical protein | phrog_2109 | unknown function | unknown function | -1 | 69877 | 70557 |
| AHC56573.1 | KF787094_p57 | DNA primase | phrog_2135 | DNA primase | DNA, RNA and nucleotide metabolism | 1 | 34618 | 36762 |
| AHC56578.1 | KF787094_p62 | endonuclease | phrog_99 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 39475 | 39966 |
| AHC56560.1 | KF787094_p44 | hypothetical protein | phrog_38162 | unknown function | unknown function | 1 | 21510 | 21725 |
| AHC56558.1 | KF787094_p42 | hypothetical protein | phrog_25795 | unknown function | unknown function | 1 | 20744 | 21322 |
| AHC56517.1 | KF787094_p1 | hypothetical protein | phrog_5020 | unknown function | unknown function | 1 | 123 | 443 |
| AHC56531.1 | KF787094_p15 | RNA polymerase subunit | phrog_20599 | RNA polymerase | DNA, RNA and nucleotide metabolism | 1 | 4912 | 5325 |
| AHC56581.1 | KF787094_p65 | RNA polymerase | phrog_2206 | virion RNA polymerase | DNA, RNA and nucleotide metabolism | -1 | 40644 | 50921 |
| AHC56580.1 | KF787094_p64 | hypothetical protein | phrog_19025 | unknown function | unknown function | 1 | 40426 | 40608 |
| AHC56545.1 | KF787094_p29 | hypothetical protein | phrog_22234 | unknown function | unknown function | 1 | 13931 | 14194 |
| AHC56563.1 | KF787094_p47 | hypothetical protein | phrog_2979 | RIIA lysis inhibitor | lysis | 1 | 23167 | 25704 |
| AHC56589.1 | KF787094_p73 | hypothetical protein | phrog_2346 | unknown function | unknown function | -1 | 60633 | 61004 |
| AHC56577.1 | KF787094_p61 | hypothetical protein | phrog_159 | RuvC-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 38904 | 39464 |
| AHC56559.1 | KF787094_p43 | hypothetical protein | phrog_23639 | unknown function | unknown function | 1 | 21322 | 21510 |
| AHC56579.1 | KF787094_p63 | hypothetical protein | phrog_18842 | unknown function | unknown function | 1 | 39984 | 40409 |
| AHC56583.1 | KF787094_p67 | hypothetical protein | phrog_16623 | unknown function | unknown function | -1 | 53083 | 53607 |
| AHC56605.1 | KF787094_p89 | hypothetical protein | phrog_5020 | unknown function | unknown function | 1 | 73348 | 73659 |
| AHC56570.1 | KF787094_p54 | hypothetical protein | phrog_5974 | unknown function | unknown function | 1 | 32692 | 33114 |
| AHC56566.1 | KF787094_p50 | hypothetical protein | phrog_671 | nucleotide pyrophosphohydrolase | other | 1 | 27673 | 28131 |
| AHC56523.1 | KF787094_p7 | hypothetical protein | phrog_24239 | unknown function | unknown function | 1 | 2195 | 2464 |
| AHC56544.1 | KF787094_p28 | hypothetical protein | phrog_24427 | unknown function | unknown function | 1 | 13629 | 13934 |
| AHC56588.1 | KF787094_p72 | tape measure protein | phrog_2120 | tail length tape measure protein | tail | -1 | 59276 | 60607 |
| AHC56574.1 | KF787094_p58 | hypothetical protein | phrog_124 | Sak4-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | 1 | 36810 | 37583 |
| AHC56520.1 | KF787094_p4 | hypothetical protein | phrog_37143 | unknown function | unknown function | 1 | 1417 | 1569 |
| AHC56561.1 | KF787094_p45 | hypothetical protein | phrog_26767 | unknown function | unknown function | 1 | 21725 | 22195 |
| AHC56537.1 | KF787094_p21 | hypothetical protein | singleton | unknown function | unknown function | 1 | 10050 | 10220 |
| AHC56575.1 | KF787094_p59 | single-stranded DNA-binding protein | phrog_743 | single strand DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 37615 | 38376 |
| AHC56600.1 | KF787094_p84 | hypothetical protein | phrog_7213 | unknown function | unknown function | 1 | 71208 | 71519 |
| AHC56567.1 | KF787094_p51 | DNA helicase | phrog_325 | Dda-like helicase | DNA, RNA and nucleotide metabolism | 1 | 28187 | 29491 |