Genomic map of Podovirus Lau218 (KJ183193)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
KJ183193
Definition
Podovirus Lau218 strain TahiMoana, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Autographiviridae; Lauvirus.
DB of origin
NUCCORE
Length
38756
Host Name
metagenomic
Host domain
Bacteria
Is prophage?
undef
Number of proteins
51
%GC
34.7
Number of singletons
2
Number of paralogs
1

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
AIA83242.1 KJ183193_p31 thymidylate synthase ThyX phrog_85 thymidylate synthase DNA, RNA and nucleotide metabolism 1 17292 17915
AIA83232.1 KJ183193_p21 hypothetical protein phrog_799 DNA methyltransferase other 1 13082 13606
AIA83219.1 KJ183193_p8 hypothetical protein phrog_24497 unknown function unknown function 1 4846 5040
AIA83228.1 KJ183193_p17 endodeoxyribonuclease phrog_34 RusA-like Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 11544 11936
AIA83230.1 KJ183193_p19 exonuclease phrog_107 exonuclease DNA, RNA and nucleotide metabolism 1 12148 12894
AIA83223.1 KJ183193_p12 DNA-directed RNA polymerase, phage-type phrog_36028 RNA polymerase DNA, RNA and nucleotide metabolism -1 6341 7285
AIA83213.1 KJ183193_p2 hypothetical protein phrog_26366 unknown function unknown function 1 2237 2377
AIA83235.1 KJ183193_p24 hypothetical protein phrog_24462 unknown function unknown function 1 15401 15658
AIA83258.1 KJ183193_p47 hypothetical protein phrog_23124 unknown function unknown function 1 30558 31100
AIA83255.1 KJ183193_p44 hypothetical protein phrog_26926 unknown function unknown function 1 29607 29948
AIA83218.1 KJ183193_p7 hypothetical protein phrog_25600 unknown function unknown function 1 4452 4817
AIA83231.1 KJ183193_p20 IQ motif-containing protein phrog_4276 unknown function unknown function 1 12864 13085
AIA83217.1 KJ183193_p6 hypothetical protein phrog_24297 unknown function unknown function 1 4233 4409
AIA83216.1 KJ183193_p5 hypothetical protein phrog_27348 unknown function unknown function 1 3998 4195
AIA83238.1 KJ183193_p27 hypothetical protein phrog_24606 unknown function unknown function 1 16431 16529
AIA83262.1 KJ183193_p51 hypothetical protein phrog_891 terminase small subunit head and packaging 1 38406 38633
AIA83250.1 KJ183193_p39 phage capsid protein phrog_267 major head protein head and packaging 1 22961 23839
AIA83241.1 KJ183193_p30 hypothetical protein phrog_25755 unknown function unknown function 1 17020 17295
AIA83240.1 KJ183193_p29 sulfur transfer protein, DsrC phrog_17249 unknown function unknown function 1 16714 17004
AIA83259.1 KJ183193_p48 hypothetical protein phrog_25560 unknown function unknown function 1 31072 33375
AIA83253.1 KJ183193_p42 phage fiber protein phrog_24456 tail fiber protein tail 1 26694 28682
AIA83233.1 KJ183193_p22 ribonucleotide reductase, large subunit singleton unknown function unknown function 1 13603 13833
AIA83248.1 KJ183193_p37 phage head-to-tail joining protein, podovirus-type phrog_449 head-tail adaptor connector 1 20510 21997
AIA83249.1 KJ183193_p38 phage capsid assembly protein phrog_1052 head assembly head and packaging 1 22067 22849
AIA83257.1 KJ183193_p46 hypothetical protein phrog_25445 unknown function unknown function 1 30295 30555
AIA83212.1 KJ183193_p1 maturase, NTPase containing phrog_38 terminase large subunit head and packaging 1 1 1719
AIA83246.1 KJ183193_p35 hypothetical protein phrog_25618 unknown function unknown function 1 20128 20292
AIA83247.1 KJ183193_p36 hypothetical protein phrog_24533 unknown function unknown function 1 20296 20499
AIA83224.1 KJ183193_p13 phage ssDNA-binding protein phrog_112 Gp2.5-like ssDNA binding protein and ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 7838 8497
AIA83236.1 KJ183193_p25 hypothetical protein phrog_22976 unknown function unknown function 1 15829 16098
AIA83214.1 KJ183193_p3 hypothetical protein phrog_20597 unknown function unknown function 1 3105 3332
AIA83215.1 KJ183193_p4 N6 adenine-specific DNA methyltransferase, N12 class phrog_799 DNA methyltransferase other 1 3381 3953
AIA83256.1 KJ183193_p45 hypothetical protein phrog_19883 unknown function unknown function 1 29945 30298
AIA83222.1 KJ183193_p11 DNA-directed RNA polymerase, phage-type phrog_2051 RNA polymerase DNA, RNA and nucleotide metabolism -1 5488 6390
AIA83225.1 KJ183193_p14 DNA primase/helicase phrog_239 DNA primase/helicase DNA, RNA and nucleotide metabolism 1 8521 10191
AIA83260.1 KJ183193_p49 hypothetical protein phrog_22060 unknown function unknown function 1 33471 36995
AIA83227.1 KJ183193_p16 DNA-directed DNA polymerase phrog_15971 DNA polymerase I DNA, RNA and nucleotide metabolism 1 10603 11544
AIA83221.1 KJ183193_p10 hypothetical protein phrog_22301 unknown function unknown function 1 5291 5491
AIA83244.1 KJ183193_p33 N6 adenine-specific DNA methyltransferase, N12 class phrog_56 DNA methyltransferase other 1 18091 19041
AIA83254.1 KJ183193_p43 phage fiber protein singleton unknown function unknown function 1 28651 29607
AIA83239.1 KJ183193_p28 hypothetical protein phrog_24559 unknown function unknown function 1 16489 16701
AIA83237.1 KJ183193_p26 hypothetical protein phrog_19180 unknown function unknown function 1 16103 16420
AIA83243.1 KJ183193_p32 FmdB family transcriptional regulator phrog_1076 FmdB-like transcriptional regulator transcription regulation 1 17915 18094
AIA83226.1 KJ183193_p15 hypothetical protein phrog_2340 endonuclease DNA, RNA and nucleotide metabolism 1 10233 10610
AIA83234.1 KJ183193_p23 ribonucleotide reductase, large subunit phrog_84 ribonucleoside-diphosphate reductase large subunit DNA, RNA and nucleotide metabolism 1 13851 15305
AIA83245.1 KJ183193_p34 ribonucleotide reductase, small subunit phrog_86 ribonucleoside diphosphate reductase small subunit DNA, RNA and nucleotide metabolism 1 19129 20106
AIA83251.1 KJ183193_p40 phage tail protein phrog_446 tail protein tail 1 23913 24485
AIA83229.1 KJ183193_p18 hypothetical protein phrog_26586 unknown function unknown function 1 11943 12137
AIA83252.1 KJ183193_p41 phage tail protein phrog_457 tail protein tail 1 24496 26697
AIA83220.1 KJ183193_p9 hypothetical protein phrog_23028 unknown function unknown function 1 5128 5298
AIA83261.1 KJ183193_p50 sulphite reductase, dissimilatory-type alpha subunit phrog_24411 unknown function unknown function 1 37008 38315